RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
NDE1-206ENST00000572967 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
NDE1-206ENST00000572967 STK26Q9P289 416 aa17.31■□□□□ 0.36
NDE1-206ENST00000572967 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
NDE1-206ENST00000572967 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
NDE1-206ENST00000572967 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
NDE1-206ENST00000572967 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
NDE1-206ENST00000572967 TMEM132EQ6IEE7 984 aa17.29■□□□□ 0.36
NDE1-206ENST00000572967 NUTM2AQ8IVF1 878 aaPredicted RBP17.29■□□□□ 0.36
NDE1-206ENST00000572967 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
NDE1-206ENST00000572967 COL22A1Q8NFW1 1626 aaPredicted RBP17.28■□□□□ 0.36
NDE1-206ENST00000572967 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
NDE1-206ENST00000572967 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
NDE1-206ENST00000572967 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
NDE1-206ENST00000572967 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
NDE1-206ENST00000572967 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
NDE1-206ENST00000572967 PXDNQ92626 1479 aa17.24■□□□□ 0.35
NDE1-206ENST00000572967 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
NDE1-206ENST00000572967 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
NDE1-206ENST00000572967 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
NDE1-206ENST00000572967 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
NDE1-206ENST00000572967 CFAP70Q5T0N1 1121 aa17.23■□□□□ 0.35
NDE1-206ENST00000572967 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
NDE1-206ENST00000572967 USP32Q8NFA0 1604 aa17.22■□□□□ 0.35
NDE1-206ENST00000572967 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
NDE1-206ENST00000572967 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.35
NDE1-206ENST00000572967 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
NDE1-206ENST00000572967 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.34
NDE1-206ENST00000572967 ABCA3Q99758 1704 aa17.2■□□□□ 0.34
NDE1-206ENST00000572967 AFF2P51816 1311 aa17.2■□□□□ 0.34
NDE1-206ENST00000572967 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
NDE1-206ENST00000572967 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
NDE1-206ENST00000572967 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
NDE1-206ENST00000572967 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
NDE1-206ENST00000572967 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
NDE1-206ENST00000572967 C8orf37Q96NL8 207 aa17.18■□□□□ 0.34
NDE1-206ENST00000572967 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
NDE1-206ENST00000572967 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
NDE1-206ENST00000572967 ADAMTS2O95450 1211 aa17.16■□□□□ 0.34
NDE1-206ENST00000572967 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
NDE1-206ENST00000572967 PRAM1Q96QH2 718 aa17.16■□□□□ 0.34
NDE1-206ENST00000572967 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
NDE1-206ENST00000572967 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
NDE1-206ENST00000572967 FOXO3O43524 673 aa17.14■□□□□ 0.33
NDE1-206ENST00000572967 RGS12O14924 1447 aa17.13■□□□□ 0.33
NDE1-206ENST00000572967 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
NDE1-206ENST00000572967 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
NDE1-206ENST00000572967 TULP4Q9NRJ4 1543 aa17.12■□□□□ 0.33
NDE1-206ENST00000572967 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
NDE1-206ENST00000572967 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.12■□□□□ 0.33
NDE1-206ENST00000572967 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
NDE1-206ENST00000572967 POGKQ9P215 609 aa17.11■□□□□ 0.33
NDE1-206ENST00000572967 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
NDE1-206ENST00000572967 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
NDE1-206ENST00000572967 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
NDE1-206ENST00000572967 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
NDE1-206ENST00000572967 RXRBP28702 533 aa17.09■□□□□ 0.33
NDE1-206ENST00000572967 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
NDE1-206ENST00000572967 TOPAZ1Q8N9V7 1692 aa17.09■□□□□ 0.33
NDE1-206ENST00000572967 ALS2Q96Q42 1657 aa17.08■□□□□ 0.32
NDE1-206ENST00000572967 NGLY1Q96IV0 654 aa17.08■□□□□ 0.32
NDE1-206ENST00000572967 PHF8Q9UPP1 1060 aa17.07■□□□□ 0.32
NDE1-206ENST00000572967 QRICH2Q9H0J4 1663 aa17.07■□□□□ 0.32
NDE1-206ENST00000572967 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
NDE1-206ENST00000572967 ATP7BP35670 1465 aa17.05■□□□□ 0.32
NDE1-206ENST00000572967 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
NDE1-206ENST00000572967 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
NDE1-206ENST00000572967 ATRNO75882 1429 aa17.04■□□□□ 0.32
NDE1-206ENST00000572967 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
NDE1-206ENST00000572967 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
NDE1-206ENST00000572967 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
NDE1-206ENST00000572967 USP21Q9UK80 565 aa17.04■□□□□ 0.32
NDE1-206ENST00000572967 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
NDE1-206ENST00000572967 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
NDE1-206ENST00000572967 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
NDE1-206ENST00000572967 NWD2Q9ULI1 1742 aa17.03■□□□□ 0.32
NDE1-206ENST00000572967 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
NDE1-206ENST00000572967 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
NDE1-206ENST00000572967 BCL9LQ86UU0 1499 aa17.01■□□□□ 0.31
NDE1-206ENST00000572967 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
NDE1-206ENST00000572967 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
NDE1-206ENST00000572967 GLI3P10071 1580 aa17.01■□□□□ 0.31
NDE1-206ENST00000572967 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
NDE1-206ENST00000572967 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
NDE1-206ENST00000572967 SLIT2O94813 1529 aa17■□□□□ 0.31
NDE1-206ENST00000572967 ARHGEF10O15013 1369 aa17■□□□□ 0.31
NDE1-206ENST00000572967 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
NDE1-206ENST00000572967 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
NDE1-206ENST00000572967 TRPC5Q9UL62 973 aaPredicted RBP16.99■□□□□ 0.31
NDE1-206ENST00000572967 WASLO00401 505 aaPredicted RBP16.98■□□□□ 0.31
NDE1-206ENST00000572967 PSME1Q06323 249 aa16.98■□□□□ 0.31
NDE1-206ENST00000572967 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
NDE1-206ENST00000572967 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.314e-8■■■■■ 43.1
NDE1-206ENST00000572967 TIMELESSQ9UNS1 1208 aa16.97■□□□□ 0.31
NDE1-206ENST00000572967 BRWD3Q6RI45 1802 aa16.97■□□□□ 0.31
NDE1-206ENST00000572967 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
NDE1-206ENST00000572967 GPRASP1Q5JY77 1395 aa16.96■□□□□ 0.31
NDE1-206ENST00000572967 COL14A1Q05707 1796 aaKnown RBP16.96■□□□□ 0.31
NDE1-206ENST00000572967 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
NDE1-206ENST00000572967 TONSLQ96HA7 1378 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms