RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
CTC1-204ENST00000578441 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
CTC1-204ENST00000578441 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
CTC1-204ENST00000578441 CCDC125Q86Z20 511 aa15.14■□□□□ 0.01
CTC1-204ENST00000578441 TECPR2O15040 1411 aa15.14■□□□□ 0.01
CTC1-204ENST00000578441 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
CTC1-204ENST00000578441 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
CTC1-204ENST00000578441 SPATA31E1Q6ZUB1 1445 aa15.12■□□□□ 0.01
CTC1-204ENST00000578441 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
CTC1-204ENST00000578441 DDX17Q92841 729 aaKnown RBP15.11■□□□□ 0.01
CTC1-204ENST00000578441 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
CTC1-204ENST00000578441 NPHP3Q7Z494 1330 aa15.11■□□□□ 0.01
CTC1-204ENST00000578441 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
CTC1-204ENST00000578441 LRPPRCP42704 1394 aaKnown RBP15.09■□□□□ 0.01
CTC1-204ENST00000578441 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
CTC1-204ENST00000578441 PIK3C2GO75747 1445 aa15.08■□□□□ 0
CTC1-204ENST00000578441 USP21Q9UK80 565 aa15.07■□□□□ 0
CTC1-204ENST00000578441 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
CTC1-204ENST00000578441 ATRNO75882 1429 aa15.07■□□□□ 0
CTC1-204ENST00000578441 MYOM2P54296 1465 aa15.07■□□□□ 0
CTC1-204ENST00000578441 PXDNQ92626 1479 aa15.07■□□□□ 0
CTC1-204ENST00000578441 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
CTC1-204ENST00000578441 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
CTC1-204ENST00000578441 KIF1AQ12756 1690 aa15.06■□□□□ 0
CTC1-204ENST00000578441 ADAMTS2O95450 1211 aa15.05■□□□□ -0
CTC1-204ENST00000578441 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
CTC1-204ENST00000578441 FMN2Q9NZ56 1722 aa15.04■□□□□ -0
CTC1-204ENST00000578441 SIRT1Q96EB6 747 aa15.04■□□□□ -0
CTC1-204ENST00000578441 RGL3Q3MIN7 710 aa15.03■□□□□ -0
CTC1-204ENST00000578441 NRXN1Q9ULB1 1477 aa15.02■□□□□ -0
CTC1-204ENST00000578441 EP400Q96L91 3159 aa15.02■□□□□ -0
CTC1-204ENST00000578441 YTHDC2Q9H6S0 1430 aaKnown RBP15.02■□□□□ -0
CTC1-204ENST00000578441 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.02□□□□□ -0.01
CTC1-204ENST00000578441 FOXO3O43524 673 aa15□□□□□ -0.01
CTC1-204ENST00000578441 WAPLQ7Z5K2 1190 aa14.99□□□□□ -0.01
CTC1-204ENST00000578441 C14orf93Q9H972 538 aaKnown RBP14.99□□□□□ -0.01
CTC1-204ENST00000578441 STK26Q9P289 416 aa14.99□□□□□ -0.01
CTC1-204ENST00000578441 BCL9LQ86UU0 1499 aa14.99□□□□□ -0.01
CTC1-204ENST00000578441 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
CTC1-204ENST00000578441 TMEM132EQ6IEE7 984 aa14.98□□□□□ -0.01
CTC1-204ENST00000578441 PLEKHH1Q9ULM0 1364 aa14.98□□□□□ -0.01
CTC1-204ENST00000578441 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
CTC1-204ENST00000578441 GJD4Q96KN9 370 aaPredicted RBP14.97□□□□□ -0.01
CTC1-204ENST00000578441 BLMP54132 1417 aaPredicted RBP14.97□□□□□ -0.01
CTC1-204ENST00000578441 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
CTC1-204ENST00000578441 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
CTC1-204ENST00000578441 SLIT2O94813 1529 aa14.95□□□□□ -0.02
CTC1-204ENST00000578441 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
CTC1-204ENST00000578441 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
CTC1-204ENST00000578441 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
CTC1-204ENST00000578441 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
CTC1-204ENST00000578441 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
CTC1-204ENST00000578441 PSME1Q06323 249 aa14.93□□□□□ -0.02
CTC1-204ENST00000578441 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
CTC1-204ENST00000578441 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
CTC1-204ENST00000578441 LRP5O75197 1615 aa14.92□□□□□ -0.02
CTC1-204ENST00000578441 NWD2Q9ULI1 1742 aa14.92□□□□□ -0.02
CTC1-204ENST00000578441 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
CTC1-204ENST00000578441 PHF8Q9UPP1 1060 aa14.92□□□□□ -0.02
CTC1-204ENST00000578441 SBNO1A3KN83 1393 aa14.92□□□□□ -0.02
CTC1-204ENST00000578441 ARHGEF10O15013 1369 aa14.91□□□□□ -0.02
CTC1-204ENST00000578441 CFAP70Q5T0N1 1121 aa14.91□□□□□ -0.02
CTC1-204ENST00000578441 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
CTC1-204ENST00000578441 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
CTC1-204ENST00000578441 EIF3AQ14152 1382 aaKnown RBP14.9□□□□□ -0.02
CTC1-204ENST00000578441 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
CTC1-204ENST00000578441 ABCA3Q99758 1704 aa14.9□□□□□ -0.02
CTC1-204ENST00000578441 GLI3P10071 1580 aa14.9□□□□□ -0.02
CTC1-204ENST00000578441 PRAM1Q96QH2 718 aa14.89□□□□□ -0.03
CTC1-204ENST00000578441 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
CTC1-204ENST00000578441 PLCH1Q4KWH8 1693 aa14.88□□□□□ -0.03
CTC1-204ENST00000578441 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
CTC1-204ENST00000578441 HAP1P54257 671 aaPredicted RBP14.87□□□□□ -0.03
CTC1-204ENST00000578441 SF3B2Q13435 895 aaKnown RBP14.87□□□□□ -0.03
CTC1-204ENST00000578441 POGKQ9P215 609 aa14.87□□□□□ -0.03
CTC1-204ENST00000578441 HRCP23327 699 aa14.86□□□□□ -0.03
CTC1-204ENST00000578441 TULP4Q9NRJ4 1543 aa14.86□□□□□ -0.03
CTC1-204ENST00000578441 VPS72Q15906 364 aa14.85□□□□□ -0.03
CTC1-204ENST00000578441 TRPM3Q9HCF6 1732 aaPredicted RBP14.85□□□□□ -0.03
CTC1-204ENST00000578441 ALS2Q96Q42 1657 aa14.84□□□□□ -0.03
CTC1-204ENST00000578441 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
CTC1-204ENST00000578441 GPRASP1Q5JY77 1395 aa14.84□□□□□ -0.03
CTC1-204ENST00000578441 BRWD3Q6RI45 1802 aa14.83□□□□□ -0.04
CTC1-204ENST00000578441 ITSN1Q15811 1721 aa14.83□□□□□ -0.04
CTC1-204ENST00000578441 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
CTC1-204ENST00000578441 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
CTC1-204ENST00000578441 COL14A1Q05707 1796 aaKnown RBP14.82□□□□□ -0.04
CTC1-204ENST00000578441 NRAPQ86VF7 1730 aa14.8□□□□□ -0.04
CTC1-204ENST00000578441 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
CTC1-204ENST00000578441 WASLO00401 505 aaPredicted RBP14.8□□□□□ -0.04
CTC1-204ENST00000578441 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
CTC1-204ENST00000578441 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
CTC1-204ENST00000578441 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
CTC1-204ENST00000578441 KRT27Q7Z3Y8 459 aa14.79□□□□□ -0.04
CTC1-204ENST00000578441 PMFBP1Q8TBY8 1022 aa14.79□□□□□ -0.04
CTC1-204ENST00000578441 CABLES1Q8TDN4 633 aa14.79□□□□□ -0.04
CTC1-204ENST00000578441 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
CTC1-204ENST00000578441 KIAA1210Q9ULL0 1709 aa14.78□□□□□ -0.04
CTC1-204ENST00000578441 BAG6P46379 1132 aa14.78□□□□□ -0.04
CTC1-204ENST00000578441 MINK1Q8N4C8 1332 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms