RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SF3B2Q13435 895 aaKnown RBP21.83■■□□□ 1.09
PPP4R1-206ENST00000577779 SPHKAPQ2M3C7 1700 aa21.81■■□□□ 1.08
PPP4R1-206ENST00000577779 NPHP3Q7Z494 1330 aa21.8■■□□□ 1.08
PPP4R1-206ENST00000577779 ROBO2Q9HCK4 1378 aa21.8■■□□□ 1.08
PPP4R1-206ENST00000577779 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
PPP4R1-206ENST00000577779 RALGAPBQ86X10 1494 aa21.79■■□□□ 1.08
PPP4R1-206ENST00000577779 NEXMIFQ5QGS0 1516 aa21.79■■□□□ 1.08
PPP4R1-206ENST00000577779 GLI3P10071 1580 aa21.78■■□□□ 1.08
PPP4R1-206ENST00000577779 BRWD3Q6RI45 1802 aa21.78■■□□□ 1.08
PPP4R1-206ENST00000577779 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.08
PPP4R1-206ENST00000577779 UNC5CLQ8IV45 518 aa21.77■■□□□ 1.08
PPP4R1-206ENST00000577779 PXDNQ92626 1479 aa21.77■■□□□ 1.07
PPP4R1-206ENST00000577779 ROCK1Q13464 1354 aa21.75■■□□□ 1.07
PPP4R1-206ENST00000577779 XPCQ01831 940 aaPredicted RBP21.75■■□□□ 1.07
PPP4R1-206ENST00000577779 PSDA5PKW4 1024 aaPredicted RBP21.74■■□□□ 1.07
PPP4R1-206ENST00000577779 SLIT2O94813 1529 aa21.73■■□□□ 1.07
PPP4R1-206ENST00000577779 FOXO3O43524 673 aa21.72■■□□□ 1.07
PPP4R1-206ENST00000577779 SEPT12Q8IYM1 358 aa21.72■■□□□ 1.07
PPP4R1-206ENST00000577779 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
PPP4R1-206ENST00000577779 HRCP23327 699 aa21.71■■□□□ 1.07
PPP4R1-206ENST00000577779 CLTCL1P53675 1640 aa21.7■■□□□ 1.06
PPP4R1-206ENST00000577779 PRAG1Q86YV5 1406 aa21.7■■□□□ 1.06
PPP4R1-206ENST00000577779 LRPPRCP42704 1394 aaKnown RBP21.69■■□□□ 1.06
PPP4R1-206ENST00000577779 CDC42BPGQ6DT37 1551 aa21.69■■□□□ 1.06
PPP4R1-206ENST00000577779 KIF1BO60333 1816 aa21.67■■□□□ 1.06
PPP4R1-206ENST00000577779 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
PPP4R1-206ENST00000577779 BAG6P46379 1132 aa21.66■■□□□ 1.06
PPP4R1-206ENST00000577779 KRT27Q7Z3Y8 459 aa21.66■■□□□ 1.06
PPP4R1-206ENST00000577779 USP32Q8NFA0 1604 aa21.65■■□□□ 1.06
PPP4R1-206ENST00000577779 VPS72Q15906 364 aa21.64■■□□□ 1.05
PPP4R1-206ENST00000577779 CCDC9Q9Y3X0 531 aaKnown RBP21.64■■□□□ 1.05
PPP4R1-206ENST00000577779 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
PPP4R1-206ENST00000577779 SPATA31A3Q5VYP0 1347 aa21.62■■□□□ 1.05
PPP4R1-206ENST00000577779 ONECUT3O60422 494 aaPredicted RBP21.62■■□□□ 1.05
PPP4R1-206ENST00000577779 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
PPP4R1-206ENST00000577779 NAIPQ13075 1403 aa21.61■■□□□ 1.05
PPP4R1-206ENST00000577779 ITGAEP38570 1179 aa21.6■■□□□ 1.05
PPP4R1-206ENST00000577779 A0A0G2JS52 829 aa21.59■■□□□ 1.05
PPP4R1-206ENST00000577779 MYT1Q01538 1121 aa21.59■■□□□ 1.05
PPP4R1-206ENST00000577779 PLCH1Q4KWH8 1693 aa21.59■■□□□ 1.05
PPP4R1-206ENST00000577779 NWD2Q9ULI1 1742 aa21.58■■□□□ 1.04
PPP4R1-206ENST00000577779 CCDC144AA2RUR9 1427 aa21.57■■□□□ 1.04
PPP4R1-206ENST00000577779 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
PPP4R1-206ENST00000577779 EN1Q05925 392 aaPredicted RBP21.56■■□□□ 1.04
PPP4R1-206ENST00000577779 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
PPP4R1-206ENST00000577779 PLEKHG5O94827 1062 aa21.55■■□□□ 1.04
PPP4R1-206ENST00000577779 KRT28Q7Z3Y7 464 aa21.55■■□□□ 1.04
PPP4R1-206ENST00000577779 KIF1AQ12756 1690 aa21.55■■□□□ 1.04
PPP4R1-206ENST00000577779 CABLES1Q8TDN4 633 aa21.54■■□□□ 1.04
PPP4R1-206ENST00000577779 YY1P25490 414 aa21.53■■□□□ 1.04
PPP4R1-206ENST00000577779 WAPLQ7Z5K2 1190 aa21.53■■□□□ 1.04
PPP4R1-206ENST00000577779 RGPD1P0DJD0 1748 aa21.52■■□□□ 1.04
PPP4R1-206ENST00000577779 PPLO60437 1756 aa21.52■■□□□ 1.04
PPP4R1-206ENST00000577779 STK26Q9P289 416 aa21.52■■□□□ 1.04
PPP4R1-206ENST00000577779 TNS3Q68CZ2 1445 aa21.52■■□□□ 1.04
PPP4R1-206ENST00000577779 FAM98CQ17RN3 349 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-206ENST00000577779 FMN2Q9NZ56 1722 aa21.5■■□□□ 1.03
PPP4R1-206ENST00000577779 PSME1Q06323 249 aa21.49■■□□□ 1.03
PPP4R1-206ENST00000577779 LMOD2Q6P5Q4 547 aa21.48■■□□□ 1.03
PPP4R1-206ENST00000577779 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
PPP4R1-206ENST00000577779 TECPR2O15040 1411 aa21.47■■□□□ 1.03
PPP4R1-206ENST00000577779 FAM83GA6ND36 823 aa21.47■■□□□ 1.03
PPP4R1-206ENST00000577779 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
PPP4R1-206ENST00000577779 FAM182BQ5T319 152 aa21.46■■□□□ 1.03
PPP4R1-206ENST00000577779 PLEKHH1Q9ULM0 1364 aa21.46■■□□□ 1.03
PPP4R1-206ENST00000577779 DISP2A7MBM2 1401 aa21.45■■□□□ 1.02
PPP4R1-206ENST00000577779 PHF8Q9UPP1 1060 aa21.44■■□□□ 1.02
PPP4R1-206ENST00000577779 ARHGEF10O15013 1369 aa21.44■■□□□ 1.02
PPP4R1-206ENST00000577779 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
PPP4R1-206ENST00000577779 TNS1Q9HBL0 1735 aaKnown RBP21.43■■□□□ 1.02
PPP4R1-206ENST00000577779 EZH2Q15910 746 aaKnown RBP21.43■■□□□ 1.02
PPP4R1-206ENST00000577779 SBNO1A3KN83 1393 aa21.43■■□□□ 1.02
PPP4R1-206ENST00000577779 RGPD8O14715 1765 aaPredicted RBP21.42■■□□□ 1.02
PPP4R1-206ENST00000577779 ABCC11Q96J66 1382 aa21.42■■□□□ 1.02
PPP4R1-206ENST00000577779 BTG4Q9NY30 223 aa21.42■■□□□ 1.02
PPP4R1-206ENST00000577779 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
PPP4R1-206ENST00000577779 ADGRF5Q8IZF2 1346 aa21.41■■□□□ 1.02
PPP4R1-206ENST00000577779 IFT172Q9UG01 1749 aa21.4■■□□□ 1.02
PPP4R1-206ENST00000577779 TMEM132EQ6IEE7 984 aa21.39■■□□□ 1.01
PPP4R1-206ENST00000577779 ADGRB2O60241 1585 aa21.39■■□□□ 1.01
PPP4R1-206ENST00000577779 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
PPP4R1-206ENST00000577779 CAMKK2Q96RR4 588 aa21.38■■□□□ 1.01
PPP4R1-206ENST00000577779 NRXN1Q9ULB1 1477 aa21.38■■□□□ 1.01
PPP4R1-206ENST00000577779 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
PPP4R1-206ENST00000577779 SPATA31A5Q5VU36 1347 aa21.36■■□□□ 1.01
PPP4R1-206ENST00000577779 SPATA31A7Q8IWB4 1347 aa21.36■■□□□ 1.01
PPP4R1-206ENST00000577779 THSD7AQ9UPZ6 1657 aa21.35■■□□□ 1.01
PPP4R1-206ENST00000577779 DCAF8L1A6NGE4 600 aa21.35■■□□□ 1.01
PPP4R1-206ENST00000577779 TRIM37O94972 964 aa21.35■■□□□ 1.01
PPP4R1-206ENST00000577779 YTHDC2Q9H6S0 1430 aaKnown RBP21.34■■□□□ 1.01
PPP4R1-206ENST00000577779 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
PPP4R1-206ENST00000577779 PPP1R1BQ9UD71 204 aaPredicted RBP21.33■■□□□ 1.01
PPP4R1-206ENST00000577779 APBA3O96018 575 aa21.32■■□□□ 1
PPP4R1-206ENST00000577779 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
PPP4R1-206ENST00000577779 RGL3Q3MIN7 710 aa21.31■■□□□ 1
PPP4R1-206ENST00000577779 FAM196AQ6ZSG2 479 aa21.31■■□□□ 1
PPP4R1-206ENST00000577779 PMFBP1Q8TBY8 1022 aa21.31■■□□□ 1
PPP4R1-206ENST00000577779 SIRT1Q96EB6 747 aa21.3■■□□□ 1
PPP4R1-206ENST00000577779 ANKRD30BQ9BXX2 1392 aa21.3■■□□□ 1
PPP4R1-206ENST00000577779 NBPF8Q3BBV2 869 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms