RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
COPS3-214ENST00000577246 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
COPS3-214ENST00000577246 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
COPS3-214ENST00000577246 ESCO1Q5FWF5 840 aa20.18■□□□□ 0.82
COPS3-214ENST00000577246 NAIPQ13075 1403 aa20.18■□□□□ 0.82
COPS3-214ENST00000577246 MYOM2P54296 1465 aa20.18■□□□□ 0.82
COPS3-214ENST00000577246 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
COPS3-214ENST00000577246 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
COPS3-214ENST00000577246 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
COPS3-214ENST00000577246 PXDNQ92626 1479 aa20.12■□□□□ 0.81
COPS3-214ENST00000577246 RRBP1Q9P2E9 1410 aaKnown RBP20.12■□□□□ 0.81
COPS3-214ENST00000577246 BCL9LQ86UU0 1499 aa20.11■□□□□ 0.81
COPS3-214ENST00000577246 FOXO3O43524 673 aa20.11■□□□□ 0.81
COPS3-214ENST00000577246 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
COPS3-214ENST00000577246 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
COPS3-214ENST00000577246 TECPR2O15040 1411 aa20.08■□□□□ 0.8
COPS3-214ENST00000577246 PPLO60437 1756 aa20.08■□□□□ 0.8
COPS3-214ENST00000577246 XPCQ01831 940 aaPredicted RBP20.07■□□□□ 0.8
COPS3-214ENST00000577246 UNC5CLQ8IV45 518 aa20.06■□□□□ 0.8
COPS3-214ENST00000577246 ANKRD30BQ9BXX2 1392 aa20.06■□□□□ 0.8
COPS3-214ENST00000577246 CCDC144AA2RUR9 1427 aa20.05■□□□□ 0.8
COPS3-214ENST00000577246 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
COPS3-214ENST00000577246 STK26Q9P289 416 aa20.04■□□□□ 0.8
COPS3-214ENST00000577246 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
COPS3-214ENST00000577246 MARF1Q9Y4F3 1742 aaKnown RBP20.03■□□□□ 0.8
COPS3-214ENST00000577246 SPATA31A3Q5VYP0 1347 aa20.02■□□□□ 0.8
COPS3-214ENST00000577246 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.8
COPS3-214ENST00000577246 SLIT2O94813 1529 aa20.02■□□□□ 0.8
COPS3-214ENST00000577246 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.02■□□□□ 0.8
COPS3-214ENST00000577246 NUTM2FA1L443 756 aa20.02■□□□□ 0.8
COPS3-214ENST00000577246 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
COPS3-214ENST00000577246 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
COPS3-214ENST00000577246 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.8
COPS3-214ENST00000577246 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
COPS3-214ENST00000577246 EP400Q96L91 3159 aa20.01■□□□□ 0.79
COPS3-214ENST00000577246 KIF1AQ12756 1690 aa20■□□□□ 0.79
COPS3-214ENST00000577246 PSME1Q06323 249 aa19.99■□□□□ 0.79
COPS3-214ENST00000577246 RGL3Q3MIN7 710 aa19.99■□□□□ 0.79
COPS3-214ENST00000577246 KRT28Q7Z3Y7 464 aa19.98■□□□□ 0.79
COPS3-214ENST00000577246 PIK3C2GO75747 1445 aa19.97■□□□□ 0.79
COPS3-214ENST00000577246 SPATA31E1Q6ZUB1 1445 aa19.97■□□□□ 0.79
COPS3-214ENST00000577246 SIRT1Q96EB6 747 aa19.97■□□□□ 0.79
COPS3-214ENST00000577246 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
COPS3-214ENST00000577246 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
COPS3-214ENST00000577246 GLI3P10071 1580 aa19.96■□□□□ 0.79
COPS3-214ENST00000577246 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
COPS3-214ENST00000577246 YTHDC2Q9H6S0 1430 aaKnown RBP19.96■□□□□ 0.79
COPS3-214ENST00000577246 TMEM132EQ6IEE7 984 aa19.96■□□□□ 0.79
COPS3-214ENST00000577246 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.79
COPS3-214ENST00000577246 VPS72Q15906 364 aa19.95■□□□□ 0.78
COPS3-214ENST00000577246 SEPT12Q8IYM1 358 aa19.95■□□□□ 0.78
COPS3-214ENST00000577246 FMN2Q9NZ56 1722 aa19.95■□□□□ 0.78
COPS3-214ENST00000577246 PHF8Q9UPP1 1060 aa19.94■□□□□ 0.78
COPS3-214ENST00000577246 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
COPS3-214ENST00000577246 CCDC9Q9Y3X0 531 aaKnown RBP19.93■□□□□ 0.78
COPS3-214ENST00000577246 SBNO1A3KN83 1393 aa19.93■□□□□ 0.78
COPS3-214ENST00000577246 ONECUT3O60422 494 aaPredicted RBP19.9■□□□□ 0.78
COPS3-214ENST00000577246 KRT27Q7Z3Y8 459 aa19.9■□□□□ 0.78
COPS3-214ENST00000577246 DEFB132Q7Z7B7 95 aa19.9■□□□□ 0.78
COPS3-214ENST00000577246 ACIN1Q9UKV3 1341 aaKnown RBP19.9■□□□□ 0.78
COPS3-214ENST00000577246 DHX57Q6P158 1386 aaKnown RBP19.9■□□□□ 0.78
COPS3-214ENST00000577246 IFT172Q9UG01 1749 aa19.9■□□□□ 0.78
COPS3-214ENST00000577246 LMOD2Q6P5Q4 547 aa19.89■□□□□ 0.77
COPS3-214ENST00000577246 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
COPS3-214ENST00000577246 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
COPS3-214ENST00000577246 C14orf93Q9H972 538 aaKnown RBP19.88■□□□□ 0.77
COPS3-214ENST00000577246 NWD2Q9ULI1 1742 aa19.88■□□□□ 0.77
COPS3-214ENST00000577246 A0A0G2JS52 829 aa19.87■□□□□ 0.77
COPS3-214ENST00000577246 MYT1Q01538 1121 aa19.87■□□□□ 0.77
COPS3-214ENST00000577246 CABLES1Q8TDN4 633 aa19.87■□□□□ 0.77
COPS3-214ENST00000577246 BAG6P46379 1132 aa19.86■□□□□ 0.77
COPS3-214ENST00000577246 ANKARQ7Z5J8 1434 aa19.85■□□□□ 0.77
COPS3-214ENST00000577246 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
COPS3-214ENST00000577246 PRAM1Q96QH2 718 aa19.84■□□□□ 0.77
COPS3-214ENST00000577246 PLCH1Q4KWH8 1693 aa19.84■□□□□ 0.77
COPS3-214ENST00000577246 POGKQ9P215 609 aa19.83■□□□□ 0.77
COPS3-214ENST00000577246 LRP5O75197 1615 aa19.83■□□□□ 0.76
COPS3-214ENST00000577246 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.76
COPS3-214ENST00000577246 FAM83GA6ND36 823 aa19.82■□□□□ 0.76
COPS3-214ENST00000577246 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
COPS3-214ENST00000577246 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
COPS3-214ENST00000577246 CFAP70Q5T0N1 1121 aa19.81■□□□□ 0.76
COPS3-214ENST00000577246 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
COPS3-214ENST00000577246 DLC1Q96QB1 1528 aa19.8■□□□□ 0.76
COPS3-214ENST00000577246 FAM98CQ17RN3 349 aaKnown RBP19.79■□□□□ 0.76
COPS3-214ENST00000577246 PMFBP1Q8TBY8 1022 aa19.79■□□□□ 0.76
COPS3-214ENST00000577246 BTG4Q9NY30 223 aa19.79■□□□□ 0.76
COPS3-214ENST00000577246 ABCA3Q99758 1704 aa19.79■□□□□ 0.76
COPS3-214ENST00000577246 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
COPS3-214ENST00000577246 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
COPS3-214ENST00000577246 PSDA5PKW4 1024 aaPredicted RBP19.75■□□□□ 0.75
COPS3-214ENST00000577246 HRCP23327 699 aa19.75■□□□□ 0.75
COPS3-214ENST00000577246 COL14A1Q05707 1796 aaKnown RBP19.74■□□□□ 0.75
COPS3-214ENST00000577246 NRAPQ86VF7 1730 aa19.73■□□□□ 0.75
COPS3-214ENST00000577246 SPATA31A5Q5VU36 1347 aa19.73■□□□□ 0.75
COPS3-214ENST00000577246 SPATA31A7Q8IWB4 1347 aa19.73■□□□□ 0.75
COPS3-214ENST00000577246 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
COPS3-214ENST00000577246 DISP2A7MBM2 1401 aa19.71■□□□□ 0.75
COPS3-214ENST00000577246 EN1Q05925 392 aaPredicted RBP19.71■□□□□ 0.75
COPS3-214ENST00000577246 NGDNQ8NEJ9 315 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms