RNA–Protein interactions for RNA: ENST00000579214.1

TTC39C-206, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-206ENST00000579214 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.23
TTC39C-206ENST00000579214 FAM135BQ49AJ0 1406 aa13.58□□□□□ -0.24
TTC39C-206ENST00000579214 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
TTC39C-206ENST00000579214 TMF1P82094 1093 aa13.55□□□□□ -0.24
TTC39C-206ENST00000579214 SIRT1Q96EB6 747 aa13.55□□□□□ -0.24
TTC39C-206ENST00000579214 TESK2Q96S53 571 aa13.54□□□□□ -0.24
TTC39C-206ENST00000579214 TMEM94Q12767 1356 aa13.54□□□□□ -0.24
TTC39C-206ENST00000579214 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
TTC39C-206ENST00000579214 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
TTC39C-206ENST00000579214 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
TTC39C-206ENST00000579214 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
TTC39C-206ENST00000579214 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
TTC39C-206ENST00000579214 ADGRL3Q9HAR2 1447 aa13.52□□□□□ -0.25
TTC39C-206ENST00000579214 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
TTC39C-206ENST00000579214 NALCNQ8IZF0 1738 aa13.52□□□□□ -0.25
TTC39C-206ENST00000579214 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
TTC39C-206ENST00000579214 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
TTC39C-206ENST00000579214 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
TTC39C-206ENST00000579214 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
TTC39C-206ENST00000579214 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
TTC39C-206ENST00000579214 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
TTC39C-206ENST00000579214 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
TTC39C-206ENST00000579214 MSH6P52701 1360 aa13.49□□□□□ -0.25
TTC39C-206ENST00000579214 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
TTC39C-206ENST00000579214 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
TTC39C-206ENST00000579214 C11orf95C9JLR9 678 aaPredicted RBP13.49□□□□□ -0.25
TTC39C-206ENST00000579214 WASLO00401 505 aaPredicted RBP13.49□□□□□ -0.25
TTC39C-206ENST00000579214 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
TTC39C-206ENST00000579214 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
TTC39C-206ENST00000579214 ATF3P18847 181 aa13.47□□□□□ -0.25
TTC39C-206ENST00000579214 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
TTC39C-206ENST00000579214 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
TTC39C-206ENST00000579214 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
TTC39C-206ENST00000579214 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
TTC39C-206ENST00000579214 C19orf44Q9H6X5 657 aa13.46□□□□□ -0.25
TTC39C-206ENST00000579214 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
TTC39C-206ENST00000579214 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
TTC39C-206ENST00000579214 DCCP43146 1447 aa13.43□□□□□ -0.26
TTC39C-206ENST00000579214 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
TTC39C-206ENST00000579214 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
TTC39C-206ENST00000579214 ATP7BP35670 1465 aa13.42□□□□□ -0.26
TTC39C-206ENST00000579214 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
TTC39C-206ENST00000579214 PPIP5K1Q6PFW1 1433 aa13.41□□□□□ -0.26
TTC39C-206ENST00000579214 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
TTC39C-206ENST00000579214 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
TTC39C-206ENST00000579214 ITSN1Q15811 1721 aa13.41□□□□□ -0.26
TTC39C-206ENST00000579214 MYOM1P52179 1685 aa13.4□□□□□ -0.26
TTC39C-206ENST00000579214 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
TTC39C-206ENST00000579214 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
TTC39C-206ENST00000579214 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
TTC39C-206ENST00000579214 RGPD8O14715 1765 aaPredicted RBP13.4□□□□□ -0.26
TTC39C-206ENST00000579214 MST1RQ04912 1400 aa13.39□□□□□ -0.27
TTC39C-206ENST00000579214 ESCO1Q5FWF5 840 aa13.39□□□□□ -0.27
TTC39C-206ENST00000579214 CABP1Q9NZU7 370 aa13.39□□□□□ -0.27
TTC39C-206ENST00000579214 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
TTC39C-206ENST00000579214 C1orf167Q5SNV9 1468 aa13.39□□□□□ -0.27
TTC39C-206ENST00000579214 TOPAZ1Q8N9V7 1692 aa13.39□□□□□ -0.27
TTC39C-206ENST00000579214 NINLQ9Y2I6 1382 aa13.38□□□□□ -0.27
TTC39C-206ENST00000579214 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
TTC39C-206ENST00000579214 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
TTC39C-206ENST00000579214 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
TTC39C-206ENST00000579214 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
TTC39C-206ENST00000579214 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
TTC39C-206ENST00000579214 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
TTC39C-206ENST00000579214 PANK3Q9H999 370 aa13.36□□□□□ -0.27
TTC39C-206ENST00000579214 TERF2IPQ9NYB0 399 aa13.36□□□□□ -0.27
TTC39C-206ENST00000579214 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
TTC39C-206ENST00000579214 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
TTC39C-206ENST00000579214 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
TTC39C-206ENST00000579214 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
TTC39C-206ENST00000579214 ACEP12821 1306 aa13.35□□□□□ -0.27
TTC39C-206ENST00000579214 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
TTC39C-206ENST00000579214 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
TTC39C-206ENST00000579214 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
TTC39C-206ENST00000579214 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
TTC39C-206ENST00000579214 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
TTC39C-206ENST00000579214 TOM1O60784 492 aa13.33□□□□□ -0.28
TTC39C-206ENST00000579214 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
TTC39C-206ENST00000579214 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.28
TTC39C-206ENST00000579214 PLEKHG3A1L390 1219 aa13.32□□□□□ -0.28
TTC39C-206ENST00000579214 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
TTC39C-206ENST00000579214 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
TTC39C-206ENST00000579214 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
TTC39C-206ENST00000579214 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
TTC39C-206ENST00000579214 AKAP12Q02952 1782 aa13.31□□□□□ -0.28
TTC39C-206ENST00000579214 FOXO3O43524 673 aa13.31□□□□□ -0.28
TTC39C-206ENST00000579214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
TTC39C-206ENST00000579214 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
TTC39C-206ENST00000579214 PSME1Q06323 249 aa13.3□□□□□ -0.28
TTC39C-206ENST00000579214 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
TTC39C-206ENST00000579214 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
TTC39C-206ENST00000579214 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
TTC39C-206ENST00000579214 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
TTC39C-206ENST00000579214 USP6P35125 1406 aa13.3□□□□□ -0.28
TTC39C-206ENST00000579214 DIEXFQ68CQ4 756 aaKnown RBP13.29□□□□□ -0.28
TTC39C-206ENST00000579214 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
TTC39C-206ENST00000579214 NPHP3Q7Z494 1330 aa13.29□□□□□ -0.28
TTC39C-206ENST00000579214 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
TTC39C-206ENST00000579214 EDC4Q6P2E9 1401 aaKnown RBP13.29□□□□□ -0.28
TTC39C-206ENST00000579214 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms