RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TECPR2O15040 1411 aa19.22■□□□□ 0.67
RPAIN-216ENST00000575599 SIN3AQ96ST3 1273 aa19.21■□□□□ 0.67
RPAIN-216ENST00000575599 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
RPAIN-216ENST00000575599 STAC3Q96MF2 364 aa19.2■□□□□ 0.66
RPAIN-216ENST00000575599 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
RPAIN-216ENST00000575599 MST1RQ04912 1400 aa19.19■□□□□ 0.66
RPAIN-216ENST00000575599 WAPLQ7Z5K2 1190 aa19.19■□□□□ 0.66
RPAIN-216ENST00000575599 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
RPAIN-216ENST00000575599 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
RPAIN-216ENST00000575599 PHLPP1O60346 1717 aa19.16■□□□□ 0.66
RPAIN-216ENST00000575599 CDC42BPGQ6DT37 1551 aa19.14■□□□□ 0.65
RPAIN-216ENST00000575599 BRINP3Q76B58 766 aa19.14■□□□□ 0.65
RPAIN-216ENST00000575599 L3MBTL2Q969R5 705 aa19.13■□□□□ 0.65
RPAIN-216ENST00000575599 DLC1Q96QB1 1528 aa19.13■□□□□ 0.65
RPAIN-216ENST00000575599 C1orf167Q5SNV9 1468 aa19.12■□□□□ 0.65
RPAIN-216ENST00000575599 SAFB2Q14151 953 aaKnown RBP eCLIP19.12■□□□□ 0.65
RPAIN-216ENST00000575599 PRAM1Q96QH2 718 aa19.12■□□□□ 0.65
RPAIN-216ENST00000575599 TRAK1Q9UPV9 953 aa19.12■□□□□ 0.65
RPAIN-216ENST00000575599 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
RPAIN-216ENST00000575599 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
RPAIN-216ENST00000575599 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
RPAIN-216ENST00000575599 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
RPAIN-216ENST00000575599 SIRT1Q96EB6 747 aa19.1■□□□□ 0.65
RPAIN-216ENST00000575599 POGKQ9P215 609 aa19.1■□□□□ 0.65
RPAIN-216ENST00000575599 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
RPAIN-216ENST00000575599 NHSL1Q5SYE7 1610 aa19.08■□□□□ 0.64
RPAIN-216ENST00000575599 NUTM2FA1L443 756 aa19.07■□□□□ 0.64
RPAIN-216ENST00000575599 ARHGEF28Q8N1W1 1705 aaKnown RBP19.07■□□□□ 0.64
RPAIN-216ENST00000575599 FMN2Q9NZ56 1722 aa19.07■□□□□ 0.64
RPAIN-216ENST00000575599 ORAI2Q96SN7 254 aa19.06■□□□□ 0.64
RPAIN-216ENST00000575599 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
RPAIN-216ENST00000575599 DDX17Q92841 729 aaKnown RBP19.06■□□□□ 0.64
RPAIN-216ENST00000575599 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
RPAIN-216ENST00000575599 ESCO1Q5FWF5 840 aa19.04■□□□□ 0.64
RPAIN-216ENST00000575599 JCADQ9P266 1359 aa19.04■□□□□ 0.64
RPAIN-216ENST00000575599 MINK1Q8N4C8 1332 aaPredicted RBP19.03■□□□□ 0.64
RPAIN-216ENST00000575599 ADGRB2O60241 1585 aa19.03■□□□□ 0.64
RPAIN-216ENST00000575599 HIRIP3Q9BW71 556 aaPredicted RBP19.03■□□□□ 0.64
RPAIN-216ENST00000575599 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
RPAIN-216ENST00000575599 SHPRHQ149N8 1683 aa18.99■□□□□ 0.63
RPAIN-216ENST00000575599 RGPD8O14715 1765 aaPredicted RBP18.98■□□□□ 0.63
RPAIN-216ENST00000575599 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
RPAIN-216ENST00000575599 KIF1AQ12756 1690 aa18.97■□□□□ 0.63
RPAIN-216ENST00000575599 NBPF8Q3BBV2 869 aa18.96■□□□□ 0.63
RPAIN-216ENST00000575599 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
RPAIN-216ENST00000575599 FOXO3O43524 673 aa18.95■□□□□ 0.62
RPAIN-216ENST00000575599 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
RPAIN-216ENST00000575599 NPHP3Q7Z494 1330 aa18.95■□□□□ 0.62
RPAIN-216ENST00000575599 WASLO00401 505 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-216ENST00000575599 XPCQ01831 940 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-216ENST00000575599 SOS2Q07890 1332 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-216ENST00000575599 SPATA31A6Q5VVP1 1343 aa18.94■□□□□ 0.62
RPAIN-216ENST00000575599 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
RPAIN-216ENST00000575599 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
RPAIN-216ENST00000575599 TULP4Q9NRJ4 1543 aa18.94■□□□□ 0.62
RPAIN-216ENST00000575599 LRP6O75581 1613 aa18.93■□□□□ 0.62
RPAIN-216ENST00000575599 PHF8Q9UPP1 1060 aa18.93■□□□□ 0.62
RPAIN-216ENST00000575599 CENPJQ9HC77 1338 aaPredicted RBP18.93■□□□□ 0.62
RPAIN-216ENST00000575599 PNPLA6Q8IY17 1366 aa18.93■□□□□ 0.62
RPAIN-216ENST00000575599 PXDNQ92626 1479 aa18.92■□□□□ 0.62
RPAIN-216ENST00000575599 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
RPAIN-216ENST00000575599 NUTM2BA6NNL0 878 aaPredicted RBP18.92■□□□□ 0.62
RPAIN-216ENST00000575599 NUTM2EB1AL46 878 aaPredicted RBP18.92■□□□□ 0.62
RPAIN-216ENST00000575599 NUTM2AQ8IVF1 878 aaPredicted RBP18.92■□□□□ 0.62
RPAIN-216ENST00000575599 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
RPAIN-216ENST00000575599 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
RPAIN-216ENST00000575599 MEX3CQ5U5Q3 659 aaKnown RBP18.9■□□□□ 0.62
RPAIN-216ENST00000575599 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
RPAIN-216ENST00000575599 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
RPAIN-216ENST00000575599 ILDR2Q71H61 639 aa18.88■□□□□ 0.61
RPAIN-216ENST00000575599 CCER1Q8TC90 406 aaPredicted RBP18.88■□□□□ 0.61
RPAIN-216ENST00000575599 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
RPAIN-216ENST00000575599 ATP7BP35670 1465 aa18.88■□□□□ 0.61
RPAIN-216ENST00000575599 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
RPAIN-216ENST00000575599 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
RPAIN-216ENST00000575599 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
RPAIN-216ENST00000575599 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
RPAIN-216ENST00000575599 DSG3P32926 999 aa18.85■□□□□ 0.61
RPAIN-216ENST00000575599 NUDT16Q96DE0 195 aaKnown RBP18.85■□□□□ 0.61
RPAIN-216ENST00000575599 COL22A1Q8NFW1 1626 aaPredicted RBP18.84■□□□□ 0.61
RPAIN-216ENST00000575599 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
RPAIN-216ENST00000575599 PSME1Q06323 249 aa18.84■□□□□ 0.61
RPAIN-216ENST00000575599 RGS17Q9UGC6 210 aaPredicted RBP18.83■□□□□ 0.61
RPAIN-216ENST00000575599 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.61
RPAIN-216ENST00000575599 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
RPAIN-216ENST00000575599 SPATA31A3Q5VYP0 1347 aa18.82■□□□□ 0.6
RPAIN-216ENST00000575599 TNS3Q68CZ2 1445 aa18.82■□□□□ 0.6
RPAIN-216ENST00000575599 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
RPAIN-216ENST00000575599 ADAMTS2O95450 1211 aa18.81■□□□□ 0.6
RPAIN-216ENST00000575599 SBNO1A3KN83 1393 aa18.8■□□□□ 0.6
RPAIN-216ENST00000575599 LMOD2Q6P5Q4 547 aa18.8■□□□□ 0.6
RPAIN-216ENST00000575599 TRPM3Q9HCF6 1732 aaPredicted RBP18.79■□□□□ 0.6
RPAIN-216ENST00000575599 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
RPAIN-216ENST00000575599 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
RPAIN-216ENST00000575599 C8orf37Q96NL8 207 aa18.79■□□□□ 0.6
RPAIN-216ENST00000575599 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
RPAIN-216ENST00000575599 CAPN15O75808 1086 aa18.78■□□□□ 0.6
RPAIN-216ENST00000575599 PPIP5K1Q6PFW1 1433 aa18.78■□□□□ 0.6
RPAIN-216ENST00000575599 TIMELESSQ9UNS1 1208 aa18.77■□□□□ 0.6
RPAIN-216ENST00000575599 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms