RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 COL16A1Q07092 1604 aaPredicted RBP18.78■□□□□ 0.6
NUP85-207ENST00000578294 POGKQ9P215 609 aa18.75■□□□□ 0.59
NUP85-207ENST00000578294 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
NUP85-207ENST00000578294 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
NUP85-207ENST00000578294 PRAM1Q96QH2 718 aa18.74■□□□□ 0.59
NUP85-207ENST00000578294 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
NUP85-207ENST00000578294 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
NUP85-207ENST00000578294 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
NUP85-207ENST00000578294 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
NUP85-207ENST00000578294 SPATA31A6Q5VVP1 1343 aa18.72■□□□□ 0.59
NUP85-207ENST00000578294 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
NUP85-207ENST00000578294 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
NUP85-207ENST00000578294 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
NUP85-207ENST00000578294 L3MBTL2Q969R5 705 aa18.7■□□□□ 0.58
NUP85-207ENST00000578294 ORAI2Q96SN7 254 aa18.7■□□□□ 0.58
NUP85-207ENST00000578294 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
NUP85-207ENST00000578294 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
NUP85-207ENST00000578294 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
NUP85-207ENST00000578294 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
NUP85-207ENST00000578294 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
NUP85-207ENST00000578294 SAFB2Q14151 953 aaKnown RBP eCLIP18.67■□□□□ 0.58
NUP85-207ENST00000578294 SOS2Q07890 1332 aaPredicted RBP18.67■□□□□ 0.58
NUP85-207ENST00000578294 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
NUP85-207ENST00000578294 KIF1AQ12756 1690 aa18.64■□□□□ 0.57
NUP85-207ENST00000578294 ARHGEF28Q8N1W1 1705 aaKnown RBP18.63■□□□□ 0.57
NUP85-207ENST00000578294 NUTM2FA1L443 756 aa18.63■□□□□ 0.57
NUP85-207ENST00000578294 DDX17Q92841 729 aaKnown RBP18.63■□□□□ 0.57
NUP85-207ENST00000578294 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
NUP85-207ENST00000578294 TONSLQ96HA7 1378 aa18.61■□□□□ 0.57
NUP85-207ENST00000578294 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
NUP85-207ENST00000578294 NBPF1Q3BBV0 1214 aa18.61■□□□□ 0.57
NUP85-207ENST00000578294 WASLO00401 505 aaPredicted RBP18.6■□□□□ 0.57
NUP85-207ENST00000578294 FOXO3O43524 673 aa18.6■□□□□ 0.57
NUP85-207ENST00000578294 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
NUP85-207ENST00000578294 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
NUP85-207ENST00000578294 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
NUP85-207ENST00000578294 PXDNQ92626 1479 aa18.59■□□□□ 0.57
NUP85-207ENST00000578294 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
NUP85-207ENST00000578294 TULP4Q9NRJ4 1543 aa18.59■□□□□ 0.57
NUP85-207ENST00000578294 LRP6O75581 1613 aa18.58■□□□□ 0.56
NUP85-207ENST00000578294 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
NUP85-207ENST00000578294 PSME1Q06323 249 aa18.57■□□□□ 0.56
NUP85-207ENST00000578294 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
NUP85-207ENST00000578294 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
NUP85-207ENST00000578294 NUTM2BA6NNL0 878 aaPredicted RBP18.55■□□□□ 0.56
NUP85-207ENST00000578294 NUTM2EB1AL46 878 aaPredicted RBP18.55■□□□□ 0.56
NUP85-207ENST00000578294 NUTM2AQ8IVF1 878 aaPredicted RBP18.55■□□□□ 0.56
NUP85-207ENST00000578294 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
NUP85-207ENST00000578294 USP32Q8NFA0 1604 aa18.55■□□□□ 0.56
NUP85-207ENST00000578294 COL22A1Q8NFW1 1626 aaPredicted RBP18.55■□□□□ 0.56
NUP85-207ENST00000578294 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
NUP85-207ENST00000578294 KRT28Q7Z3Y7 464 aa18.54■□□□□ 0.56
NUP85-207ENST00000578294 ZNF772Q68DY9 489 aaPredicted RBP18.53■□□□□ 0.56
NUP85-207ENST00000578294 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
NUP85-207ENST00000578294 RGPD8O14715 1765 aaPredicted RBP18.53■□□□□ 0.56
NUP85-207ENST00000578294 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.56
NUP85-207ENST00000578294 CDK19Q9BWU1 502 aa18.52■□□□□ 0.56
NUP85-207ENST00000578294 SBNO1A3KN83 1393 aa18.52■□□□□ 0.55
NUP85-207ENST00000578294 GPRASP1Q5JY77 1395 aa18.52■□□□□ 0.55
NUP85-207ENST00000578294 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
NUP85-207ENST00000578294 SOCS7O14512 581 aa18.51■□□□□ 0.55
NUP85-207ENST00000578294 NUDT16Q96DE0 195 aaKnown RBP18.51■□□□□ 0.55
NUP85-207ENST00000578294 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
NUP85-207ENST00000578294 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
NUP85-207ENST00000578294 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
NUP85-207ENST00000578294 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
NUP85-207ENST00000578294 ATP7BP35670 1465 aa18.5■□□□□ 0.55
NUP85-207ENST00000578294 TNS3Q68CZ2 1445 aa18.49■□□□□ 0.55
NUP85-207ENST00000578294 ARHGEF10O15013 1369 aa18.49■□□□□ 0.55
NUP85-207ENST00000578294 RALGAPBQ86X10 1494 aa18.48■□□□□ 0.55
NUP85-207ENST00000578294 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
NUP85-207ENST00000578294 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
NUP85-207ENST00000578294 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
NUP85-207ENST00000578294 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
NUP85-207ENST00000578294 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
NUP85-207ENST00000578294 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
NUP85-207ENST00000578294 CARD11Q9BXL7 1154 aa18.47■□□□□ 0.55
NUP85-207ENST00000578294 SRPK2P78362 688 aaKnown RBP18.46■□□□□ 0.55
NUP85-207ENST00000578294 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
NUP85-207ENST00000578294 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
NUP85-207ENST00000578294 AFF2P51816 1311 aa18.45■□□□□ 0.54
NUP85-207ENST00000578294 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
NUP85-207ENST00000578294 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
NUP85-207ENST00000578294 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
NUP85-207ENST00000578294 POLR3AO14802 1390 aaPredicted RBP18.43■□□□□ 0.54
NUP85-207ENST00000578294 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
NUP85-207ENST00000578294 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
NUP85-207ENST00000578294 TRPM3Q9HCF6 1732 aaPredicted RBP18.41■□□□□ 0.54
NUP85-207ENST00000578294 HAP1P54257 671 aaPredicted RBP18.41■□□□□ 0.54
NUP85-207ENST00000578294 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
NUP85-207ENST00000578294 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
NUP85-207ENST00000578294 CABP2Q9NPB3 220 aa18.4■□□□□ 0.54
NUP85-207ENST00000578294 ACEP12821 1306 aa18.4■□□□□ 0.54
NUP85-207ENST00000578294 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
NUP85-207ENST00000578294 RXRBP28702 533 aa18.39■□□□□ 0.53
NUP85-207ENST00000578294 MARF1Q9Y4F3 1742 aaKnown RBP18.39■□□□□ 0.53
NUP85-207ENST00000578294 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.53
NUP85-207ENST00000578294 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
NUP85-207ENST00000578294 USP21Q9UK80 565 aa18.38■□□□□ 0.53
NUP85-207ENST00000578294 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 990.2 ms