RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
CASC3-206ENST00000579238 PPLO60437 1756 aa12.86□□□□□ -0.35
CASC3-206ENST00000579238 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
CASC3-206ENST00000579238 COL22A1Q8NFW1 1626 aaPredicted RBP12.86□□□□□ -0.35
CASC3-206ENST00000579238 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
CASC3-206ENST00000579238 MYOM2P54296 1465 aa12.85□□□□□ -0.35
CASC3-206ENST00000579238 ATRNO75882 1429 aa12.85□□□□□ -0.35
CASC3-206ENST00000579238 ADGRF5Q8IZF2 1346 aa12.85□□□□□ -0.35
CASC3-206ENST00000579238 PXDNQ92626 1479 aa12.84□□□□□ -0.35
CASC3-206ENST00000579238 LRPPRCP42704 1394 aaKnown RBP12.83□□□□□ -0.36
CASC3-206ENST00000579238 CCDC144AA2RUR9 1427 aa12.83□□□□□ -0.36
CASC3-206ENST00000579238 TECPR2O15040 1411 aa12.83□□□□□ -0.36
CASC3-206ENST00000579238 FOXO3O43524 673 aa12.83□□□□□ -0.36
CASC3-206ENST00000579238 FOXD1Q16676 465 aa12.83□□□□□ -0.36
CASC3-206ENST00000579238 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
CASC3-206ENST00000579238 ANKRD30BQ9BXX2 1392 aa12.82□□□□□ -0.36
CASC3-206ENST00000579238 RGL3Q3MIN7 710 aa12.82□□□□□ -0.36
CASC3-206ENST00000579238 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
CASC3-206ENST00000579238 STK26Q9P289 416 aa12.82□□□□□ -0.36
CASC3-206ENST00000579238 SPATA31E1Q6ZUB1 1445 aa12.81□□□□□ -0.36
CASC3-206ENST00000579238 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
CASC3-206ENST00000579238 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
CASC3-206ENST00000579238 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
CASC3-206ENST00000579238 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
CASC3-206ENST00000579238 CCDC125Q86Z20 511 aa12.79□□□□□ -0.36
CASC3-206ENST00000579238 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
CASC3-206ENST00000579238 MPHOSPH9Q99550 1183 aa12.79□□□□□ -0.36
CASC3-206ENST00000579238 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
CASC3-206ENST00000579238 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
CASC3-206ENST00000579238 KNDC1Q76NI1 1749 aa12.78□□□□□ -0.36
CASC3-206ENST00000579238 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
CASC3-206ENST00000579238 MARF1Q9Y4F3 1742 aaKnown RBP12.77□□□□□ -0.36
CASC3-206ENST00000579238 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
CASC3-206ENST00000579238 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
CASC3-206ENST00000579238 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
CASC3-206ENST00000579238 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
CASC3-206ENST00000579238 IFT172Q9UG01 1749 aa12.76□□□□□ -0.37
CASC3-206ENST00000579238 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
CASC3-206ENST00000579238 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
CASC3-206ENST00000579238 EP400Q96L91 3159 aa12.75□□□□□ -0.37
CASC3-206ENST00000579238 SLIT2O94813 1529 aa12.75□□□□□ -0.37
CASC3-206ENST00000579238 KIF1AQ12756 1690 aa12.75□□□□□ -0.37
CASC3-206ENST00000579238 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
CASC3-206ENST00000579238 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
CASC3-206ENST00000579238 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
CASC3-206ENST00000579238 RALGAPBQ86X10 1494 aa12.73□□□□□ -0.37
CASC3-206ENST00000579238 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
CASC3-206ENST00000579238 PSME1Q06323 249 aa12.73□□□□□ -0.37
CASC3-206ENST00000579238 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
CASC3-206ENST00000579238 TNS3Q68CZ2 1445 aa12.72□□□□□ -0.37
CASC3-206ENST00000579238 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
CASC3-206ENST00000579238 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
CASC3-206ENST00000579238 GLI3P10071 1580 aa12.72□□□□□ -0.37
CASC3-206ENST00000579238 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
CASC3-206ENST00000579238 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
CASC3-206ENST00000579238 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
CASC3-206ENST00000579238 CFAP70Q5T0N1 1121 aa12.71□□□□□ -0.37
CASC3-206ENST00000579238 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.38
CASC3-206ENST00000579238 VPS72Q15906 364 aa12.7□□□□□ -0.38
CASC3-206ENST00000579238 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
CASC3-206ENST00000579238 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
CASC3-206ENST00000579238 CABLES1Q8TDN4 633 aa12.69□□□□□ -0.38
CASC3-206ENST00000579238 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
CASC3-206ENST00000579238 SAFB2Q14151 953 aaKnown RBP eCLIP12.68□□□□□ -0.38
CASC3-206ENST00000579238 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
CASC3-206ENST00000579238 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
CASC3-206ENST00000579238 SF3B2Q13435 895 aaKnown RBP12.67□□□□□ -0.38
CASC3-206ENST00000579238 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
CASC3-206ENST00000579238 POGKQ9P215 609 aa12.67□□□□□ -0.38
CASC3-206ENST00000579238 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
CASC3-206ENST00000579238 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
CASC3-206ENST00000579238 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
CASC3-206ENST00000579238 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
CASC3-206ENST00000579238 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
CASC3-206ENST00000579238 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
CASC3-206ENST00000579238 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
CASC3-206ENST00000579238 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
CASC3-206ENST00000579238 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
CASC3-206ENST00000579238 PMFBP1Q8TBY8 1022 aa12.65□□□□□ -0.38
CASC3-206ENST00000579238 PLCH1Q4KWH8 1693 aa12.64□□□□□ -0.39
CASC3-206ENST00000579238 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
CASC3-206ENST00000579238 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
CASC3-206ENST00000579238 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
CASC3-206ENST00000579238 ADGRB1O14514 1584 aa12.62□□□□□ -0.39
CASC3-206ENST00000579238 GPRASP1Q5JY77 1395 aa12.62□□□□□ -0.39
CASC3-206ENST00000579238 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
CASC3-206ENST00000579238 A0A0G2JS52 829 aa12.61□□□□□ -0.39
CASC3-206ENST00000579238 MYT1Q01538 1121 aa12.61□□□□□ -0.39
CASC3-206ENST00000579238 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
CASC3-206ENST00000579238 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
CASC3-206ENST00000579238 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
CASC3-206ENST00000579238 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
CASC3-206ENST00000579238 TRPM3Q9HCF6 1732 aaPredicted RBP12.6□□□□□ -0.39
CASC3-206ENST00000579238 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
CASC3-206ENST00000579238 BAG6P46379 1132 aa12.6□□□□□ -0.39
CASC3-206ENST00000579238 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
CASC3-206ENST00000579238 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
CASC3-206ENST00000579238 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
CASC3-206ENST00000579238 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
CASC3-206ENST00000579238 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms