RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 RBM33Q96EV2 1170 aaKnown RBP12.02□□□□□ -0.49
PRPF8-213ENST00000576407 LRRC7Q96NW7 1537 aa12.01□□□□□ -0.49
PRPF8-213ENST00000576407 QRICH2Q9H0J4 1663 aa12.01□□□□□ -0.49
PRPF8-213ENST00000576407 HIRIP3Q9BW71 556 aaPredicted RBP12.01□□□□□ -0.49
PRPF8-213ENST00000576407 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
PRPF8-213ENST00000576407 SIPA1L2Q9P2F8 1722 aaPredicted RBP12□□□□□ -0.49
PRPF8-213ENST00000576407 TESK2Q96S53 571 aa11.99□□□□□ -0.49
PRPF8-213ENST00000576407 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
PRPF8-213ENST00000576407 XIRP1Q702N8 1843 aaKnown RBP11.99□□□□□ -0.49
PRPF8-213ENST00000576407 NALCNQ8IZF0 1738 aa11.98□□□□□ -0.49
PRPF8-213ENST00000576407 NCOA3Q9Y6Q9 1424 aa11.98□□□□□ -0.49
PRPF8-213ENST00000576407 SBNO2Q9Y2G9 1366 aa11.98□□□□□ -0.49
PRPF8-213ENST00000576407 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
PRPF8-213ENST00000576407 ADGRL3Q9HAR2 1447 aa11.97□□□□□ -0.49
PRPF8-213ENST00000576407 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
PRPF8-213ENST00000576407 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.5
PRPF8-213ENST00000576407 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
PRPF8-213ENST00000576407 MSH6P52701 1360 aa11.94□□□□□ -0.5
PRPF8-213ENST00000576407 DISP3Q9P2K9 1392 aa11.94□□□□□ -0.5
PRPF8-213ENST00000576407 EVC2Q86UK5 1308 aa11.94□□□□□ -0.5
PRPF8-213ENST00000576407 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
PRPF8-213ENST00000576407 WASLO00401 505 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-213ENST00000576407 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
PRPF8-213ENST00000576407 TMF1P82094 1093 aa11.94□□□□□ -0.5
PRPF8-213ENST00000576407 CERKQ8TCT0 537 aa11.93□□□□□ -0.5
PRPF8-213ENST00000576407 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
PRPF8-213ENST00000576407 DCCP43146 1447 aa11.93□□□□□ -0.5
PRPF8-213ENST00000576407 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-213ENST00000576407 FMN2Q9NZ56 1722 aa11.91□□□□□ -0.5
PRPF8-213ENST00000576407 ATF3P18847 181 aa11.91□□□□□ -0.5
PRPF8-213ENST00000576407 SRPK2P78362 688 aaKnown RBP11.91□□□□□ -0.5
PRPF8-213ENST00000576407 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
PRPF8-213ENST00000576407 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
PRPF8-213ENST00000576407 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
PRPF8-213ENST00000576407 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
PRPF8-213ENST00000576407 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
PRPF8-213ENST00000576407 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
PRPF8-213ENST00000576407 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
PRPF8-213ENST00000576407 ATP7BP35670 1465 aa11.89□□□□□ -0.51
PRPF8-213ENST00000576407 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
PRPF8-213ENST00000576407 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
PRPF8-213ENST00000576407 MST1RQ04912 1400 aa11.88□□□□□ -0.51
PRPF8-213ENST00000576407 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
PRPF8-213ENST00000576407 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
PRPF8-213ENST00000576407 NUDT16Q96DE0 195 aaKnown RBP11.88□□□□□ -0.51
PRPF8-213ENST00000576407 CCDC7Q96M83 1385 aa11.88□□□□□ -0.51
PRPF8-213ENST00000576407 WASHC2AQ641Q2 1341 aa11.87□□□□□ -0.51
PRPF8-213ENST00000576407 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
PRPF8-213ENST00000576407 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
PRPF8-213ENST00000576407 C1orf167Q5SNV9 1468 aa11.87□□□□□ -0.51
PRPF8-213ENST00000576407 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
PRPF8-213ENST00000576407 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
PRPF8-213ENST00000576407 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
PRPF8-213ENST00000576407 TOPAZ1Q8N9V7 1692 aa11.86□□□□□ -0.51
PRPF8-213ENST00000576407 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
PRPF8-213ENST00000576407 ITSN1Q15811 1721 aa11.85□□□□□ -0.51
PRPF8-213ENST00000576407 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
PRPF8-213ENST00000576407 MYOM1P52179 1685 aa11.84□□□□□ -0.51
PRPF8-213ENST00000576407 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
PRPF8-213ENST00000576407 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
PRPF8-213ENST00000576407 CABP1Q9NZU7 370 aa11.84□□□□□ -0.51
PRPF8-213ENST00000576407 TOM1O60784 492 aa11.83□□□□□ -0.52
PRPF8-213ENST00000576407 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
PRPF8-213ENST00000576407 PHF8Q9UPP1 1060 aa11.83□□□□□ -0.52
PRPF8-213ENST00000576407 NINLQ9Y2I6 1382 aa11.82□□□□□ -0.52
PRPF8-213ENST00000576407 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
PRPF8-213ENST00000576407 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
PRPF8-213ENST00000576407 PMFBP1Q8TBY8 1022 aa11.82□□□□□ -0.52
PRPF8-213ENST00000576407 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
PRPF8-213ENST00000576407 ACEP12821 1306 aa11.81□□□□□ -0.52
PRPF8-213ENST00000576407 KIF1AQ12756 1690 aa11.81□□□□□ -0.52
PRPF8-213ENST00000576407 NGDNQ8NEJ9 315 aaKnown RBP11.8□□□□□ -0.52
PRPF8-213ENST00000576407 CD163L1Q9NR16 1453 aa11.8□□□□□ -0.52
PRPF8-213ENST00000576407 ROBO1Q9Y6N7 1651 aa11.8□□□□□ -0.52
PRPF8-213ENST00000576407 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
PRPF8-213ENST00000576407 CPSF1Q10570 1443 aaKnown RBP11.79□□□□□ -0.52
PRPF8-213ENST00000576407 FOXO3O43524 673 aa11.79□□□□□ -0.52
PRPF8-213ENST00000576407 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
PRPF8-213ENST00000576407 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
PRPF8-213ENST00000576407 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
PRPF8-213ENST00000576407 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
PRPF8-213ENST00000576407 AKAP12Q02952 1782 aa11.78□□□□□ -0.52
PRPF8-213ENST00000576407 HDGFL2Q7Z4V5 671 aaPredicted RBP11.78□□□□□ -0.52
PRPF8-213ENST00000576407 PANK3Q9H999 370 aa11.78□□□□□ -0.52
PRPF8-213ENST00000576407 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
PRPF8-213ENST00000576407 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
PRPF8-213ENST00000576407 DDX17Q92841 729 aaKnown RBP11.77□□□□□ -0.53
PRPF8-213ENST00000576407 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
PRPF8-213ENST00000576407 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
PRPF8-213ENST00000576407 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
PRPF8-213ENST00000576407 NHSL1Q5SYE7 1610 aa11.76□□□□□ -0.53
PRPF8-213ENST00000576407 XPCQ01831 940 aaPredicted RBP11.76□□□□□ -0.53
PRPF8-213ENST00000576407 PSME1Q06323 249 aa11.76□□□□□ -0.53
PRPF8-213ENST00000576407 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
PRPF8-213ENST00000576407 MON2Q7Z3U7 1717 aa11.76□□□□□ -0.53
PRPF8-213ENST00000576407 USP6P35125 1406 aa11.76□□□□□ -0.53
PRPF8-213ENST00000576407 KRT28Q7Z3Y7 464 aa11.75□□□□□ -0.53
PRPF8-213ENST00000576407 PXDNQ92626 1479 aa11.75□□□□□ -0.53
PRPF8-213ENST00000576407 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
PRPF8-213ENST00000576407 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms