RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 HFM1A2PYH4 1435 aa31.45■■■□□ 2.63
SPNS3-203ENST00000575185 ATAD2Q6PL18 1390 aa31.44■■■□□ 2.62
SPNS3-203ENST00000575185 ATRNO75882 1429 aa31.43■■■□□ 2.62
SPNS3-203ENST00000575185 MYOM2P54296 1465 aa31.43■■■□□ 2.62
SPNS3-203ENST00000575185 TRPC5Q9UL62 973 aaPredicted RBP31.42■■■□□ 2.62
SPNS3-203ENST00000575185 PXDNQ92626 1479 aa31.41■■■□□ 2.62
SPNS3-203ENST00000575185 FNBP4Q8N3X1 1017 aaPredicted RBP31.41■■■□□ 2.62
SPNS3-203ENST00000575185 RPGRIP1LQ68CZ1 1315 aa31.38■■■□□ 2.61
SPNS3-203ENST00000575185 ESCO1Q5FWF5 840 aa31.36■■■□□ 2.61
SPNS3-203ENST00000575185 XPCQ01831 940 aaPredicted RBP31.35■■■□□ 2.61
SPNS3-203ENST00000575185 BCL9LQ86UU0 1499 aa31.34■■■□□ 2.61
SPNS3-203ENST00000575185 NPHP3Q7Z494 1330 aa31.34■■■□□ 2.61
SPNS3-203ENST00000575185 IFT172Q9UG01 1749 aa31.33■■■□□ 2.61
SPNS3-203ENST00000575185 SLC4A1APQ9BWU0 796 aaKnown RBP31.33■■■□□ 2.61
SPNS3-203ENST00000575185 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.3■■■□□ 2.6
SPNS3-203ENST00000575185 FOXO3O43524 673 aa31.3■■■□□ 2.6
SPNS3-203ENST00000575185 FOXD1Q16676 465 aa31.3■■■□□ 2.6
SPNS3-203ENST00000575185 KNDC1Q76NI1 1749 aa31.29■■■□□ 2.6
SPNS3-203ENST00000575185 ADGRF5Q8IZF2 1346 aa31.29■■■□□ 2.6
SPNS3-203ENST00000575185 NUTM2FA1L443 756 aa31.29■■■□□ 2.6
SPNS3-203ENST00000575185 FMN2Q9NZ56 1722 aa31.28■■■□□ 2.6
SPNS3-203ENST00000575185 TECPR2O15040 1411 aa31.26■■■□□ 2.6
SPNS3-203ENST00000575185 WAPLQ7Z5K2 1190 aa31.26■■■□□ 2.59
SPNS3-203ENST00000575185 STK26Q9P289 416 aa31.26■■■□□ 2.59
SPNS3-203ENST00000575185 PLEKHH1Q9ULM0 1364 aa31.25■■■□□ 2.59
SPNS3-203ENST00000575185 GLI3P10071 1580 aa31.24■■■□□ 2.59
SPNS3-203ENST00000575185 KIF1AQ12756 1690 aa31.22■■■□□ 2.59
SPNS3-203ENST00000575185 BRWD3Q6RI45 1802 aa31.21■■■□□ 2.59
SPNS3-203ENST00000575185 RGPD8O14715 1765 aaPredicted RBP31.21■■■□□ 2.59
SPNS3-203ENST00000575185 GJD4Q96KN9 370 aaPredicted RBP31.21■■■□□ 2.59
SPNS3-203ENST00000575185 SPATA31E1Q6ZUB1 1445 aa31.21■■■□□ 2.59
SPNS3-203ENST00000575185 LRPPRCP42704 1394 aaKnown RBP31.2■■■□□ 2.59
SPNS3-203ENST00000575185 USP32Q8NFA0 1604 aa31.2■■■□□ 2.58
SPNS3-203ENST00000575185 CCDC144AA2RUR9 1427 aa31.19■■■□□ 2.58
SPNS3-203ENST00000575185 RGL3Q3MIN7 710 aa31.19■■■□□ 2.58
SPNS3-203ENST00000575185 ZRANB1Q9UGI0 708 aa31.19■■■□□ 2.58
SPNS3-203ENST00000575185 TMEM132EQ6IEE7 984 aa31.18■■■□□ 2.58
SPNS3-203ENST00000575185 RALGAPBQ86X10 1494 aa31.18■■■□□ 2.58
SPNS3-203ENST00000575185 SLIT2O94813 1529 aa31.18■■■□□ 2.58
SPNS3-203ENST00000575185 PIK3C2GO75747 1445 aa31.15■■■□□ 2.58
SPNS3-203ENST00000575185 ABCC11Q96J66 1382 aa31.15■■■□□ 2.58
SPNS3-203ENST00000575185 SPATA31A3Q5VYP0 1347 aa31.14■■■□□ 2.58
SPNS3-203ENST00000575185 ABCA3Q99758 1704 aa31.13■■■□□ 2.57
SPNS3-203ENST00000575185 ANKRD30BQ9BXX2 1392 aa31.13■■■□□ 2.57
SPNS3-203ENST00000575185 PLCH1Q4KWH8 1693 aa31.13■■■□□ 2.57
SPNS3-203ENST00000575185 UNC5CLQ8IV45 518 aa31.12■■■□□ 2.57
SPNS3-203ENST00000575185 YTHDC2Q9H6S0 1430 aaKnown RBP31.12■■■□□ 2.57
SPNS3-203ENST00000575185 CCDC125Q86Z20 511 aa31.11■■■□□ 2.57
SPNS3-203ENST00000575185 KRT28Q7Z3Y7 464 aa31.07■■■□□ 2.56
SPNS3-203ENST00000575185 BLMP54132 1417 aaPredicted RBP31.07■■■□□ 2.56
SPNS3-203ENST00000575185 TNS3Q68CZ2 1445 aa31.06■■■□□ 2.56
SPNS3-203ENST00000575185 NWD2Q9ULI1 1742 aa31.05■■■□□ 2.56
SPNS3-203ENST00000575185 PLEKHG5O94827 1062 aa31.04■■■□□ 2.56
SPNS3-203ENST00000575185 CABLES1Q8TDN4 633 aa31.03■■■□□ 2.56
SPNS3-203ENST00000575185 MPHOSPH9Q99550 1183 aa31.02■■■□□ 2.56
SPNS3-203ENST00000575185 DEFB132Q7Z7B7 95 aa31.01■■■□□ 2.55
SPNS3-203ENST00000575185 HAP1P54257 671 aaPredicted RBP30.99■■■□□ 2.55
SPNS3-203ENST00000575185 PHF8Q9UPP1 1060 aa30.99■■■□□ 2.55
SPNS3-203ENST00000575185 NRXN1Q9ULB1 1477 aa30.99■■■□□ 2.55
SPNS3-203ENST00000575185 SEPT12Q8IYM1 358 aa30.98■■■□□ 2.55
SPNS3-203ENST00000575185 NRAPQ86VF7 1730 aa30.95■■■□□ 2.55
SPNS3-203ENST00000575185 SAFB2Q14151 953 aaKnown RBP eCLIP30.95■■■□□ 2.55
SPNS3-203ENST00000575185 VPS72Q15906 364 aa30.95■■■□□ 2.55
SPNS3-203ENST00000575185 CFAP70Q5T0N1 1121 aa30.93■■■□□ 2.54
SPNS3-203ENST00000575185 LMOD2Q6P5Q4 547 aa30.93■■■□□ 2.54
SPNS3-203ENST00000575185 SIRT1Q96EB6 747 aa30.93■■■□□ 2.54
SPNS3-203ENST00000575185 C14orf93Q9H972 538 aaKnown RBP30.93■■■□□ 2.54
SPNS3-203ENST00000575185 TRPM3Q9HCF6 1732 aaPredicted RBP30.93■■■□□ 2.54
SPNS3-203ENST00000575185 SBNO1A3KN83 1393 aa30.92■■■□□ 2.54
SPNS3-203ENST00000575185 PSME1Q06323 249 aa30.92■■■□□ 2.54
SPNS3-203ENST00000575185 CCDC9Q9Y3X0 531 aaKnown RBP30.92■■■□□ 2.54
SPNS3-203ENST00000575185 PRAM1Q96QH2 718 aa30.91■■■□□ 2.54
SPNS3-203ENST00000575185 DHX57Q6P158 1386 aaKnown RBP30.9■■■□□ 2.54
SPNS3-203ENST00000575185 ARHGEF10O15013 1369 aa30.89■■■□□ 2.54
SPNS3-203ENST00000575185 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
SPNS3-203ENST00000575185 LRP5O75197 1615 aa30.88■■■□□ 2.53
SPNS3-203ENST00000575185 SF3B2Q13435 895 aaKnown RBP30.88■■■□□ 2.53
SPNS3-203ENST00000575185 ALS2Q96Q42 1657 aa30.87■■■□□ 2.53
SPNS3-203ENST00000575185 PMFBP1Q8TBY8 1022 aa30.87■■■□□ 2.53
SPNS3-203ENST00000575185 ONECUT3O60422 494 aaPredicted RBP30.86■■■□□ 2.53
SPNS3-203ENST00000575185 KRT27Q7Z3Y8 459 aa30.86■■■□□ 2.53
SPNS3-203ENST00000575185 DLC1Q96QB1 1528 aa30.86■■■□□ 2.53
SPNS3-203ENST00000575185 FAM83GA6ND36 823 aa30.85■■■□□ 2.53
SPNS3-203ENST00000575185 ANKARQ7Z5J8 1434 aa30.84■■■□□ 2.53
SPNS3-203ENST00000575185 CRYBG1Q9Y4K1 1723 aa30.83■■■□□ 2.53
SPNS3-203ENST00000575185 COL14A1Q05707 1796 aaKnown RBP30.82■■■□□ 2.52
SPNS3-203ENST00000575185 ADGRB1O14514 1584 aa30.82■■■□□ 2.52
SPNS3-203ENST00000575185 A0A0G2JS52 829 aa30.81■■■□□ 2.52
SPNS3-203ENST00000575185 MYT1Q01538 1121 aa30.81■■■□□ 2.52
SPNS3-203ENST00000575185 FAM98CQ17RN3 349 aaKnown RBP30.79■■■□□ 2.52
SPNS3-203ENST00000575185 POGKQ9P215 609 aa30.79■■■□□ 2.52
SPNS3-203ENST00000575185 HIRIP3Q9BW71 556 aaPredicted RBP30.78■■■□□ 2.52
SPNS3-203ENST00000575185 RGPD1P0DJD0 1748 aa30.78■■■□□ 2.52
SPNS3-203ENST00000575185 PSDA5PKW4 1024 aaPredicted RBP30.77■■■□□ 2.52
SPNS3-203ENST00000575185 BTG4Q9NY30 223 aa30.77■■■□□ 2.52
SPNS3-203ENST00000575185 PRR36Q9H6K5 1346 aa30.74■■■□□ 2.51
SPNS3-203ENST00000575185 TULP4Q9NRJ4 1543 aa30.74■■■□□ 2.51
SPNS3-203ENST00000575185 TNS1Q9HBL0 1735 aaKnown RBP30.73■■■□□ 2.51
SPNS3-203ENST00000575185 THSD7AQ9UPZ6 1657 aa30.73■■■□□ 2.51
SPNS3-203ENST00000575185 MINK1Q8N4C8 1332 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms