RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 PTCH1Q13635 1447 aa19.31■□□□□ 0.68
TSEN54-206ENST00000579449 KCNA6P17658 529 aa19.3■□□□□ 0.68
TSEN54-206ENST00000579449 MINK1Q8N4C8 1332 aaPredicted RBP19.29■□□□□ 0.68
TSEN54-206ENST00000579449 NWD1Q149M9 1564 aa19.29■□□□□ 0.68
TSEN54-206ENST00000579449 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
TSEN54-206ENST00000579449 TULP4Q9NRJ4 1543 aa19.27■□□□□ 0.68
TSEN54-206ENST00000579449 CDCA8Q53HL2 280 aa19.27■□□□□ 0.68
TSEN54-206ENST00000579449 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
TSEN54-206ENST00000579449 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
TSEN54-206ENST00000579449 STRCP1A6NGW2 1772 aa19.25■□□□□ 0.67
TSEN54-206ENST00000579449 DIEXFQ68CQ4 756 aaKnown RBP19.24■□□□□ 0.67
TSEN54-206ENST00000579449 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
TSEN54-206ENST00000579449 ADGRB2O60241 1585 aa19.22■□□□□ 0.67
TSEN54-206ENST00000579449 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
TSEN54-206ENST00000579449 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
TSEN54-206ENST00000579449 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
TSEN54-206ENST00000579449 CABP2Q9NPB3 220 aa19.2■□□□□ 0.66
TSEN54-206ENST00000579449 MYOM1P52179 1685 aa19.2■□□□□ 0.66
TSEN54-206ENST00000579449 WASLO00401 505 aaPredicted RBP19.19■□□□□ 0.66
TSEN54-206ENST00000579449 SRPK2P78362 688 aaKnown RBP19.19■□□□□ 0.66
TSEN54-206ENST00000579449 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
TSEN54-206ENST00000579449 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
TSEN54-206ENST00000579449 RBM33Q96EV2 1170 aaKnown RBP19.17■□□□□ 0.66
TSEN54-206ENST00000579449 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
TSEN54-206ENST00000579449 ATAD2Q6PL18 1390 aa19.15■□□□□ 0.66
TSEN54-206ENST00000579449 ADGRL3Q9HAR2 1447 aa19.14■□□□□ 0.65
TSEN54-206ENST00000579449 TMC1Q8TDI8 760 aa19.12■□□□□ 0.65
TSEN54-206ENST00000579449 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
TSEN54-206ENST00000579449 PANK3Q9H999 370 aa19.12■□□□□ 0.65
TSEN54-206ENST00000579449 FMN2Q9NZ56 1722 aa19.11■□□□□ 0.65
TSEN54-206ENST00000579449 TMEM94Q12767 1356 aa19.11■□□□□ 0.65
TSEN54-206ENST00000579449 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
TSEN54-206ENST00000579449 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
TSEN54-206ENST00000579449 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
TSEN54-206ENST00000579449 NCOA3Q9Y6Q9 1424 aa19.1■□□□□ 0.65
TSEN54-206ENST00000579449 NUDT16Q96DE0 195 aaKnown RBP19.1■□□□□ 0.65
TSEN54-206ENST00000579449 ATP7BP35670 1465 aa19.09■□□□□ 0.65
TSEN54-206ENST00000579449 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
TSEN54-206ENST00000579449 NINLQ9Y2I6 1382 aa19.09■□□□□ 0.65
TSEN54-206ENST00000579449 PRR36Q9H6K5 1346 aa19.09■□□□□ 0.65
TSEN54-206ENST00000579449 USP32Q8NFA0 1604 aa19.09■□□□□ 0.65
TSEN54-206ENST00000579449 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
TSEN54-206ENST00000579449 LRRC7Q96NW7 1537 aa19.08■□□□□ 0.64
TSEN54-206ENST00000579449 TOPAZ1Q8N9V7 1692 aa19.08■□□□□ 0.64
TSEN54-206ENST00000579449 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
TSEN54-206ENST00000579449 CCDC61Q9Y6R9 512 aa19.07■□□□□ 0.64
TSEN54-206ENST00000579449 ITSN1Q15811 1721 aa19.06■□□□□ 0.64
TSEN54-206ENST00000579449 C19orf44Q9H6X5 657 aa19.06■□□□□ 0.64
TSEN54-206ENST00000579449 PPIP5K1Q6PFW1 1433 aa19.06■□□□□ 0.64
TSEN54-206ENST00000579449 PER1O15534 1290 aaPredicted RBP19.05■□□□□ 0.64
TSEN54-206ENST00000579449 ANKARQ7Z5J8 1434 aa19.05■□□□□ 0.64
TSEN54-206ENST00000579449 ANKRD36BQ8N2N9 1353 aa19.05■□□□□ 0.64
TSEN54-206ENST00000579449 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
TSEN54-206ENST00000579449 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
TSEN54-206ENST00000579449 TERF2IPQ9NYB0 399 aa19.02■□□□□ 0.64
TSEN54-206ENST00000579449 AKAP12Q02952 1782 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 DCCP43146 1447 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 ANP32CO43423 234 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
TSEN54-206ENST00000579449 MIER1Q8N108 512 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 KNSTRNQ9Y448 316 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 MSH6P52701 1360 aa19.01■□□□□ 0.63
TSEN54-206ENST00000579449 PLEKHG3A1L390 1219 aa19■□□□□ 0.63
TSEN54-206ENST00000579449 ATF3P18847 181 aa19■□□□□ 0.63
TSEN54-206ENST00000579449 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
TSEN54-206ENST00000579449 CPSF1Q10570 1443 aaKnown RBP18.99■□□□□ 0.63
TSEN54-206ENST00000579449 MON2Q7Z3U7 1717 aa18.97■□□□□ 0.63
TSEN54-206ENST00000579449 CNGB1Q14028 1251 aaPredicted RBP18.97■□□□□ 0.63
TSEN54-206ENST00000579449 CADPS2Q86UW7 1296 aa18.97■□□□□ 0.63
TSEN54-206ENST00000579449 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
TSEN54-206ENST00000579449 ACEP12821 1306 aa18.97■□□□□ 0.63
TSEN54-206ENST00000579449 AMER1Q5JTC6 1135 aaPredicted RBP18.96■□□□□ 0.63
TSEN54-206ENST00000579449 MST1RQ04912 1400 aa18.96■□□□□ 0.63
TSEN54-206ENST00000579449 C1orf167Q5SNV9 1468 aa18.96■□□□□ 0.63
TSEN54-206ENST00000579449 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
TSEN54-206ENST00000579449 ZNF692Q9BU19 519 aaPredicted RBP18.95■□□□□ 0.62
TSEN54-206ENST00000579449 PRKRIP1Q9H875 184 aaPredicted RBP18.95■□□□□ 0.62
TSEN54-206ENST00000579449 PHF8Q9UPP1 1060 aa18.95■□□□□ 0.62
TSEN54-206ENST00000579449 ESCO1Q5FWF5 840 aa18.94■□□□□ 0.62
TSEN54-206ENST00000579449 CC2D1BQ5T0F9 858 aaKnown RBP18.94■□□□□ 0.62
TSEN54-206ENST00000579449 POLR3AO14802 1390 aaPredicted RBP18.93■□□□□ 0.62
TSEN54-206ENST00000579449 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
TSEN54-206ENST00000579449 NGDNQ8NEJ9 315 aaKnown RBP18.93■□□□□ 0.62
TSEN54-206ENST00000579449 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
TSEN54-206ENST00000579449 EDC4Q6P2E9 1401 aaKnown RBP18.92■□□□□ 0.62
TSEN54-206ENST00000579449 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
TSEN54-206ENST00000579449 KIF20BQ96Q89 1820 aa18.91■□□□□ 0.62
TSEN54-206ENST00000579449 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
TSEN54-206ENST00000579449 USP6P35125 1406 aa18.91■□□□□ 0.62
TSEN54-206ENST00000579449 NRKQ7Z2Y5 1582 aa18.9■□□□□ 0.62
TSEN54-206ENST00000579449 RALBP1Q15311 655 aa18.89■□□□□ 0.61
TSEN54-206ENST00000579449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.61
TSEN54-206ENST00000579449 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
TSEN54-206ENST00000579449 NSD2O96028 1365 aa18.87■□□□□ 0.61
TSEN54-206ENST00000579449 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
TSEN54-206ENST00000579449 SLAIN2Q9P270 581 aa18.87■□□□□ 0.61
TSEN54-206ENST00000579449 ANKRD26Q9UPS8 1709 aa18.87■□□□□ 0.61
TSEN54-206ENST00000579449 SSH2Q76I76 1423 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms