RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
TRIM25-209ENST00000574997 NALCNQ8IZF0 1738 aa9.65□□□□□ -0.86
TRIM25-209ENST00000574997 ROBO2Q9HCK4 1378 aa9.65□□□□□ -0.86
TRIM25-209ENST00000574997 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
TRIM25-209ENST00000574997 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
TRIM25-209ENST00000574997 PPLO60437 1756 aa9.65□□□□□ -0.87
TRIM25-209ENST00000574997 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.87
TRIM25-209ENST00000574997 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
TRIM25-209ENST00000574997 ESCO1Q5FWF5 840 aa9.64□□□□□ -0.87
TRIM25-209ENST00000574997 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
TRIM25-209ENST00000574997 USP21Q9UK80 565 aa9.64□□□□□ -0.87
TRIM25-209ENST00000574997 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
TRIM25-209ENST00000574997 DDX17Q92841 729 aaKnown RBP9.63□□□□□ -0.87
TRIM25-209ENST00000574997 TECPR2O15040 1411 aa9.63□□□□□ -0.87
TRIM25-209ENST00000574997 CDC42BPGQ6DT37 1551 aa9.62□□□□□ -0.87
TRIM25-209ENST00000574997 ATAD2Q6PL18 1390 aa9.62□□□□□ -0.87
TRIM25-209ENST00000574997 COL22A1Q8NFW1 1626 aaPredicted RBP9.61□□□□□ -0.87
TRIM25-209ENST00000574997 PSME1Q06323 249 aa9.61□□□□□ -0.87
TRIM25-209ENST00000574997 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
TRIM25-209ENST00000574997 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
TRIM25-209ENST00000574997 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
TRIM25-209ENST00000574997 SPATA31E1Q6ZUB1 1445 aa9.6□□□□□ -0.87
TRIM25-209ENST00000574997 FOXO3O43524 673 aa9.6□□□□□ -0.87
TRIM25-209ENST00000574997 C14orf93Q9H972 538 aaKnown RBP9.6□□□□□ -0.87
TRIM25-209ENST00000574997 DHX57Q6P158 1386 aaKnown RBP9.6□□□□□ -0.87
TRIM25-209ENST00000574997 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
TRIM25-209ENST00000574997 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
TRIM25-209ENST00000574997 STK26Q9P289 416 aa9.58□□□□□ -0.88
TRIM25-209ENST00000574997 MYOM2P54296 1465 aa9.58□□□□□ -0.88
TRIM25-209ENST00000574997 PXDNQ92626 1479 aa9.58□□□□□ -0.88
TRIM25-209ENST00000574997 PIK3C2GO75747 1445 aa9.57□□□□□ -0.88
TRIM25-209ENST00000574997 ATRNO75882 1429 aa9.57□□□□□ -0.88
TRIM25-209ENST00000574997 KNDC1Q76NI1 1749 aa9.57□□□□□ -0.88
TRIM25-209ENST00000574997 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
TRIM25-209ENST00000574997 KIF1AQ12756 1690 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 TMEM132EQ6IEE7 984 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 KRT28Q7Z3Y7 464 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 UNC5CLQ8IV45 518 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 IFT172Q9UG01 1749 aa9.56□□□□□ -0.88
TRIM25-209ENST00000574997 MARF1Q9Y4F3 1742 aaKnown RBP9.56□□□□□ -0.88
TRIM25-209ENST00000574997 HRCP23327 699 aa9.55□□□□□ -0.88
TRIM25-209ENST00000574997 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
TRIM25-209ENST00000574997 SBNO1A3KN83 1393 aa9.54□□□□□ -0.88
TRIM25-209ENST00000574997 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
TRIM25-209ENST00000574997 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
TRIM25-209ENST00000574997 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
TRIM25-209ENST00000574997 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
TRIM25-209ENST00000574997 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
TRIM25-209ENST00000574997 POGKQ9P215 609 aa9.53□□□□□ -0.88
TRIM25-209ENST00000574997 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
TRIM25-209ENST00000574997 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
TRIM25-209ENST00000574997 SLIT2O94813 1529 aa9.52□□□□□ -0.88
TRIM25-209ENST00000574997 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
TRIM25-209ENST00000574997 XPCQ01831 940 aaPredicted RBP9.52□□□□□ -0.89
TRIM25-209ENST00000574997 VPS72Q15906 364 aa9.52□□□□□ -0.89
TRIM25-209ENST00000574997 CFAP70Q5T0N1 1121 aa9.52□□□□□ -0.89
TRIM25-209ENST00000574997 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
TRIM25-209ENST00000574997 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
TRIM25-209ENST00000574997 PLEKHH1Q9ULM0 1364 aa9.51□□□□□ -0.89
TRIM25-209ENST00000574997 SF3B2Q13435 895 aaKnown RBP9.51□□□□□ -0.89
TRIM25-209ENST00000574997 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
TRIM25-209ENST00000574997 GLI3P10071 1580 aa9.5□□□□□ -0.89
TRIM25-209ENST00000574997 TNS3Q68CZ2 1445 aa9.5□□□□□ -0.89
TRIM25-209ENST00000574997 GPRASP1Q5JY77 1395 aa9.5□□□□□ -0.89
TRIM25-209ENST00000574997 BLMP54132 1417 aaPredicted RBP9.49□□□□□ -0.89
TRIM25-209ENST00000574997 NWD2Q9ULI1 1742 aa9.49□□□□□ -0.89
TRIM25-209ENST00000574997 LRP5O75197 1615 aa9.49□□□□□ -0.89
TRIM25-209ENST00000574997 RALGAPBQ86X10 1494 aa9.48□□□□□ -0.89
TRIM25-209ENST00000574997 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
TRIM25-209ENST00000574997 SEPT12Q8IYM1 358 aa9.48□□□□□ -0.89
TRIM25-209ENST00000574997 USP32Q8NFA0 1604 aa9.48□□□□□ -0.89
TRIM25-209ENST00000574997 FAM83GA6ND36 823 aa9.47□□□□□ -0.89
TRIM25-209ENST00000574997 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
TRIM25-209ENST00000574997 KRT27Q7Z3Y8 459 aa9.47□□□□□ -0.89
TRIM25-209ENST00000574997 DCAF11Q8TEB1 546 aa9.47□□□□□ -0.89
TRIM25-209ENST00000574997 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
TRIM25-209ENST00000574997 ADGRB2O60241 1585 aa9.46□□□□□ -0.89
TRIM25-209ENST00000574997 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
TRIM25-209ENST00000574997 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.9
TRIM25-209ENST00000574997 BRWD3Q6RI45 1802 aa9.46□□□□□ -0.9
TRIM25-209ENST00000574997 RAB3GAP2Q9H2M9 1393 aa9.46□□□□□ -0.9
TRIM25-209ENST00000574997 SAFB2Q14151 953 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM25-209ENST00000574997 DEFB132Q7Z7B7 95 aa9.45□□□□□ -0.9
TRIM25-209ENST00000574997 NGDNQ8NEJ9 315 aaKnown RBP9.45□□□□□ -0.9
TRIM25-209ENST00000574997 PMFBP1Q8TBY8 1022 aa9.45□□□□□ -0.9
TRIM25-209ENST00000574997 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
TRIM25-209ENST00000574997 BAG6P46379 1132 aa9.44□□□□□ -0.9
TRIM25-209ENST00000574997 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
TRIM25-209ENST00000574997 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
TRIM25-209ENST00000574997 ADGRB1O14514 1584 aa9.44□□□□□ -0.9
TRIM25-209ENST00000574997 PLCH1Q4KWH8 1693 aa9.44□□□□□ -0.9
TRIM25-209ENST00000574997 TULP4Q9NRJ4 1543 aa9.43□□□□□ -0.9
TRIM25-209ENST00000574997 ABCA3Q99758 1704 aa9.42□□□□□ -0.9
TRIM25-209ENST00000574997 MINK1Q8N4C8 1332 aaPredicted RBP9.42□□□□□ -0.9
TRIM25-209ENST00000574997 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
TRIM25-209ENST00000574997 COL14A1Q05707 1796 aaKnown RBP9.42□□□□□ -0.9
TRIM25-209ENST00000574997 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms