RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CDK12Q9NYV4 1490 aaPredicted RBP18.72■□□□□ 0.59
SMARCD2-207ENST00000578234 UPF1Q92900 1129 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMARCD2-207ENST00000578234 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
SMARCD2-207ENST00000578234 TECPR2O15040 1411 aa18.69■□□□□ 0.58
SMARCD2-207ENST00000578234 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
SMARCD2-207ENST00000578234 CDC42BPGQ6DT37 1551 aa18.68■□□□□ 0.58
SMARCD2-207ENST00000578234 STK26Q9P289 416 aa18.68■□□□□ 0.58
SMARCD2-207ENST00000578234 IFT172Q9UG01 1749 aa18.68■□□□□ 0.58
SMARCD2-207ENST00000578234 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
SMARCD2-207ENST00000578234 RBM6P78332 1123 aaKnown RBP18.67■□□□□ 0.58
SMARCD2-207ENST00000578234 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
SMARCD2-207ENST00000578234 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
SMARCD2-207ENST00000578234 NPHP3Q7Z494 1330 aa18.66■□□□□ 0.58
SMARCD2-207ENST00000578234 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
SMARCD2-207ENST00000578234 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
SMARCD2-207ENST00000578234 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
SMARCD2-207ENST00000578234 FOXO3O43524 673 aa18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 PLEKHG5O94827 1062 aa18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 USP21Q9UK80 565 aa18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 KNDC1Q76NI1 1749 aa18.62■□□□□ 0.57
SMARCD2-207ENST00000578234 YTHDC2Q9H6S0 1430 aaKnown RBP18.61■□□□□ 0.57
SMARCD2-207ENST00000578234 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
SMARCD2-207ENST00000578234 PXDNQ92626 1479 aa18.6■□□□□ 0.57
SMARCD2-207ENST00000578234 RGS12O14924 1447 aa18.6■□□□□ 0.57
SMARCD2-207ENST00000578234 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
SMARCD2-207ENST00000578234 TRPC5Q9UL62 973 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-207ENST00000578234 MYOM2P54296 1465 aa18.58■□□□□ 0.57
SMARCD2-207ENST00000578234 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.56
SMARCD2-207ENST00000578234 DHX57Q6P158 1386 aaKnown RBP18.56■□□□□ 0.56
SMARCD2-207ENST00000578234 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
SMARCD2-207ENST00000578234 FMN2Q9NZ56 1722 aa18.56■□□□□ 0.56
SMARCD2-207ENST00000578234 RAB3GAP2Q9H2M9 1393 aa18.55■□□□□ 0.56
SMARCD2-207ENST00000578234 HAP1P54257 671 aaPredicted RBP18.54■□□□□ 0.56
SMARCD2-207ENST00000578234 ATRNO75882 1429 aa18.53■□□□□ 0.56
SMARCD2-207ENST00000578234 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
SMARCD2-207ENST00000578234 KRT28Q7Z3Y7 464 aa18.52■□□□□ 0.56
SMARCD2-207ENST00000578234 KIF1AQ12756 1690 aa18.52■□□□□ 0.56
SMARCD2-207ENST00000578234 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.55
SMARCD2-207ENST00000578234 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.55
SMARCD2-207ENST00000578234 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
SMARCD2-207ENST00000578234 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMARCD2-207ENST00000578234 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
SMARCD2-207ENST00000578234 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
SMARCD2-207ENST00000578234 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
SMARCD2-207ENST00000578234 RGPD8O14715 1765 aaPredicted RBP18.48■□□□□ 0.55
SMARCD2-207ENST00000578234 PSME1Q06323 249 aa18.48■□□□□ 0.55
SMARCD2-207ENST00000578234 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
SMARCD2-207ENST00000578234 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
SMARCD2-207ENST00000578234 POGKQ9P215 609 aa18.47■□□□□ 0.55
SMARCD2-207ENST00000578234 HRCP23327 699 aa18.46■□□□□ 0.55
SMARCD2-207ENST00000578234 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
SMARCD2-207ENST00000578234 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
SMARCD2-207ENST00000578234 CCDC9Q9Y3X0 531 aaKnown RBP18.45■□□□□ 0.54
SMARCD2-207ENST00000578234 SLIT2O94813 1529 aa18.44■□□□□ 0.54
SMARCD2-207ENST00000578234 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
SMARCD2-207ENST00000578234 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
SMARCD2-207ENST00000578234 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
SMARCD2-207ENST00000578234 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
SMARCD2-207ENST00000578234 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
SMARCD2-207ENST00000578234 EP400Q96L91 3159 aa18.43■□□□□ 0.54
SMARCD2-207ENST00000578234 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
SMARCD2-207ENST00000578234 USP32Q8NFA0 1604 aa18.42■□□□□ 0.54
SMARCD2-207ENST00000578234 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
SMARCD2-207ENST00000578234 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
SMARCD2-207ENST00000578234 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
SMARCD2-207ENST00000578234 CCDC125Q86Z20 511 aa18.41■□□□□ 0.54
SMARCD2-207ENST00000578234 ZRANB1Q9UGI0 708 aa18.41■□□□□ 0.54
SMARCD2-207ENST00000578234 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
SMARCD2-207ENST00000578234 A0A0G2JS52 829 aa18.4■□□□□ 0.54
SMARCD2-207ENST00000578234 MYT1Q01538 1121 aa18.4■□□□□ 0.54
SMARCD2-207ENST00000578234 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
SMARCD2-207ENST00000578234 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
SMARCD2-207ENST00000578234 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.53
SMARCD2-207ENST00000578234 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
SMARCD2-207ENST00000578234 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
SMARCD2-207ENST00000578234 GLI3P10071 1580 aa18.38■□□□□ 0.53
SMARCD2-207ENST00000578234 VPS72Q15906 364 aa18.37■□□□□ 0.53
SMARCD2-207ENST00000578234 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-207ENST00000578234 WASLO00401 505 aaPredicted RBP18.36■□□□□ 0.53
SMARCD2-207ENST00000578234 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
SMARCD2-207ENST00000578234 PRR36Q9H6K5 1346 aa18.35■□□□□ 0.53
SMARCD2-207ENST00000578234 SF3B2Q13435 895 aaKnown RBP18.35■□□□□ 0.53
SMARCD2-207ENST00000578234 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
SMARCD2-207ENST00000578234 TULP4Q9NRJ4 1543 aa18.34■□□□□ 0.53
SMARCD2-207ENST00000578234 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
SMARCD2-207ENST00000578234 ABCA3Q99758 1704 aa18.34■□□□□ 0.53
SMARCD2-207ENST00000578234 SRCAPQ6ZRS2 3230 aa18.33■□□□□ 0.53
SMARCD2-207ENST00000578234 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
SMARCD2-207ENST00000578234 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
SMARCD2-207ENST00000578234 PLCH1Q4KWH8 1693 aa18.32■□□□□ 0.52
SMARCD2-207ENST00000578234 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
SMARCD2-207ENST00000578234 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
SMARCD2-207ENST00000578234 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
SMARCD2-207ENST00000578234 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
SMARCD2-207ENST00000578234 BRWD3Q6RI45 1802 aa18.29■□□□□ 0.52
SMARCD2-207ENST00000578234 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms