RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 RNF19BQ6ZMZ0 732 aa9.26□□□□□ -0.93
IFT20-205ENST00000578009 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
IFT20-205ENST00000578009 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
IFT20-205ENST00000578009 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
IFT20-205ENST00000578009 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
IFT20-205ENST00000578009 WFS1O76024 890 aa9.21□□□□□ -0.94
IFT20-205ENST00000578009 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
IFT20-205ENST00000578009 Q3C1V9 767 aa9.21□□□□□ -0.94
IFT20-205ENST00000578009 WNT7AO00755 349 aa9.2□□□□□ -0.94
IFT20-205ENST00000578009 TRIM32Q13049 653 aa9.2□□□□□ -0.94
IFT20-205ENST00000578009 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
IFT20-205ENST00000578009 SMPD1P17405 629 aa9.19□□□□□ -0.94
IFT20-205ENST00000578009 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
IFT20-205ENST00000578009 MMP16P51512 607 aa9.17□□□□□ -0.94
IFT20-205ENST00000578009 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
IFT20-205ENST00000578009 J3QL48 77 aa9.16□□□□□ -0.94
IFT20-205ENST00000578009 KDM4AO75164 1064 aa9.16□□□□□ -0.94
IFT20-205ENST00000578009 CD46P15529 392 aa9.16□□□□□ -0.94
IFT20-205ENST00000578009 USB1Q9BQ65 265 aaKnown RBP9.16□□□□□ -0.94
IFT20-205ENST00000578009 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
IFT20-205ENST00000578009 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
IFT20-205ENST00000578009 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
IFT20-205ENST00000578009 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
IFT20-205ENST00000578009 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
IFT20-205ENST00000578009 HLA-CQ95604 372 aa9.13□□□□□ -0.95
IFT20-205ENST00000578009 CCDC180Q9P1Z9 1646 aa9.13□□□□□ -0.95
IFT20-205ENST00000578009 MDM2Q00987 491 aaPredicted RBP9.12□□□□□ -0.95
IFT20-205ENST00000578009 HPS1Q92902 700 aa9.12□□□□□ -0.95
IFT20-205ENST00000578009 REPIN1Q9BWE0 567 aaKnown RBP9.12□□□□□ -0.95
IFT20-205ENST00000578009 MAP2K5Q13163 448 aa9.11□□□□□ -0.95
IFT20-205ENST00000578009 RC3H1Q5TC82 1133 aaKnown RBP9.11□□□□□ -0.95
IFT20-205ENST00000578009 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
IFT20-205ENST00000578009 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
IFT20-205ENST00000578009 USP46P62068 366 aa9.1□□□□□ -0.95
IFT20-205ENST00000578009 SKOR1P84550 965 aa9.09□□□□□ -0.95
IFT20-205ENST00000578009 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
IFT20-205ENST00000578009 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
IFT20-205ENST00000578009 IRF6O14896 467 aa9.08□□□□□ -0.96
IFT20-205ENST00000578009 HOXA2O43364 376 aa9.07□□□□□ -0.96
IFT20-205ENST00000578009 WIPF1O43516 503 aa9.07□□□□□ -0.96
IFT20-205ENST00000578009 ALDH1A1P00352 501 aa9.07□□□□□ -0.96
IFT20-205ENST00000578009 WNT7BP56706 349 aa9.07□□□□□ -0.96
IFT20-205ENST00000578009 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
IFT20-205ENST00000578009 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
IFT20-205ENST00000578009 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
IFT20-205ENST00000578009 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
IFT20-205ENST00000578009 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
IFT20-205ENST00000578009 JUNDP17535 347 aa9.05□□□□□ -0.96
IFT20-205ENST00000578009 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
IFT20-205ENST00000578009 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
IFT20-205ENST00000578009 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
IFT20-205ENST00000578009 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
IFT20-205ENST00000578009 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
IFT20-205ENST00000578009 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
IFT20-205ENST00000578009 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
IFT20-205ENST00000578009 KRI1Q8N9T8 703 aaKnown RBP9.01□□□□□ -0.97
IFT20-205ENST00000578009 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
IFT20-205ENST00000578009 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
IFT20-205ENST00000578009 CLCN1P35523 988 aa9□□□□□ -0.97
IFT20-205ENST00000578009 RETREG3Q86VR2 466 aa9□□□□□ -0.97
IFT20-205ENST00000578009 KDM2AQ9Y2K7 1162 aa9□□□□□ -0.97
IFT20-205ENST00000578009 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
IFT20-205ENST00000578009 SLC16A10Q8TF71 515 aa8.99□□□□□ -0.97
IFT20-205ENST00000578009 FAM217BQ9NTX9 383 aaPredicted RBP8.99□□□□□ -0.97
IFT20-205ENST00000578009 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
IFT20-205ENST00000578009 BMP1P13497 986 aa8.98□□□□□ -0.97
IFT20-205ENST00000578009 CAPN5O15484 640 aaPredicted RBP8.97□□□□□ -0.97
IFT20-205ENST00000578009 SIAH2O43255 324 aa8.97□□□□□ -0.97
IFT20-205ENST00000578009 FDX1P10109 184 aa8.96□□□□□ -0.98
IFT20-205ENST00000578009 MS4A1P11836 297 aa8.96□□□□□ -0.98
IFT20-205ENST00000578009 SUZ12Q15022 739 aaKnown RBP8.96□□□□□ -0.98
IFT20-205ENST00000578009 CCNYL3P0C7X3 344 aa8.95□□□□□ -0.98
IFT20-205ENST00000578009 SH3BP2P78314 561 aa8.95□□□□□ -0.98
IFT20-205ENST00000578009 TRIM46Q7Z4K8 759 aa8.95□□□□□ -0.98
IFT20-205ENST00000578009 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
IFT20-205ENST00000578009 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
IFT20-205ENST00000578009 VEGFBP49765 207 aa8.93□□□□□ -0.98
IFT20-205ENST00000578009 LINC01559Q495D7 138 aa8.93□□□□□ -0.98
IFT20-205ENST00000578009 GMPRP36959 345 aa8.92□□□□□ -0.98
IFT20-205ENST00000578009 UNC93B1Q9H1C4 597 aa8.92□□□□□ -0.98
IFT20-205ENST00000578009 BAP1Q92560 729 aa8.91□□□□□ -0.98
IFT20-205ENST00000578009 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.98
IFT20-205ENST00000578009 NDUFV2P19404 249 aa8.9□□□□□ -0.98
IFT20-205ENST00000578009 SSTR3P32745 418 aaPredicted RBP8.9□□□□□ -0.98
IFT20-205ENST00000578009 PTPRNQ16849 979 aa8.9□□□□□ -0.98
IFT20-205ENST00000578009 IRF7Q92985 503 aa8.9□□□□□ -0.98
IFT20-205ENST00000578009 TLL2Q9Y6L7 1015 aa8.9□□□□□ -0.98
IFT20-205ENST00000578009 SPIRE2Q8WWL2 714 aa8.89□□□□□ -0.99
IFT20-205ENST00000578009 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
IFT20-205ENST00000578009 EVA1BQ9NVM1 165 aa8.89□□□□□ -0.99
IFT20-205ENST00000578009 PRR7Q8TB68 274 aa8.88□□□□□ -0.99
IFT20-205ENST00000578009 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
IFT20-205ENST00000578009 PLEKHG3A1L390 1219 aa8.87□□□□□ -0.99
IFT20-205ENST00000578009 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
IFT20-205ENST00000578009 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
IFT20-205ENST00000578009 NPAS3Q8IXF0 933 aa8.87□□□□□ -0.99
IFT20-205ENST00000578009 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
IFT20-205ENST00000578009 H3BM21 787 aa8.86□□□□□ -0.99
IFT20-205ENST00000578009 NNTQ13423 1086 aa8.86□□□□□ -0.99
IFT20-205ENST00000578009 TTLL12Q14166 644 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms