RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 BCANQ96GW7 911 aa14.87□□□□□ -0.03
SKA2-204ENST00000578519 EID1Q9Y6B2 187 aa14.87□□□□□ -0.03
SKA2-204ENST00000578519 ALKQ9UM73 1620 aa14.86□□□□□ -0.03
SKA2-204ENST00000578519 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
SKA2-204ENST00000578519 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
SKA2-204ENST00000578519 QRICH2Q9H0J4 1663 aa14.86□□□□□ -0.03
SKA2-204ENST00000578519 CGNL1Q0VF96 1302 aa14.86□□□□□ -0.03
SKA2-204ENST00000578519 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
SKA2-204ENST00000578519 NSD2O96028 1365 aa14.85□□□□□ -0.03
SKA2-204ENST00000578519 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
SKA2-204ENST00000578519 DLC1Q96QB1 1528 aa14.84□□□□□ -0.03
SKA2-204ENST00000578519 PRAM1Q96QH2 718 aa14.84□□□□□ -0.03
SKA2-204ENST00000578519 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
SKA2-204ENST00000578519 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
SKA2-204ENST00000578519 MORC1Q86VD1 984 aa14.83□□□□□ -0.04
SKA2-204ENST00000578519 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
SKA2-204ENST00000578519 NGEFQ8N5V2 710 aa14.83□□□□□ -0.04
SKA2-204ENST00000578519 ANKRD36BQ8N2N9 1353 aa14.83□□□□□ -0.04
SKA2-204ENST00000578519 TMEM2Q9UHN6 1383 aa14.83□□□□□ -0.04
SKA2-204ENST00000578519 FKBP8Q14318 412 aa14.82□□□□□ -0.04
SKA2-204ENST00000578519 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
SKA2-204ENST00000578519 ARHGEF28Q8N1W1 1705 aaKnown RBP14.81□□□□□ -0.04
SKA2-204ENST00000578519 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
SKA2-204ENST00000578519 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
SKA2-204ENST00000578519 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
SKA2-204ENST00000578519 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
SKA2-204ENST00000578519 MYOM1P52179 1685 aa14.81□□□□□ -0.04
SKA2-204ENST00000578519 CARD14Q9BXL6 1004 aa14.8□□□□□ -0.04
SKA2-204ENST00000578519 PTPRMP28827 1452 aa14.79□□□□□ -0.04
SKA2-204ENST00000578519 SAFB2Q14151 953 aaKnown RBP eCLIP14.79□□□□□ -0.04
SKA2-204ENST00000578519 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
SKA2-204ENST00000578519 NSD3Q9BZ95 1437 aa14.79□□□□□ -0.04
SKA2-204ENST00000578519 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
SKA2-204ENST00000578519 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
SKA2-204ENST00000578519 FAM135BQ49AJ0 1406 aa14.78□□□□□ -0.04
SKA2-204ENST00000578519 PLEKHG1Q9ULL1 1385 aa14.78□□□□□ -0.04
SKA2-204ENST00000578519 TXNDC2Q86VQ3 553 aa14.78□□□□□ -0.04
SKA2-204ENST00000578519 CDK19Q9BWU1 502 aa14.78□□□□□ -0.04
SKA2-204ENST00000578519 CABP2Q9NPB3 220 aa14.78□□□□□ -0.04
SKA2-204ENST00000578519 TULP4Q9NRJ4 1543 aa14.76□□□□□ -0.05
SKA2-204ENST00000578519 BLMP54132 1417 aaPredicted RBP14.75□□□□□ -0.05
SKA2-204ENST00000578519 POLR3AO14802 1390 aaPredicted RBP14.74□□□□□ -0.05
SKA2-204ENST00000578519 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
SKA2-204ENST00000578519 TBX22Q9Y458 520 aa14.74□□□□□ -0.05
SKA2-204ENST00000578519 TECPR2O15040 1411 aa14.74□□□□□ -0.05
SKA2-204ENST00000578519 UBR1Q8IWV7 1749 aa14.73□□□□□ -0.05
SKA2-204ENST00000578519 WASLO00401 505 aaPredicted RBP14.73□□□□□ -0.05
SKA2-204ENST00000578519 CEBPAP49715 358 aaPredicted RBP14.73□□□□□ -0.05
SKA2-204ENST00000578519 ADAMTS8Q9UP79 889 aa14.73□□□□□ -0.05
SKA2-204ENST00000578519 FER1L4A9Z1Z3 1794 aa14.71□□□□□ -0.05
SKA2-204ENST00000578519 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
SKA2-204ENST00000578519 SLIT1O75093 1534 aa14.71□□□□□ -0.06
SKA2-204ENST00000578519 WAPLQ7Z5K2 1190 aa14.7□□□□□ -0.06
SKA2-204ENST00000578519 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
SKA2-204ENST00000578519 METP08581 1390 aa14.7□□□□□ -0.06
SKA2-204ENST00000578519 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
SKA2-204ENST00000578519 C3P01024 1663 aa14.69□□□□□ -0.06
SKA2-204ENST00000578519 CABP1Q9NZU7 370 aa14.69□□□□□ -0.06
SKA2-204ENST00000578519 MED14O60244 1454 aa14.69□□□□□ -0.06
SKA2-204ENST00000578519 ATP7BP35670 1465 aa14.69□□□□□ -0.06
SKA2-204ENST00000578519 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
SKA2-204ENST00000578519 PPP4R2Q9NY27 417 aa14.68□□□□□ -0.06
SKA2-204ENST00000578519 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
SKA2-204ENST00000578519 KNDC1Q76NI1 1749 aa14.68□□□□□ -0.06
SKA2-204ENST00000578519 A0A1W2PP64 1363 aa14.68□□□□□ -0.06
SKA2-204ENST00000578519 LTKP29376 864 aa14.67□□□□□ -0.06
SKA2-204ENST00000578519 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
SKA2-204ENST00000578519 DIP2AQ14689 1571 aa14.67□□□□□ -0.06
SKA2-204ENST00000578519 CPS1P31327 1500 aa14.66□□□□□ -0.06
SKA2-204ENST00000578519 ANKLE2Q86XL3 938 aa14.66□□□□□ -0.06
SKA2-204ENST00000578519 NUDT16Q96DE0 195 aaKnown RBP14.66□□□□□ -0.06
SKA2-204ENST00000578519 SETD1AO15047 1707 aaKnown RBP14.66□□□□□ -0.06
SKA2-204ENST00000578519 NRXN3Q9Y4C0 1643 aa14.66□□□□□ -0.06
SKA2-204ENST00000578519 ADAMTS13Q76LX8 1427 aa14.66□□□□□ -0.06
SKA2-204ENST00000578519 MTHFSP49914 203 aa14.65□□□□□ -0.06
SKA2-204ENST00000578519 GOLGA2Q08379 1002 aa14.65□□□□□ -0.06
SKA2-204ENST00000578519 SALL2Q9Y467 1007 aaPredicted RBP14.65□□□□□ -0.06
SKA2-204ENST00000578519 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
SKA2-204ENST00000578519 PLEKHH1Q9ULM0 1364 aa14.63□□□□□ -0.07
SKA2-204ENST00000578519 FYB1O15117 783 aa14.63□□□□□ -0.07
SKA2-204ENST00000578519 TNNT2P45379 298 aaPredicted RBP14.63□□□□□ -0.07
SKA2-204ENST00000578519 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
SKA2-204ENST00000578519 AMOTL2Q9Y2J4 779 aa14.63□□□□□ -0.07
SKA2-204ENST00000578519 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
SKA2-204ENST00000578519 EDC4Q6P2E9 1401 aaKnown RBP14.62□□□□□ -0.07
SKA2-204ENST00000578519 PPIP5K1Q6PFW1 1433 aa14.61□□□□□ -0.07
SKA2-204ENST00000578519 NEFMP07197 916 aa14.61□□□□□ -0.07
SKA2-204ENST00000578519 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.61□□□□□ -0.07
SKA2-204ENST00000578519 SLC26A8Q96RN1 970 aa14.61□□□□□ -0.07
SKA2-204ENST00000578519 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
SKA2-204ENST00000578519 PTCH1Q13635 1447 aa14.6□□□□□ -0.07
SKA2-204ENST00000578519 E9PSI1 815 aa14.6□□□□□ -0.07
SKA2-204ENST00000578519 PLEKHG3A1L390 1219 aa14.59□□□□□ -0.07
SKA2-204ENST00000578519 APAF1O14727 1248 aa14.59□□□□□ -0.07
SKA2-204ENST00000578519 COG3Q96JB2 828 aa14.59□□□□□ -0.07
SKA2-204ENST00000578519 ROBO2Q9HCK4 1378 aa14.59□□□□□ -0.07
SKA2-204ENST00000578519 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.07
SKA2-204ENST00000578519 CD163L1Q9NR16 1453 aa14.58□□□□□ -0.08
SKA2-204ENST00000578519 CEP170BQ9Y4F5 1589 aaPredicted RBP14.58□□□□□ -0.08
SKA2-204ENST00000578519 ADGRB2O60241 1585 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms