RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
BRIP1-204ENST00000579028 CCDC125Q86Z20 511 aa13.4□□□□□ -0.26
BRIP1-204ENST00000579028 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
BRIP1-204ENST00000579028 CLTCL1P53675 1640 aa13.39□□□□□ -0.27
BRIP1-204ENST00000579028 MYOM2P54296 1465 aa13.39□□□□□ -0.27
BRIP1-204ENST00000579028 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
BRIP1-204ENST00000579028 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
BRIP1-204ENST00000579028 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
BRIP1-204ENST00000579028 KIF1BO60333 1816 aa13.36□□□□□ -0.27
BRIP1-204ENST00000579028 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
BRIP1-204ENST00000579028 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.34□□□□□ -0.27
BRIP1-204ENST00000579028 PXDNQ92626 1479 aa13.34□□□□□ -0.27
BRIP1-204ENST00000579028 NPHP3Q7Z494 1330 aa13.34□□□□□ -0.27
BRIP1-204ENST00000579028 CDC42BPGQ6DT37 1551 aa13.33□□□□□ -0.28
BRIP1-204ENST00000579028 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
BRIP1-204ENST00000579028 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
BRIP1-204ENST00000579028 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
BRIP1-204ENST00000579028 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
BRIP1-204ENST00000579028 GLI3P10071 1580 aa13.31□□□□□ -0.28
BRIP1-204ENST00000579028 ITGAEP38570 1179 aa13.3□□□□□ -0.28
BRIP1-204ENST00000579028 SLIT2O94813 1529 aa13.29□□□□□ -0.28
BRIP1-204ENST00000579028 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
BRIP1-204ENST00000579028 RPGRIP1LQ68CZ1 1315 aa13.29□□□□□ -0.28
BRIP1-204ENST00000579028 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
BRIP1-204ENST00000579028 LRP5O75197 1615 aa13.28□□□□□ -0.28
BRIP1-204ENST00000579028 PPLO60437 1756 aa13.28□□□□□ -0.28
BRIP1-204ENST00000579028 FOXO3O43524 673 aa13.28□□□□□ -0.28
BRIP1-204ENST00000579028 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
BRIP1-204ENST00000579028 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
BRIP1-204ENST00000579028 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.29
BRIP1-204ENST00000579028 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.29
BRIP1-204ENST00000579028 EP400Q96L91 3159 aa13.26□□□□□ -0.29
BRIP1-204ENST00000579028 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
BRIP1-204ENST00000579028 NAIPQ13075 1403 aa13.26□□□□□ -0.29
BRIP1-204ENST00000579028 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
BRIP1-204ENST00000579028 TECPR2O15040 1411 aa13.25□□□□□ -0.29
BRIP1-204ENST00000579028 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
BRIP1-204ENST00000579028 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
BRIP1-204ENST00000579028 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
BRIP1-204ENST00000579028 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
BRIP1-204ENST00000579028 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
BRIP1-204ENST00000579028 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
BRIP1-204ENST00000579028 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
BRIP1-204ENST00000579028 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
BRIP1-204ENST00000579028 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
BRIP1-204ENST00000579028 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
BRIP1-204ENST00000579028 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
BRIP1-204ENST00000579028 VPS72Q15906 364 aa13.21□□□□□ -0.29
BRIP1-204ENST00000579028 NWD2Q9ULI1 1742 aa13.21□□□□□ -0.3
BRIP1-204ENST00000579028 ABCC11Q96J66 1382 aa13.2□□□□□ -0.3
BRIP1-204ENST00000579028 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
BRIP1-204ENST00000579028 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
BRIP1-204ENST00000579028 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
BRIP1-204ENST00000579028 RRBP1Q9P2E9 1410 aaKnown RBP13.19□□□□□ -0.3
BRIP1-204ENST00000579028 PLEKHH1Q9ULM0 1364 aa13.19□□□□□ -0.3
BRIP1-204ENST00000579028 ADGRF5Q8IZF2 1346 aa13.18□□□□□ -0.3
BRIP1-204ENST00000579028 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
BRIP1-204ENST00000579028 TNS3Q68CZ2 1445 aa13.18□□□□□ -0.3
BRIP1-204ENST00000579028 ABCA3Q99758 1704 aa13.18□□□□□ -0.3
BRIP1-204ENST00000579028 STK26Q9P289 416 aa13.17□□□□□ -0.3
BRIP1-204ENST00000579028 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
BRIP1-204ENST00000579028 HRCP23327 699 aa13.16□□□□□ -0.3
BRIP1-204ENST00000579028 BAG6P46379 1132 aa13.16□□□□□ -0.3
BRIP1-204ENST00000579028 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
BRIP1-204ENST00000579028 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
BRIP1-204ENST00000579028 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
BRIP1-204ENST00000579028 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
BRIP1-204ENST00000579028 CABLES1Q8TDN4 633 aa13.15□□□□□ -0.3
BRIP1-204ENST00000579028 ANKRD30BQ9BXX2 1392 aa13.15□□□□□ -0.3
BRIP1-204ENST00000579028 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
BRIP1-204ENST00000579028 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
BRIP1-204ENST00000579028 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
BRIP1-204ENST00000579028 PSME1Q06323 249 aa13.14□□□□□ -0.31
BRIP1-204ENST00000579028 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
BRIP1-204ENST00000579028 PHF8Q9UPP1 1060 aa13.14□□□□□ -0.31
BRIP1-204ENST00000579028 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
BRIP1-204ENST00000579028 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
BRIP1-204ENST00000579028 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
BRIP1-204ENST00000579028 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
BRIP1-204ENST00000579028 ARHGEF10O15013 1369 aa13.13□□□□□ -0.31
BRIP1-204ENST00000579028 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
BRIP1-204ENST00000579028 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
BRIP1-204ENST00000579028 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
BRIP1-204ENST00000579028 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
BRIP1-204ENST00000579028 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
BRIP1-204ENST00000579028 FAM83GA6ND36 823 aa13.11□□□□□ -0.31
BRIP1-204ENST00000579028 DISP2A7MBM2 1401 aa13.11□□□□□ -0.31
BRIP1-204ENST00000579028 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
BRIP1-204ENST00000579028 A0A0G2JS52 829 aa13.09□□□□□ -0.31
BRIP1-204ENST00000579028 MYT1Q01538 1121 aa13.09□□□□□ -0.31
BRIP1-204ENST00000579028 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
BRIP1-204ENST00000579028 EN1Q05925 392 aaPredicted RBP13.09□□□□□ -0.31
BRIP1-204ENST00000579028 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
BRIP1-204ENST00000579028 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
BRIP1-204ENST00000579028 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
BRIP1-204ENST00000579028 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
BRIP1-204ENST00000579028 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
BRIP1-204ENST00000579028 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
BRIP1-204ENST00000579028 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
BRIP1-204ENST00000579028 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms