RNA–Protein interactions for RNA: ENST00000575243.5

CCNE1-205, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-205ENST00000575243 PPARGC1BQ86YN6 1023 aaKnown RBP28.87■■■□□ 2.21
CCNE1-205ENST00000575243 PRAG1Q86YV5 1406 aa28.86■■■□□ 2.21
CCNE1-205ENST00000575243 EP400Q96L91 3159 aa28.85■■■□□ 2.21
CCNE1-205ENST00000575243 ESCO1Q5FWF5 840 aa28.84■■■□□ 2.21
CCNE1-205ENST00000575243 GJD4Q96KN9 370 aaPredicted RBP28.84■■■□□ 2.21
CCNE1-205ENST00000575243 NPHP3Q7Z494 1330 aa28.82■■■□□ 2.2
CCNE1-205ENST00000575243 HFM1A2PYH4 1435 aa28.82■■■□□ 2.2
CCNE1-205ENST00000575243 KIF1BO60333 1816 aa28.81■■■□□ 2.2
CCNE1-205ENST00000575243 XPCQ01831 940 aaPredicted RBP28.81■■■□□ 2.2
CCNE1-205ENST00000575243 PXDNQ92626 1479 aa28.8■■■□□ 2.2
CCNE1-205ENST00000575243 FOXO3O43524 673 aa28.8■■■□□ 2.2
CCNE1-205ENST00000575243 RPGRIP1LQ68CZ1 1315 aa28.77■■■□□ 2.2
CCNE1-205ENST00000575243 MARF1Q9Y4F3 1742 aaKnown RBP28.73■■■□□ 2.19
CCNE1-205ENST00000575243 UNC5CLQ8IV45 518 aa28.72■■■□□ 2.19
CCNE1-205ENST00000575243 CDC42BPGQ6DT37 1551 aa28.71■■■□□ 2.19
CCNE1-205ENST00000575243 NUTM2FA1L443 756 aa28.71■■■□□ 2.19
CCNE1-205ENST00000575243 RALGAPBQ86X10 1494 aa28.7■■■□□ 2.18
CCNE1-205ENST00000575243 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
CCNE1-205ENST00000575243 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
CCNE1-205ENST00000575243 DEFB132Q7Z7B7 95 aa28.69■■■□□ 2.18
CCNE1-205ENST00000575243 GLI3P10071 1580 aa28.69■■■□□ 2.18
CCNE1-205ENST00000575243 SLIT2O94813 1529 aa28.69■■■□□ 2.18
CCNE1-205ENST00000575243 NAIPQ13075 1403 aa28.69■■■□□ 2.18
CCNE1-205ENST00000575243 LRPPRCP42704 1394 aaKnown RBP28.68■■■□□ 2.18
CCNE1-205ENST00000575243 SPATA31A3Q5VYP0 1347 aa28.66■■■□□ 2.18
CCNE1-205ENST00000575243 PPLO60437 1756 aa28.65■■■□□ 2.18
CCNE1-205ENST00000575243 STK26Q9P289 416 aa28.65■■■□□ 2.18
CCNE1-205ENST00000575243 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.65■■■□□ 2.18
CCNE1-205ENST00000575243 ADGRF5Q8IZF2 1346 aa28.64■■■□□ 2.17
CCNE1-205ENST00000575243 SEPT12Q8IYM1 358 aa28.61■■■□□ 2.17
CCNE1-205ENST00000575243 PLEKHH1Q9ULM0 1364 aa28.61■■■□□ 2.17
CCNE1-205ENST00000575243 KRT28Q7Z3Y7 464 aa28.6■■■□□ 2.17
CCNE1-205ENST00000575243 SLC4A1APQ9BWU0 796 aaKnown RBP28.6■■■□□ 2.17
CCNE1-205ENST00000575243 TECPR2O15040 1411 aa28.6■■■□□ 2.17
CCNE1-205ENST00000575243 BRWD3Q6RI45 1802 aa28.59■■■□□ 2.17
CCNE1-205ENST00000575243 ONECUT3O60422 494 aaPredicted RBP28.57■■■□□ 2.16
CCNE1-205ENST00000575243 TMEM132EQ6IEE7 984 aa28.57■■■□□ 2.16
CCNE1-205ENST00000575243 ABCC11Q96J66 1382 aa28.57■■■□□ 2.16
CCNE1-205ENST00000575243 SF3B2Q13435 895 aaKnown RBP28.56■■■□□ 2.16
CCNE1-205ENST00000575243 VPS72Q15906 364 aa28.56■■■□□ 2.16
CCNE1-205ENST00000575243 CABLES1Q8TDN4 633 aa28.55■■■□□ 2.16
CCNE1-205ENST00000575243 USP32Q8NFA0 1604 aa28.54■■■□□ 2.16
CCNE1-205ENST00000575243 CCDC144AA2RUR9 1427 aa28.53■■■□□ 2.16
CCNE1-205ENST00000575243 RRBP1Q9P2E9 1410 aaKnown RBP28.53■■■□□ 2.16
CCNE1-205ENST00000575243 RGL3Q3MIN7 710 aa28.53■■■□□ 2.16
CCNE1-205ENST00000575243 KRT27Q7Z3Y8 459 aa28.51■■■□□ 2.15
CCNE1-205ENST00000575243 FMN2Q9NZ56 1722 aa28.51■■■□□ 2.15
CCNE1-205ENST00000575243 PLEKHG5O94827 1062 aa28.49■■■□□ 2.15
CCNE1-205ENST00000575243 HAP1P54257 671 aaPredicted RBP28.48■■■□□ 2.15
CCNE1-205ENST00000575243 PHF8Q9UPP1 1060 aa28.48■■■□□ 2.15
CCNE1-205ENST00000575243 CCDC9Q9Y3X0 531 aaKnown RBP28.48■■■□□ 2.15
CCNE1-205ENST00000575243 KIF1AQ12756 1690 aa28.48■■■□□ 2.15
CCNE1-205ENST00000575243 TNS3Q68CZ2 1445 aa28.47■■■□□ 2.15
CCNE1-205ENST00000575243 SPATA31E1Q6ZUB1 1445 aa28.47■■■□□ 2.15
CCNE1-205ENST00000575243 LRP5O75197 1615 aa28.47■■■□□ 2.15
CCNE1-205ENST00000575243 PSDA5PKW4 1024 aaPredicted RBP28.46■■■□□ 2.15
CCNE1-205ENST00000575243 PSME1Q06323 249 aa28.46■■■□□ 2.15
CCNE1-205ENST00000575243 FAM83GA6ND36 823 aa28.45■■■□□ 2.14
CCNE1-205ENST00000575243 SIRT1Q96EB6 747 aa28.45■■■□□ 2.14
CCNE1-205ENST00000575243 ANKRD30BQ9BXX2 1392 aa28.45■■■□□ 2.14
CCNE1-205ENST00000575243 YTHDC2Q9H6S0 1430 aaKnown RBP28.44■■■□□ 2.14
CCNE1-205ENST00000575243 KNDC1Q76NI1 1749 aa28.44■■■□□ 2.14
CCNE1-205ENST00000575243 HRCP23327 699 aa28.43■■■□□ 2.14
CCNE1-205ENST00000575243 PIK3C2GO75747 1445 aa28.42■■■□□ 2.14
CCNE1-205ENST00000575243 PLCH1Q4KWH8 1693 aa28.42■■■□□ 2.14
CCNE1-205ENST00000575243 SBNO1A3KN83 1393 aa28.41■■■□□ 2.14
CCNE1-205ENST00000575243 LMOD2Q6P5Q4 547 aa28.41■■■□□ 2.14
CCNE1-205ENST00000575243 NWD2Q9ULI1 1742 aa28.4■■■□□ 2.14
CCNE1-205ENST00000575243 RGPD8O14715 1765 aaPredicted RBP28.4■■■□□ 2.14
CCNE1-205ENST00000575243 BAG6P46379 1132 aa28.4■■■□□ 2.14
CCNE1-205ENST00000575243 IFT172Q9UG01 1749 aa28.38■■■□□ 2.13
CCNE1-205ENST00000575243 FAM98CQ17RN3 349 aaKnown RBP28.37■■■□□ 2.13
CCNE1-205ENST00000575243 NRXN1Q9ULB1 1477 aa28.37■■■□□ 2.13
CCNE1-205ENST00000575243 C14orf93Q9H972 538 aaKnown RBP28.36■■■□□ 2.13
CCNE1-205ENST00000575243 ARHGEF10O15013 1369 aa28.36■■■□□ 2.13
CCNE1-205ENST00000575243 A0A0G2JS52 829 aa28.35■■■□□ 2.13
CCNE1-205ENST00000575243 MYT1Q01538 1121 aa28.35■■■□□ 2.13
CCNE1-205ENST00000575243 EN1Q05925 392 aaPredicted RBP28.35■■■□□ 2.13
CCNE1-205ENST00000575243 ABCA3Q99758 1704 aa28.34■■■□□ 2.13
CCNE1-205ENST00000575243 PMFBP1Q8TBY8 1022 aa28.33■■■□□ 2.13
CCNE1-205ENST00000575243 BTG4Q9NY30 223 aa28.33■■■□□ 2.13
CCNE1-205ENST00000575243 SAFB2Q14151 953 aaKnown RBP eCLIP28.32■■■□□ 2.12
CCNE1-205ENST00000575243 FAM182BQ5T319 152 aa28.32■■■□□ 2.12
CCNE1-205ENST00000575243 CFAP70Q5T0N1 1121 aa28.31■■■□□ 2.12
CCNE1-205ENST00000575243 MPHOSPH9Q99550 1183 aa28.31■■■□□ 2.12
CCNE1-205ENST00000575243 PRAM1Q96QH2 718 aa28.3■■■□□ 2.12
CCNE1-205ENST00000575243 NRAPQ86VF7 1730 aa28.29■■■□□ 2.12
CCNE1-205ENST00000575243 DHX57Q6P158 1386 aaKnown RBP28.28■■■□□ 2.12
CCNE1-205ENST00000575243 R3HDM1Q15032 1099 aaKnown RBP28.28■■■□□ 2.12
CCNE1-205ENST00000575243 SPATA31A5Q5VU36 1347 aa28.24■■■□□ 2.11
CCNE1-205ENST00000575243 SPATA31A7Q8IWB4 1347 aa28.24■■■□□ 2.11
CCNE1-205ENST00000575243 ANKARQ7Z5J8 1434 aa28.23■■■□□ 2.11
CCNE1-205ENST00000575243 EZH2Q15910 746 aaKnown RBP28.22■■■□□ 2.11
CCNE1-205ENST00000575243 POGKQ9P215 609 aa28.21■■■□□ 2.11
CCNE1-205ENST00000575243 TRPM3Q9HCF6 1732 aaPredicted RBP28.21■■■□□ 2.11
CCNE1-205ENST00000575243 RGPD1P0DJD0 1748 aa28.2■■■□□ 2.1
CCNE1-205ENST00000575243 COL14A1Q05707 1796 aaKnown RBP28.19■■■□□ 2.1
CCNE1-205ENST00000575243 DISP2A7MBM2 1401 aa28.19■■■□□ 2.1
CCNE1-205ENST00000575243 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
CCNE1-205ENST00000575243 CAMKK2Q96RR4 588 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms