RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 ANP32AP39687 249 aaKnown RBP13.32□□□□□ -0.28
RTTN-202ENST00000578780 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
RTTN-202ENST00000578780 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
RTTN-202ENST00000578780 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
RTTN-202ENST00000578780 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
RTTN-202ENST00000578780 NEFMP07197 916 aa13.31□□□□□ -0.28
RTTN-202ENST00000578780 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
RTTN-202ENST00000578780 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
RTTN-202ENST00000578780 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
RTTN-202ENST00000578780 KNSTRNQ9Y448 316 aa13.31□□□□□ -0.28
RTTN-202ENST00000578780 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
RTTN-202ENST00000578780 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
RTTN-202ENST00000578780 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
RTTN-202ENST00000578780 MYOM1P52179 1685 aa13.3□□□□□ -0.28
RTTN-202ENST00000578780 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
RTTN-202ENST00000578780 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
RTTN-202ENST00000578780 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
RTTN-202ENST00000578780 BRD4O60885 1362 aaPredicted RBP13.28□□□□□ -0.28
RTTN-202ENST00000578780 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.28
RTTN-202ENST00000578780 EVC2Q86UK5 1308 aa13.27□□□□□ -0.28
RTTN-202ENST00000578780 NLRP13Q86W25 1043 aa13.27□□□□□ -0.28
RTTN-202ENST00000578780 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
RTTN-202ENST00000578780 TMEM2Q9UHN6 1383 aa13.27□□□□□ -0.29
RTTN-202ENST00000578780 C3P01024 1663 aa13.27□□□□□ -0.29
RTTN-202ENST00000578780 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
RTTN-202ENST00000578780 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
RTTN-202ENST00000578780 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
RTTN-202ENST00000578780 POGKQ9P215 609 aa13.27□□□□□ -0.29
RTTN-202ENST00000578780 PTPRMP28827 1452 aa13.26□□□□□ -0.29
RTTN-202ENST00000578780 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
RTTN-202ENST00000578780 FAM43AQ8N2R8 423 aa13.25□□□□□ -0.29
RTTN-202ENST00000578780 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
RTTN-202ENST00000578780 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
RTTN-202ENST00000578780 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
RTTN-202ENST00000578780 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
RTTN-202ENST00000578780 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
RTTN-202ENST00000578780 GSE1Q14687 1217 aa13.24□□□□□ -0.29
RTTN-202ENST00000578780 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
RTTN-202ENST00000578780 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
RTTN-202ENST00000578780 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
RTTN-202ENST00000578780 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
RTTN-202ENST00000578780 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
RTTN-202ENST00000578780 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
RTTN-202ENST00000578780 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
RTTN-202ENST00000578780 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
RTTN-202ENST00000578780 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
RTTN-202ENST00000578780 FGD1P98174 961 aa13.22□□□□□ -0.29
RTTN-202ENST00000578780 METP08581 1390 aa13.22□□□□□ -0.29
RTTN-202ENST00000578780 ABCC11Q96J66 1382 aa13.21□□□□□ -0.29
RTTN-202ENST00000578780 LTKP29376 864 aa13.21□□□□□ -0.29
RTTN-202ENST00000578780 AAMPQ13685 434 aa13.21□□□□□ -0.29
RTTN-202ENST00000578780 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
RTTN-202ENST00000578780 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.3
RTTN-202ENST00000578780 DLC1Q96QB1 1528 aa13.2□□□□□ -0.3
RTTN-202ENST00000578780 PPP2R1AP30153 589 aa13.2□□□□□ -0.3
RTTN-202ENST00000578780 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
RTTN-202ENST00000578780 ZBED9Q6R2W3 1325 aa13.2□□□□□ -0.3
RTTN-202ENST00000578780 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
RTTN-202ENST00000578780 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
RTTN-202ENST00000578780 PLEKHG1Q9ULL1 1385 aa13.18□□□□□ -0.3
RTTN-202ENST00000578780 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
RTTN-202ENST00000578780 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
RTTN-202ENST00000578780 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
RTTN-202ENST00000578780 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
RTTN-202ENST00000578780 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
RTTN-202ENST00000578780 ATAD2Q6PL18 1390 aa13.17□□□□□ -0.3
RTTN-202ENST00000578780 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
RTTN-202ENST00000578780 SLIT1O75093 1534 aa13.16□□□□□ -0.3
RTTN-202ENST00000578780 PDE4CQ08493 712 aa13.16□□□□□ -0.3
RTTN-202ENST00000578780 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
RTTN-202ENST00000578780 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
RTTN-202ENST00000578780 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
RTTN-202ENST00000578780 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
RTTN-202ENST00000578780 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
RTTN-202ENST00000578780 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
RTTN-202ENST00000578780 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
RTTN-202ENST00000578780 TECPR2O15040 1411 aa13.14□□□□□ -0.31
RTTN-202ENST00000578780 FAM135BQ49AJ0 1406 aa13.14□□□□□ -0.31
RTTN-202ENST00000578780 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
RTTN-202ENST00000578780 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
RTTN-202ENST00000578780 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
RTTN-202ENST00000578780 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
RTTN-202ENST00000578780 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
RTTN-202ENST00000578780 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
RTTN-202ENST00000578780 TERF2IPQ9NYB0 399 aa13.12□□□□□ -0.31
RTTN-202ENST00000578780 MED14O60244 1454 aa13.12□□□□□ -0.31
RTTN-202ENST00000578780 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
RTTN-202ENST00000578780 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
RTTN-202ENST00000578780 CABP1Q9NZU7 370 aa13.12□□□□□ -0.31
RTTN-202ENST00000578780 CPS1P31327 1500 aa13.11□□□□□ -0.31
RTTN-202ENST00000578780 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
RTTN-202ENST00000578780 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
RTTN-202ENST00000578780 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
RTTN-202ENST00000578780 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
RTTN-202ENST00000578780 HDGFL2Q7Z4V5 671 aaPredicted RBP13.1□□□□□ -0.31
RTTN-202ENST00000578780 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
RTTN-202ENST00000578780 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
RTTN-202ENST00000578780 INSRP06213 1382 aa13.09□□□□□ -0.31
RTTN-202ENST00000578780 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
RTTN-202ENST00000578780 RRAGDQ9NQL2 400 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms