RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 PLEKHH1Q9ULM0 1364 aa28.05■■■□□ 2.08
SCO1-202ENST00000577335 MST1RQ04912 1400 aa28.03■■■□□ 2.08
SCO1-202ENST00000577335 NBPF1Q3BBV0 1214 aa28.03■■■□□ 2.08
SCO1-202ENST00000577335 CCER1Q8TC90 406 aaPredicted RBP28.03■■■□□ 2.08
SCO1-202ENST00000577335 HSPA1LP34931 641 aa28.02■■■□□ 2.08
SCO1-202ENST00000577335 CDC42BPGQ6DT37 1551 aa28.02■■■□□ 2.08
SCO1-202ENST00000577335 ROBO1Q9Y6N7 1651 aa27.97■■■□□ 2.07
SCO1-202ENST00000577335 NBPF8Q3BBV2 869 aa27.97■■■□□ 2.07
SCO1-202ENST00000577335 C1orf167Q5SNV9 1468 aa27.96■■■□□ 2.07
SCO1-202ENST00000577335 BRINP3Q76B58 766 aa27.96■■■□□ 2.07
SCO1-202ENST00000577335 ROCK2O75116 1388 aaKnown RBP27.96■■■□□ 2.07
SCO1-202ENST00000577335 TRPM1Q7Z4N2 1603 aa27.95■■■□□ 2.06
SCO1-202ENST00000577335 SAFB2Q14151 953 aaKnown RBP eCLIP27.94■■■□□ 2.06
SCO1-202ENST00000577335 GPRASP1Q5JY77 1395 aa27.94■■■□□ 2.06
SCO1-202ENST00000577335 ADGRB2O60241 1585 aa27.9■■■□□ 2.06
SCO1-202ENST00000577335 ARHGEF28Q8N1W1 1705 aaKnown RBP27.89■■■□□ 2.06
SCO1-202ENST00000577335 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
SCO1-202ENST00000577335 EIF3AQ14152 1382 aaKnown RBP27.88■■■□□ 2.05
SCO1-202ENST00000577335 MINK1Q8N4C8 1332 aaPredicted RBP27.88■■■□□ 2.05
SCO1-202ENST00000577335 AHDC1Q5TGY3 1603 aaPredicted RBP27.87■■■□□ 2.05
SCO1-202ENST00000577335 CENPJQ9HC77 1338 aaPredicted RBP27.87■■■□□ 2.05
SCO1-202ENST00000577335 WASLO00401 505 aaPredicted RBP27.85■■■□□ 2.05
SCO1-202ENST00000577335 ORAI2Q96SN7 254 aa27.85■■■□□ 2.05
SCO1-202ENST00000577335 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
SCO1-202ENST00000577335 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
SCO1-202ENST00000577335 ESCO1Q5FWF5 840 aa27.84■■■□□ 2.05
SCO1-202ENST00000577335 CARD11Q9BXL7 1154 aa27.84■■■□□ 2.05
SCO1-202ENST00000577335 HIRIP3Q9BW71 556 aaPredicted RBP27.83■■■□□ 2.05
SCO1-202ENST00000577335 NUTM2FA1L443 756 aa27.8■■■□□ 2.04
SCO1-202ENST00000577335 PHLPP1O60346 1717 aa27.79■■■□□ 2.04
SCO1-202ENST00000577335 NPHP3Q7Z494 1330 aa27.78■■■□□ 2.04
SCO1-202ENST00000577335 COL16A1Q07092 1604 aaPredicted RBP27.77■■■□□ 2.04
SCO1-202ENST00000577335 NHSL1Q5SYE7 1610 aa27.77■■■□□ 2.04
SCO1-202ENST00000577335 TULP4Q9NRJ4 1543 aa27.77■■■□□ 2.04
SCO1-202ENST00000577335 JCADQ9P266 1359 aa27.76■■■□□ 2.03
SCO1-202ENST00000577335 SOS2Q07890 1332 aaPredicted RBP27.75■■■□□ 2.03
SCO1-202ENST00000577335 LRRC59Q96AG4 307 aaKnown RBP27.75■■■□□ 2.03
SCO1-202ENST00000577335 CDK19Q9BWU1 502 aa27.75■■■□□ 2.03
SCO1-202ENST00000577335 PHF8Q9UPP1 1060 aa27.74■■■□□ 2.03
SCO1-202ENST00000577335 SBNO2Q9Y2G9 1366 aa27.73■■■□□ 2.03
SCO1-202ENST00000577335 KIF1AQ12756 1690 aa27.72■■■□□ 2.03
SCO1-202ENST00000577335 PRR36Q9H6K5 1346 aa27.71■■■□□ 2.03
SCO1-202ENST00000577335 FOXO3O43524 673 aa27.71■■■□□ 2.03
SCO1-202ENST00000577335 DDX17Q92841 729 aaKnown RBP27.71■■■□□ 2.03
SCO1-202ENST00000577335 NUDT16Q96DE0 195 aaKnown RBP27.7■■■□□ 2.02
SCO1-202ENST00000577335 EVC2Q86UK5 1308 aa27.69■■■□□ 2.02
SCO1-202ENST00000577335 QRICH2Q9H0J4 1663 aa27.69■■■□□ 2.02
SCO1-202ENST00000577335 USP32Q8NFA0 1604 aa27.68■■■□□ 2.02
SCO1-202ENST00000577335 SLC24A1O60721 1099 aa27.68■■■□□ 2.02
SCO1-202ENST00000577335 CCDC61Q9Y6R9 512 aa27.68■■■□□ 2.02
SCO1-202ENST00000577335 SPATA31A6Q5VVP1 1343 aa27.67■■■□□ 2.02
SCO1-202ENST00000577335 ATP7BP35670 1465 aa27.67■■■□□ 2.02
SCO1-202ENST00000577335 SRPK2P78362 688 aaKnown RBP27.66■■■□□ 2.02
SCO1-202ENST00000577335 PXDNQ92626 1479 aa27.65■■■□□ 2.02
SCO1-202ENST00000577335 PSME1Q06323 249 aa27.65■■■□□ 2.02
SCO1-202ENST00000577335 KRT28Q7Z3Y7 464 aa27.63■■■□□ 2.01
SCO1-202ENST00000577335 PMFBP1Q8TBY8 1022 aa27.63■■■□□ 2.01
SCO1-202ENST00000577335 PLEKHG3A1L390 1219 aa27.61■■■□□ 2.01
SCO1-202ENST00000577335 SHPRHQ149N8 1683 aa27.61■■■□□ 2.01
SCO1-202ENST00000577335 PNPLA6Q8IY17 1366 aa27.6■■■□□ 2.01
SCO1-202ENST00000577335 NGDNQ8NEJ9 315 aaKnown RBP27.6■■■□□ 2.01
SCO1-202ENST00000577335 CABP2Q9NPB3 220 aa27.6■■■□□ 2.01
SCO1-202ENST00000577335 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
SCO1-202ENST00000577335 USP47Q96K76 1375 aa27.6■■■□□ 2.01
SCO1-202ENST00000577335 ST20-MTHFSA0A0A6YYL1 179 aa27.59■■■□□ 2.01
SCO1-202ENST00000577335 SBNO1A3KN83 1393 aa27.59■■■□□ 2.01
SCO1-202ENST00000577335 ITSN1Q15811 1721 aa27.58■■■□□ 2.01
SCO1-202ENST00000577335 MED1Q15648 1581 aaPredicted RBP27.58■■■□□ 2.01
SCO1-202ENST00000577335 XPCQ01831 940 aaPredicted RBP27.58■■■□□ 2.01
SCO1-202ENST00000577335 PUS7Q96PZ0 661 aaKnown RBP27.57■■■□□ 2
SCO1-202ENST00000577335 SPATA31A3Q5VYP0 1347 aa27.57■■■□□ 2
SCO1-202ENST00000577335 TESK2Q96S53 571 aa27.56■■■□□ 2
SCO1-202ENST00000577335 POLR3AO14802 1390 aaPredicted RBP27.56■■■□□ 2
SCO1-202ENST00000577335 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
SCO1-202ENST00000577335 PPIP5K1Q6PFW1 1433 aa27.54■■■□□ 2
SCO1-202ENST00000577335 TOPAZ1Q8N9V7 1692 aa27.54■■■□□ 2
SCO1-202ENST00000577335 TNS3Q68CZ2 1445 aa27.52■■■□□ 2
SCO1-202ENST00000577335 DISP3Q9P2K9 1392 aa27.52■■■□□ 2
SCO1-202ENST00000577335 ACEP12821 1306 aa27.52■■■□□ 2
SCO1-202ENST00000577335 ARHGEF10O15013 1369 aa27.51■■□□□ 1.99
SCO1-202ENST00000577335 CABP1Q9NZU7 370 aa27.5■■□□□ 1.99
SCO1-202ENST00000577335 BRD4O60885 1362 aaPredicted RBP27.49■■□□□ 1.99
SCO1-202ENST00000577335 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
SCO1-202ENST00000577335 NUTM2BA6NNL0 878 aaPredicted RBP27.47■■□□□ 1.99
SCO1-202ENST00000577335 NUTM2EB1AL46 878 aaPredicted RBP27.47■■□□□ 1.99
SCO1-202ENST00000577335 TMF1P82094 1093 aa27.47■■□□□ 1.99
SCO1-202ENST00000577335 NUTM2AQ8IVF1 878 aaPredicted RBP27.47■■□□□ 1.99
SCO1-202ENST00000577335 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
SCO1-202ENST00000577335 LRP6O75581 1613 aa27.46■■□□□ 1.99
SCO1-202ENST00000577335 EIF4G2P78344 907 aaKnown RBP eCLIP27.45■■□□□ 1.98
SCO1-202ENST00000577335 MEX3CQ5U5Q3 659 aaKnown RBP27.45■■□□□ 1.98
SCO1-202ENST00000577335 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.98
SCO1-202ENST00000577335 CDCA8Q53HL2 280 aa27.44■■□□□ 1.98
SCO1-202ENST00000577335 LMOD2Q6P5Q4 547 aa27.42■■□□□ 1.98
SCO1-202ENST00000577335 TRPM3Q9HCF6 1732 aaPredicted RBP27.41■■□□□ 1.98
SCO1-202ENST00000577335 NINLQ9Y2I6 1382 aa27.41■■□□□ 1.98
SCO1-202ENST00000577335 PAK3O75914 559 aaPredicted RBP27.41■■□□□ 1.98
SCO1-202ENST00000577335 USP6P35125 1406 aa27.39■■□□□ 1.97
SCO1-202ENST00000577335 CPSF1Q10570 1443 aaKnown RBP27.38■■□□□ 1.97
SCO1-202ENST00000577335 TMC1Q8TDI8 760 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms