RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 NINLQ9Y2I6 1382 aa20.75■□□□□ 0.91
IFT20-204ENST00000577498 SAFB2Q14151 953 aaKnown RBP eCLIP20.75■□□□□ 0.91
IFT20-204ENST00000577498 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
IFT20-204ENST00000577498 MINK1Q8N4C8 1332 aaPredicted RBP20.75■□□□□ 0.91
IFT20-204ENST00000577498 ATAD2Q6PL18 1390 aa20.74■□□□□ 0.91
IFT20-204ENST00000577498 PLEKHH1Q9ULM0 1364 aa20.74■□□□□ 0.91
IFT20-204ENST00000577498 NPHP4O75161 1426 aaPredicted RBP20.74■□□□□ 0.91
IFT20-204ENST00000577498 ROBO2Q9HCK4 1378 aa20.73■□□□□ 0.91
IFT20-204ENST00000577498 XRN1Q8IZH2 1706 aaKnown RBP20.73■□□□□ 0.91
IFT20-204ENST00000577498 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
IFT20-204ENST00000577498 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
IFT20-204ENST00000577498 RALBP1Q15311 655 aa20.71■□□□□ 0.91
IFT20-204ENST00000577498 ADGRB2O60241 1585 aa20.7■□□□□ 0.9
IFT20-204ENST00000577498 NPC1L1Q9UHC9 1359 aa20.7■□□□□ 0.9
IFT20-204ENST00000577498 SRPK2P78362 688 aaKnown RBP20.69■□□□□ 0.9
IFT20-204ENST00000577498 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
IFT20-204ENST00000577498 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
IFT20-204ENST00000577498 KNSTRNQ9Y448 316 aa20.69■□□□□ 0.9
IFT20-204ENST00000577498 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
IFT20-204ENST00000577498 PARD3Q8TEW0 1356 aa20.66■□□□□ 0.9
IFT20-204ENST00000577498 CHD2O14647 1828 aaKnown RBP20.65■□□□□ 0.9
IFT20-204ENST00000577498 ANKRD36BQ8N2N9 1353 aa20.65■□□□□ 0.9
IFT20-204ENST00000577498 TMC1Q8TDI8 760 aa20.65■□□□□ 0.9
IFT20-204ENST00000577498 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.89
IFT20-204ENST00000577498 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
IFT20-204ENST00000577498 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
IFT20-204ENST00000577498 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.63■□□□□ 0.89
IFT20-204ENST00000577498 MYBBP1AQ9BQG0 1328 aaKnown RBP20.62■□□□□ 0.89
IFT20-204ENST00000577498 LMTK3Q96Q04 1460 aa20.62■□□□□ 0.89
IFT20-204ENST00000577498 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
IFT20-204ENST00000577498 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
IFT20-204ENST00000577498 NWD1Q149M9 1564 aa20.6■□□□□ 0.89
IFT20-204ENST00000577498 KCNA6P17658 529 aa20.6■□□□□ 0.89
IFT20-204ENST00000577498 TERF2IPQ9NYB0 399 aa20.6■□□□□ 0.89
IFT20-204ENST00000577498 ATP7BP35670 1465 aa20.59■□□□□ 0.89
IFT20-204ENST00000577498 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.89
IFT20-204ENST00000577498 NSD3Q9BZ95 1437 aa20.58■□□□□ 0.88
IFT20-204ENST00000577498 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.88
IFT20-204ENST00000577498 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
IFT20-204ENST00000577498 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
IFT20-204ENST00000577498 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
IFT20-204ENST00000577498 CD163L1Q9NR16 1453 aa20.56■□□□□ 0.88
IFT20-204ENST00000577498 NLRP13Q86W25 1043 aa20.55■□□□□ 0.88
IFT20-204ENST00000577498 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
IFT20-204ENST00000577498 CCDC61Q9Y6R9 512 aa20.55■□□□□ 0.88
IFT20-204ENST00000577498 NSD2O96028 1365 aa20.55■□□□□ 0.88
IFT20-204ENST00000577498 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
IFT20-204ENST00000577498 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
IFT20-204ENST00000577498 CABP1Q9NZU7 370 aa20.54■□□□□ 0.88
IFT20-204ENST00000577498 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
IFT20-204ENST00000577498 HSPA2P54652 639 aa20.53■□□□□ 0.88
IFT20-204ENST00000577498 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
IFT20-204ENST00000577498 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
IFT20-204ENST00000577498 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
IFT20-204ENST00000577498 ANKARQ7Z5J8 1434 aa20.52■□□□□ 0.87
IFT20-204ENST00000577498 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
IFT20-204ENST00000577498 CDC42BPGQ6DT37 1551 aa20.51■□□□□ 0.87
IFT20-204ENST00000577498 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
IFT20-204ENST00000577498 CPSF1Q10570 1443 aaKnown RBP20.51■□□□□ 0.87
IFT20-204ENST00000577498 PRR36Q9H6K5 1346 aa20.51■□□□□ 0.87
IFT20-204ENST00000577498 ADGRL3Q9HAR2 1447 aa20.5■□□□□ 0.87
IFT20-204ENST00000577498 PLEKHG3A1L390 1219 aa20.48■□□□□ 0.87
IFT20-204ENST00000577498 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
IFT20-204ENST00000577498 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
IFT20-204ENST00000577498 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
IFT20-204ENST00000577498 STRCQ7RTU9 1775 aa20.47■□□□□ 0.87
IFT20-204ENST00000577498 PPP2R1AP30153 589 aa20.47■□□□□ 0.87
IFT20-204ENST00000577498 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
IFT20-204ENST00000577498 NALCNQ8IZF0 1738 aa20.47■□□□□ 0.87
IFT20-204ENST00000577498 EDC4Q6P2E9 1401 aaKnown RBP20.46■□□□□ 0.87
IFT20-204ENST00000577498 AKAP12Q02952 1782 aa20.45■□□□□ 0.86
IFT20-204ENST00000577498 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
IFT20-204ENST00000577498 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
IFT20-204ENST00000577498 MON2Q7Z3U7 1717 aa20.44■□□□□ 0.86
IFT20-204ENST00000577498 PROSER2Q86WR7 435 aaPredicted RBP20.43■□□□□ 0.86
IFT20-204ENST00000577498 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
IFT20-204ENST00000577498 ANKRD26Q9UPS8 1709 aa20.41■□□□□ 0.86
IFT20-204ENST00000577498 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
IFT20-204ENST00000577498 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
IFT20-204ENST00000577498 FYB1O15117 783 aa20.4■□□□□ 0.86
IFT20-204ENST00000577498 INSRP06213 1382 aa20.39■□□□□ 0.85
IFT20-204ENST00000577498 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
IFT20-204ENST00000577498 ACEP12821 1306 aa20.38■□□□□ 0.85
IFT20-204ENST00000577498 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
IFT20-204ENST00000577498 STRCP1A6NGW2 1772 aa20.38■□□□□ 0.85
IFT20-204ENST00000577498 NUTM2FA1L443 756 aa20.37■□□□□ 0.85
IFT20-204ENST00000577498 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
IFT20-204ENST00000577498 USP6P35125 1406 aa20.36■□□□□ 0.85
IFT20-204ENST00000577498 DCCP43146 1447 aa20.36■□□□□ 0.85
IFT20-204ENST00000577498 C19orf44Q9H6X5 657 aa20.36■□□□□ 0.85
IFT20-204ENST00000577498 NRKQ7Z2Y5 1582 aa20.36■□□□□ 0.85
IFT20-204ENST00000577498 GGNBP2Q9H3C7 697 aa20.35■□□□□ 0.85
IFT20-204ENST00000577498 RGPD8O14715 1765 aaPredicted RBP20.35■□□□□ 0.85
IFT20-204ENST00000577498 SSH2Q76I76 1423 aa20.35■□□□□ 0.85
IFT20-204ENST00000577498 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
IFT20-204ENST00000577498 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
IFT20-204ENST00000577498 TTC21BQ7Z4L5 1316 aa20.33■□□□□ 0.85
IFT20-204ENST00000577498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.85
IFT20-204ENST00000577498 NGDNQ8NEJ9 315 aaKnown RBP20.33■□□□□ 0.85
IFT20-204ENST00000577498 RBM33Q96EV2 1170 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms