RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
TRAPPC8-203ENST00000577474 P3H3Q8IVL6 736 aa9.6□□□□□ -0.87
TRAPPC8-203ENST00000577474 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
TRAPPC8-203ENST00000577474 J3QL48 77 aa9.59□□□□□ -0.87
TRAPPC8-203ENST00000577474 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC8-203ENST00000577474 BRICD5Q6PL45 260 aa9.58□□□□□ -0.88
TRAPPC8-203ENST00000577474 RDH13Q8NBN7 331 aa9.58□□□□□ -0.88
TRAPPC8-203ENST00000577474 KCNV2Q8TDN2 545 aa9.58□□□□□ -0.88
TRAPPC8-203ENST00000577474 LOC100996750A0A140TA64 210 aa9.57□□□□□ -0.88
TRAPPC8-203ENST00000577474 KRTAP4-6Q9BYQ5 205 aa9.57□□□□□ -0.88
TRAPPC8-203ENST00000577474 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC8-203ENST00000577474 MRGPRX2Q96LB1 330 aa9.56□□□□□ -0.88
TRAPPC8-203ENST00000577474 MSS51Q4VC12 460 aa9.55□□□□□ -0.88
TRAPPC8-203ENST00000577474 ERICH6Q7L0X2 663 aa9.55□□□□□ -0.88
TRAPPC8-203ENST00000577474 HPS1Q92902 700 aa9.55□□□□□ -0.88
TRAPPC8-203ENST00000577474 DDX11L8A8MPP1 907 aa9.54□□□□□ -0.88
TRAPPC8-203ENST00000577474 FECHP22830 423 aa9.54□□□□□ -0.88
TRAPPC8-203ENST00000577474 GCGRP47871 477 aa9.54□□□□□ -0.88
TRAPPC8-203ENST00000577474 TRIM32Q13049 653 aa9.54□□□□□ -0.88
TRAPPC8-203ENST00000577474 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
TRAPPC8-203ENST00000577474 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC8-203ENST00000577474 RNF19BQ6ZMZ0 732 aa9.53□□□□□ -0.88
TRAPPC8-203ENST00000577474 FAM181BA6NEQ2 426 aa9.52□□□□□ -0.89
TRAPPC8-203ENST00000577474 HIC1Q14526 733 aa9.52□□□□□ -0.89
TRAPPC8-203ENST00000577474 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
TRAPPC8-203ENST00000577474 GMPRP36959 345 aa9.49□□□□□ -0.89
TRAPPC8-203ENST00000577474 MMP16P51512 607 aa9.49□□□□□ -0.89
TRAPPC8-203ENST00000577474 NLRP7Q8WX94 980 aa9.49□□□□□ -0.89
TRAPPC8-203ENST00000577474 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
TRAPPC8-203ENST00000577474 ZSCAN1Q8NBB4 408 aa9.48□□□□□ -0.89
TRAPPC8-203ENST00000577474 SEMA3EO15041 775 aa9.47□□□□□ -0.89
TRAPPC8-203ENST00000577474 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
TRAPPC8-203ENST00000577474 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
TRAPPC8-203ENST00000577474 SKOR1P84550 965 aa9.45□□□□□ -0.9
TRAPPC8-203ENST00000577474 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
TRAPPC8-203ENST00000577474 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC8-203ENST00000577474 GNPATO15228 680 aa9.44□□□□□ -0.9
TRAPPC8-203ENST00000577474 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
TRAPPC8-203ENST00000577474 GRIPAP1Q4V328 841 aa9.43□□□□□ -0.9
TRAPPC8-203ENST00000577474 IRF7Q92985 503 aa9.43□□□□□ -0.9
TRAPPC8-203ENST00000577474 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
TRAPPC8-203ENST00000577474 Q3C1V9 767 aa9.42□□□□□ -0.9
TRAPPC8-203ENST00000577474 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
TRAPPC8-203ENST00000577474 VEGFBP49765 207 aa9.41□□□□□ -0.9
TRAPPC8-203ENST00000577474 RBM26Q5T8P6 1007 aaKnown RBP9.41□□□□□ -0.9
TRAPPC8-203ENST00000577474 ALDH1A1P00352 501 aa9.4□□□□□ -0.9
TRAPPC8-203ENST00000577474 WNT7BP56706 349 aa9.4□□□□□ -0.9
TRAPPC8-203ENST00000577474 TMEM132AQ24JP5 1023 aa9.4□□□□□ -0.9
TRAPPC8-203ENST00000577474 TRIM46Q7Z4K8 759 aa9.4□□□□□ -0.9
TRAPPC8-203ENST00000577474 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
TRAPPC8-203ENST00000577474 BMP1P13497 986 aa9.39□□□□□ -0.91
TRAPPC8-203ENST00000577474 CCDC24Q8N4L8 307 aa9.39□□□□□ -0.91
TRAPPC8-203ENST00000577474 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
TRAPPC8-203ENST00000577474 H3BM21 787 aa9.38□□□□□ -0.91
TRAPPC8-203ENST00000577474 GPR37O15354 613 aa9.38□□□□□ -0.91
TRAPPC8-203ENST00000577474 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
TRAPPC8-203ENST00000577474 SIAH2O43255 324 aa9.36□□□□□ -0.91
TRAPPC8-203ENST00000577474 SUZ12Q15022 739 aaKnown RBP9.36□□□□□ -0.91
TRAPPC8-203ENST00000577474 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC8-203ENST00000577474 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-203ENST00000577474 CD46P15529 392 aa9.32□□□□□ -0.92
TRAPPC8-203ENST00000577474 KDM4AO75164 1064 aa9.31□□□□□ -0.92
TRAPPC8-203ENST00000577474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC8-203ENST00000577474 HLA-CQ95604 372 aa9.31□□□□□ -0.92
TRAPPC8-203ENST00000577474 ZFP42Q96MM3 310 aa9.3□□□□□ -0.92
TRAPPC8-203ENST00000577474 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
TRAPPC8-203ENST00000577474 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC8-203ENST00000577474 EHBP1Q8NDI1 1231 aa9.29□□□□□ -0.92
TRAPPC8-203ENST00000577474 SMYD5Q6GMV2 418 aa9.28□□□□□ -0.92
TRAPPC8-203ENST00000577474 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
TRAPPC8-203ENST00000577474 JUNDP17535 347 aa9.27□□□□□ -0.93
TRAPPC8-203ENST00000577474 GSK3AP49840 483 aa9.24□□□□□ -0.93
TRAPPC8-203ENST00000577474 USP46P62068 366 aa9.24□□□□□ -0.93
TRAPPC8-203ENST00000577474 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
TRAPPC8-203ENST00000577474 SYMPKQ92797 1274 aaKnown RBP9.24□□□□□ -0.93
TRAPPC8-203ENST00000577474 HOXA2O43364 376 aa9.23□□□□□ -0.93
TRAPPC8-203ENST00000577474 SH3BP2P78314 561 aa9.23□□□□□ -0.93
TRAPPC8-203ENST00000577474 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
TRAPPC8-203ENST00000577474 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
TRAPPC8-203ENST00000577474 VSIG8P0DPA2 414 aa9.22□□□□□ -0.93
TRAPPC8-203ENST00000577474 KCTD17Q8N5Z5 321 aa9.22□□□□□ -0.93
TRAPPC8-203ENST00000577474 SOBPA7XYQ1 873 aa9.2□□□□□ -0.94
TRAPPC8-203ENST00000577474 MRPL14Q6P1L8 145 aaKnown RBP9.2□□□□□ -0.94
TRAPPC8-203ENST00000577474 PURBQ96QR8 312 aaKnown RBP9.19□□□□□ -0.94
TRAPPC8-203ENST00000577474 RETREG3Q86VR2 466 aa9.18□□□□□ -0.94
TRAPPC8-203ENST00000577474 ARXQ96QS3 562 aa9.18□□□□□ -0.94
TRAPPC8-203ENST00000577474 TLL2Q9Y6L7 1015 aa9.18□□□□□ -0.94
TRAPPC8-203ENST00000577474 SCARF1Q14162 830 aa9.17□□□□□ -0.94
TRAPPC8-203ENST00000577474 NNTQ13423 1086 aa9.16□□□□□ -0.94
TRAPPC8-203ENST00000577474 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
TRAPPC8-203ENST00000577474 TIMP2P16035 220 aa9.15□□□□□ -0.94
TRAPPC8-203ENST00000577474 MDM2Q00987 491 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC8-203ENST00000577474 CCNYL3P0C7X3 344 aa9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 MPNDQ8N594 471 aa9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 BAP1Q92560 729 aa9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC8-203ENST00000577474 PLEKHG3A1L390 1219 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms