RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 WAPLQ7Z5K2 1190 aa18.21■□□□□ 0.51
TRAPPC1-206ENST00000573989 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
TRAPPC1-206ENST00000573989 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
TRAPPC1-206ENST00000573989 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
TRAPPC1-206ENST00000573989 ARHGEF28Q8N1W1 1705 aaKnown RBP18.19■□□□□ 0.5
TRAPPC1-206ENST00000573989 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
TRAPPC1-206ENST00000573989 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
TRAPPC1-206ENST00000573989 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
TRAPPC1-206ENST00000573989 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAPPC1-206ENST00000573989 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
TRAPPC1-206ENST00000573989 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
TRAPPC1-206ENST00000573989 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
TRAPPC1-206ENST00000573989 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
TRAPPC1-206ENST00000573989 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
TRAPPC1-206ENST00000573989 MST1RQ04912 1400 aa18.13■□□□□ 0.49
TRAPPC1-206ENST00000573989 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
TRAPPC1-206ENST00000573989 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC1-206ENST00000573989 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
TRAPPC1-206ENST00000573989 MINK1Q8N4C8 1332 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC1-206ENST00000573989 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
TRAPPC1-206ENST00000573989 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC1-206ENST00000573989 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.48
TRAPPC1-206ENST00000573989 BRINP3Q76B58 766 aa18.07■□□□□ 0.48
TRAPPC1-206ENST00000573989 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC1-206ENST00000573989 HSPA1LP34931 641 aa18.06■□□□□ 0.48
TRAPPC1-206ENST00000573989 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
TRAPPC1-206ENST00000573989 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
TRAPPC1-206ENST00000573989 ESCO1Q5FWF5 840 aa18.05■□□□□ 0.48
TRAPPC1-206ENST00000573989 ANKARQ7Z5J8 1434 aa18.04■□□□□ 0.48
TRAPPC1-206ENST00000573989 RGPD8O14715 1765 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC1-206ENST00000573989 AHDC1Q5TGY3 1603 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC1-206ENST00000573989 TULP4Q9NRJ4 1543 aa18.03■□□□□ 0.48
TRAPPC1-206ENST00000573989 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
TRAPPC1-206ENST00000573989 NHSL1Q5SYE7 1610 aa18.02■□□□□ 0.48
TRAPPC1-206ENST00000573989 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
TRAPPC1-206ENST00000573989 ITSN1Q15811 1721 aa18.02■□□□□ 0.48
TRAPPC1-206ENST00000573989 ORAI2Q96SN7 254 aa18.02■□□□□ 0.48
TRAPPC1-206ENST00000573989 CDK19Q9BWU1 502 aa18.01■□□□□ 0.47
TRAPPC1-206ENST00000573989 EVC2Q86UK5 1308 aa18■□□□□ 0.47
TRAPPC1-206ENST00000573989 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
TRAPPC1-206ENST00000573989 SRPK2P78362 688 aaKnown RBP17.99■□□□□ 0.47
TRAPPC1-206ENST00000573989 SBNO2Q9Y2G9 1366 aa17.99■□□□□ 0.47
TRAPPC1-206ENST00000573989 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
TRAPPC1-206ENST00000573989 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
TRAPPC1-206ENST00000573989 USP47Q96K76 1375 aa17.97■□□□□ 0.47
TRAPPC1-206ENST00000573989 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
TRAPPC1-206ENST00000573989 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC1-206ENST00000573989 LRRC59Q96AG4 307 aaKnown RBP17.96■□□□□ 0.47
TRAPPC1-206ENST00000573989 ST20-MTHFSA0A0A6YYL1 179 aa17.95■□□□□ 0.46
TRAPPC1-206ENST00000573989 FOXO3O43524 673 aa17.95■□□□□ 0.46
TRAPPC1-206ENST00000573989 CCDC61Q9Y6R9 512 aa17.95■□□□□ 0.46
TRAPPC1-206ENST00000573989 ATP7BP35670 1465 aa17.95■□□□□ 0.46
TRAPPC1-206ENST00000573989 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
TRAPPC1-206ENST00000573989 JCADQ9P266 1359 aa17.93■□□□□ 0.46
TRAPPC1-206ENST00000573989 PSME1Q06323 249 aa17.93■□□□□ 0.46
TRAPPC1-206ENST00000573989 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
TRAPPC1-206ENST00000573989 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC1-206ENST00000573989 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
TRAPPC1-206ENST00000573989 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
TRAPPC1-206ENST00000573989 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
TRAPPC1-206ENST00000573989 TOPAZ1Q8N9V7 1692 aa17.92■□□□□ 0.46
TRAPPC1-206ENST00000573989 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
TRAPPC1-206ENST00000573989 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
TRAPPC1-206ENST00000573989 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC1-206ENST00000573989 KRT28Q7Z3Y7 464 aa17.9■□□□□ 0.46
TRAPPC1-206ENST00000573989 TMF1P82094 1093 aa17.89■□□□□ 0.45
TRAPPC1-206ENST00000573989 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
TRAPPC1-206ENST00000573989 PXDNQ92626 1479 aa17.88■□□□□ 0.45
TRAPPC1-206ENST00000573989 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
TRAPPC1-206ENST00000573989 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
TRAPPC1-206ENST00000573989 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
TRAPPC1-206ENST00000573989 TESK2Q96S53 571 aa17.88■□□□□ 0.45
TRAPPC1-206ENST00000573989 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC1-206ENST00000573989 SPATA31A6Q5VVP1 1343 aa17.87■□□□□ 0.45
TRAPPC1-206ENST00000573989 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
TRAPPC1-206ENST00000573989 POLR3AO14802 1390 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC1-206ENST00000573989 ACEP12821 1306 aa17.85■□□□□ 0.45
TRAPPC1-206ENST00000573989 CABP1Q9NZU7 370 aa17.85■□□□□ 0.45
TRAPPC1-206ENST00000573989 PNPLA6Q8IY17 1366 aa17.83■□□□□ 0.45
TRAPPC1-206ENST00000573989 SPATA31A3Q5VYP0 1347 aa17.83■□□□□ 0.44
TRAPPC1-206ENST00000573989 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
TRAPPC1-206ENST00000573989 ARHGEF10O15013 1369 aa17.82■□□□□ 0.44
TRAPPC1-206ENST00000573989 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC1-206ENST00000573989 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
TRAPPC1-206ENST00000573989 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC1-206ENST00000573989 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 COL22A1Q8NFW1 1626 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 HSPA5P11021 654 aaKnown RBP17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 MED1Q15648 1581 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC1-206ENST00000573989 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
TRAPPC1-206ENST00000573989 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
TRAPPC1-206ENST00000573989 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
TRAPPC1-206ENST00000573989 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
TRAPPC1-206ENST00000573989 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC1-206ENST00000573989 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC1-206ENST00000573989 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC1-206ENST00000573989 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms