RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 GLI3P10071 1580 aa15.7■□□□□ 0.1
CHMP6-203ENST00000572525 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
CHMP6-203ENST00000572525 PXDNQ92626 1479 aa15.7■□□□□ 0.1
CHMP6-203ENST00000572525 HFM1A2PYH4 1435 aa15.69■□□□□ 0.1
CHMP6-203ENST00000572525 NWD2Q9ULI1 1742 aa15.69■□□□□ 0.1
CHMP6-203ENST00000572525 NUP155O75694 1391 aa15.69■□□□□ 0.1
CHMP6-203ENST00000572525 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
CHMP6-203ENST00000572525 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
CHMP6-203ENST00000572525 GJD4Q96KN9 370 aaPredicted RBP15.68■□□□□ 0.1
CHMP6-203ENST00000572525 SLIT2O94813 1529 aa15.67■□□□□ 0.1
CHMP6-203ENST00000572525 ORAI2Q96SN7 254 aa15.66■□□□□ 0.1
CHMP6-203ENST00000572525 PPLO60437 1756 aa15.66■□□□□ 0.1
CHMP6-203ENST00000572525 USP32Q8NFA0 1604 aa15.65■□□□□ 0.1
CHMP6-203ENST00000572525 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
CHMP6-203ENST00000572525 KIF1AQ12756 1690 aa15.65■□□□□ 0.1
CHMP6-203ENST00000572525 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
CHMP6-203ENST00000572525 RALGAPBQ86X10 1494 aa15.65■□□□□ 0.1
CHMP6-203ENST00000572525 LOC105371045A0A1W2PR82 267 aa15.64■□□□□ 0.09
CHMP6-203ENST00000572525 PLCH1Q4KWH8 1693 aa15.63■□□□□ 0.09
CHMP6-203ENST00000572525 LRPPRCP42704 1394 aaKnown RBP15.62■□□□□ 0.09
CHMP6-203ENST00000572525 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
CHMP6-203ENST00000572525 ABCA3Q99758 1704 aa15.6■□□□□ 0.09
CHMP6-203ENST00000572525 FMN2Q9NZ56 1722 aa15.6■□□□□ 0.09
CHMP6-203ENST00000572525 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
CHMP6-203ENST00000572525 UNC5CLQ8IV45 518 aa15.6■□□□□ 0.09
CHMP6-203ENST00000572525 RGPD1P0DJD0 1748 aa15.6■□□□□ 0.09
CHMP6-203ENST00000572525 SF3B2Q13435 895 aaKnown RBP15.58■□□□□ 0.08
CHMP6-203ENST00000572525 TECPR2O15040 1411 aa15.58■□□□□ 0.08
CHMP6-203ENST00000572525 ONECUT3O60422 494 aaPredicted RBP15.57■□□□□ 0.08
CHMP6-203ENST00000572525 RPGRIP1LQ68CZ1 1315 aa15.57■□□□□ 0.08
CHMP6-203ENST00000572525 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
CHMP6-203ENST00000572525 IFT172Q9UG01 1749 aa15.55■□□□□ 0.08
CHMP6-203ENST00000572525 ESCO1Q5FWF5 840 aa15.55■□□□□ 0.08
CHMP6-203ENST00000572525 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
CHMP6-203ENST00000572525 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
CHMP6-203ENST00000572525 NRAPQ86VF7 1730 aa15.54■□□□□ 0.08
CHMP6-203ENST00000572525 NAIPQ13075 1403 aa15.54■□□□□ 0.08
CHMP6-203ENST00000572525 SPATA31A3Q5VYP0 1347 aa15.54■□□□□ 0.08
CHMP6-203ENST00000572525 FOXO3O43524 673 aa15.53■□□□□ 0.08
CHMP6-203ENST00000572525 VPS72Q15906 364 aa15.53■□□□□ 0.08
CHMP6-203ENST00000572525 TNS1Q9HBL0 1735 aaKnown RBP15.52■□□□□ 0.08
CHMP6-203ENST00000572525 SEPT12Q8IYM1 358 aa15.52■□□□□ 0.08
CHMP6-203ENST00000572525 DISP2A7MBM2 1401 aa15.51■□□□□ 0.07
CHMP6-203ENST00000572525 HRCP23327 699 aa15.51■□□□□ 0.07
CHMP6-203ENST00000572525 BAG6P46379 1132 aa15.51■□□□□ 0.07
CHMP6-203ENST00000572525 TNS3Q68CZ2 1445 aa15.51■□□□□ 0.07
CHMP6-203ENST00000572525 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
CHMP6-203ENST00000572525 ABCC11Q96J66 1382 aa15.48■□□□□ 0.07
CHMP6-203ENST00000572525 ADGRB2O60241 1585 aa15.47■□□□□ 0.07
CHMP6-203ENST00000572525 SBNO1A3KN83 1393 aa15.47■□□□□ 0.07
CHMP6-203ENST00000572525 COL14A1Q05707 1796 aaKnown RBP15.47■□□□□ 0.07
CHMP6-203ENST00000572525 XPCQ01831 940 aaPredicted RBP15.46■□□□□ 0.07
CHMP6-203ENST00000572525 THSD7AQ9UPZ6 1657 aa15.46■□□□□ 0.07
CHMP6-203ENST00000572525 ARHGEF10O15013 1369 aa15.45■□□□□ 0.06
CHMP6-203ENST00000572525 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
CHMP6-203ENST00000572525 RRBP1Q9P2E9 1410 aaKnown RBP15.44■□□□□ 0.06
CHMP6-203ENST00000572525 TRPM3Q9HCF6 1732 aaPredicted RBP15.44■□□□□ 0.06
CHMP6-203ENST00000572525 RREB1Q92766 1687 aa15.44■□□□□ 0.06
CHMP6-203ENST00000572525 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
CHMP6-203ENST00000572525 CRYBG1Q9Y4K1 1723 aa15.43■□□□□ 0.06
CHMP6-203ENST00000572525 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
CHMP6-203ENST00000572525 PSDA5PKW4 1024 aaPredicted RBP15.42■□□□□ 0.06
CHMP6-203ENST00000572525 PSME1Q06323 249 aa15.42■□□□□ 0.06
CHMP6-203ENST00000572525 SIRT1Q96EB6 747 aa15.42■□□□□ 0.06
CHMP6-203ENST00000572525 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
CHMP6-203ENST00000572525 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
CHMP6-203ENST00000572525 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
CHMP6-203ENST00000572525 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
CHMP6-203ENST00000572525 NUP188Q5SRE5 1749 aa15.38■□□□□ 0.05
CHMP6-203ENST00000572525 YTHDC2Q9H6S0 1430 aaKnown RBP15.38■□□□□ 0.05
CHMP6-203ENST00000572525 WAPLQ7Z5K2 1190 aa15.38■□□□□ 0.05
CHMP6-203ENST00000572525 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
CHMP6-203ENST00000572525 CCDC9Q9Y3X0 531 aaKnown RBP15.38■□□□□ 0.05
CHMP6-203ENST00000572525 SPATA31E1Q6ZUB1 1445 aa15.37■□□□□ 0.05
CHMP6-203ENST00000572525 ANKARQ7Z5J8 1434 aa15.37■□□□□ 0.05
CHMP6-203ENST00000572525 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
CHMP6-203ENST00000572525 NUTM2FA1L443 756 aa15.36■□□□□ 0.05
CHMP6-203ENST00000572525 EN1Q05925 392 aaPredicted RBP15.36■□□□□ 0.05
CHMP6-203ENST00000572525 ADGRF5Q8IZF2 1346 aa15.36■□□□□ 0.05
CHMP6-203ENST00000572525 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
CHMP6-203ENST00000572525 ITGAEP38570 1179 aa15.35■□□□□ 0.05
CHMP6-203ENST00000572525 R3HDM1Q15032 1099 aaKnown RBP15.35■□□□□ 0.05
CHMP6-203ENST00000572525 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
CHMP6-203ENST00000572525 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
CHMP6-203ENST00000572525 FAM98CQ17RN3 349 aaKnown RBP15.34■□□□□ 0.05
CHMP6-203ENST00000572525 CABLES1Q8TDN4 633 aa15.34■□□□□ 0.05
CHMP6-203ENST00000572525 SPATA31A5Q5VU36 1347 aa15.34■□□□□ 0.05
CHMP6-203ENST00000572525 SPATA31A7Q8IWB4 1347 aa15.34■□□□□ 0.05
CHMP6-203ENST00000572525 DLC1Q96QB1 1528 aa15.33■□□□□ 0.05
CHMP6-203ENST00000572525 YY1P25490 414 aa15.33■□□□□ 0.04
CHMP6-203ENST00000572525 STK26Q9P289 416 aa15.33■□□□□ 0.04
CHMP6-203ENST00000572525 A0A0G2JS52 829 aa15.32■□□□□ 0.04
CHMP6-203ENST00000572525 MYT1Q01538 1121 aa15.32■□□□□ 0.04
CHMP6-203ENST00000572525 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
CHMP6-203ENST00000572525 BTG4Q9NY30 223 aa15.31■□□□□ 0.04
CHMP6-203ENST00000572525 ITSN1Q15811 1721 aa15.31■□□□□ 0.04
CHMP6-203ENST00000572525 CHD4Q14839 1912 aa15.3■□□□□ 0.04
CHMP6-203ENST00000572525 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
CHMP6-203ENST00000572525 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
CHMP6-203ENST00000572525 PHRF1Q9P1Y6 1649 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms