RNA–Protein interactions for RNA: ENST00000572102.5

TVP23A-204, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 5

Gene TVP23A, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-204ENST00000572102 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
TVP23A-204ENST00000572102 PARD3Q8TEW0 1356 aa13.03□□□□□ -0.32
TVP23A-204ENST00000572102 ZMYM4Q5VZL5 1548 aa13.02□□□□□ -0.32
TVP23A-204ENST00000572102 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.32
TVP23A-204ENST00000572102 PTPRTO14522 1441 aa13.02□□□□□ -0.32
TVP23A-204ENST00000572102 YEATS2Q9ULM3 1422 aa13.02□□□□□ -0.32
TVP23A-204ENST00000572102 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
TVP23A-204ENST00000572102 PLIN1O60240 522 aa13.01□□□□□ -0.33
TVP23A-204ENST00000572102 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
TVP23A-204ENST00000572102 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
TVP23A-204ENST00000572102 TRPM2O94759 1503 aa13.01□□□□□ -0.33
TVP23A-204ENST00000572102 NOS1P29475 1434 aa13□□□□□ -0.33
TVP23A-204ENST00000572102 STK26Q9P289 416 aa13□□□□□ -0.33
TVP23A-204ENST00000572102 MLECQ14165 292 aa12.99□□□□□ -0.33
TVP23A-204ENST00000572102 SPHKAPQ2M3C7 1700 aa12.99□□□□□ -0.33
TVP23A-204ENST00000572102 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
TVP23A-204ENST00000572102 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
TVP23A-204ENST00000572102 MROH1Q8NDA8 1641 aa12.98□□□□□ -0.33
TVP23A-204ENST00000572102 SCAF11Q99590 1463 aaKnown RBP12.98□□□□□ -0.33
TVP23A-204ENST00000572102 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
TVP23A-204ENST00000572102 NPATQ14207 1427 aa12.98□□□□□ -0.33
TVP23A-204ENST00000572102 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
TVP23A-204ENST00000572102 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
TVP23A-204ENST00000572102 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
TVP23A-204ENST00000572102 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
TVP23A-204ENST00000572102 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
TVP23A-204ENST00000572102 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
TVP23A-204ENST00000572102 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
TVP23A-204ENST00000572102 RNF17Q9BXT8 1623 aaKnown RBP12.97□□□□□ -0.33
TVP23A-204ENST00000572102 TET3O43151 1660 aa12.96□□□□□ -0.33
TVP23A-204ENST00000572102 INSRP06213 1382 aa12.96□□□□□ -0.33
TVP23A-204ENST00000572102 CEP152O94986 1710 aa12.96□□□□□ -0.34
TVP23A-204ENST00000572102 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.34
TVP23A-204ENST00000572102 IDI1Q13907 227 aa12.95□□□□□ -0.34
TVP23A-204ENST00000572102 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
TVP23A-204ENST00000572102 TEX2Q8IWB9 1127 aa12.95□□□□□ -0.34
TVP23A-204ENST00000572102 RCAN3Q9UKA8 241 aa12.95□□□□□ -0.34
TVP23A-204ENST00000572102 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
TVP23A-204ENST00000572102 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
TVP23A-204ENST00000572102 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
TVP23A-204ENST00000572102 CDCA8Q53HL2 280 aa12.93□□□□□ -0.34
TVP23A-204ENST00000572102 PIAS4Q8N2W9 510 aaPredicted RBP12.93□□□□□ -0.34
TVP23A-204ENST00000572102 PSMD1Q99460 953 aa12.93□□□□□ -0.34
TVP23A-204ENST00000572102 NEURL4Q96JN8 1562 aa12.93□□□□□ -0.34
TVP23A-204ENST00000572102 IPO4Q8TEX9 1081 aaKnown RBP12.93□□□□□ -0.34
TVP23A-204ENST00000572102 SKAP1Q86WV1 359 aa12.93□□□□□ -0.34
TVP23A-204ENST00000572102 EFCAB6Q5THR3 1501 aa12.92□□□□□ -0.34
TVP23A-204ENST00000572102 CENPJQ9HC77 1338 aaPredicted RBP12.92□□□□□ -0.34
TVP23A-204ENST00000572102 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
TVP23A-204ENST00000572102 FANCIQ9NVI1 1328 aa12.92□□□□□ -0.34
TVP23A-204ENST00000572102 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
TVP23A-204ENST00000572102 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
TVP23A-204ENST00000572102 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
TVP23A-204ENST00000572102 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
TVP23A-204ENST00000572102 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
TVP23A-204ENST00000572102 APAF1O14727 1248 aa12.9□□□□□ -0.35
TVP23A-204ENST00000572102 CHRM1P11229 460 aaPredicted RBP12.9□□□□□ -0.35
TVP23A-204ENST00000572102 IQGAP1P46940 1657 aa12.9□□□□□ -0.35
TVP23A-204ENST00000572102 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.35
TVP23A-204ENST00000572102 REREQ9P2R6 1566 aa12.89□□□□□ -0.35
TVP23A-204ENST00000572102 ERVK-7P63135 1459 aa12.89□□□□□ -0.35
TVP23A-204ENST00000572102 C20orf194Q5TEA3 1177 aa12.89□□□□□ -0.35
TVP23A-204ENST00000572102 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
TVP23A-204ENST00000572102 CLSTN1O94985 981 aa12.88□□□□□ -0.35
TVP23A-204ENST00000572102 PLEKHH1Q9ULM0 1364 aa12.88□□□□□ -0.35
TVP23A-204ENST00000572102 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
TVP23A-204ENST00000572102 MSH5O43196 834 aa12.87□□□□□ -0.35
TVP23A-204ENST00000572102 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
TVP23A-204ENST00000572102 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
TVP23A-204ENST00000572102 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
TVP23A-204ENST00000572102 KIF1BO60333 1816 aa12.87□□□□□ -0.35
TVP23A-204ENST00000572102 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
TVP23A-204ENST00000572102 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
TVP23A-204ENST00000572102 BLMP54132 1417 aaPredicted RBP12.87□□□□□ -0.35
TVP23A-204ENST00000572102 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
TVP23A-204ENST00000572102 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
TVP23A-204ENST00000572102 GTF2E1P29083 439 aaPredicted RBP12.86□□□□□ -0.35
TVP23A-204ENST00000572102 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
TVP23A-204ENST00000572102 ABCC3O15438 1527 aa12.85□□□□□ -0.35
TVP23A-204ENST00000572102 MYOM2P54296 1465 aa12.85□□□□□ -0.35
TVP23A-204ENST00000572102 AGLP35573 1532 aa12.85□□□□□ -0.35
TVP23A-204ENST00000572102 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
TVP23A-204ENST00000572102 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
TVP23A-204ENST00000572102 ADRA2BP18089 450 aa12.84□□□□□ -0.35
TVP23A-204ENST00000572102 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
TVP23A-204ENST00000572102 SYNMO15061 1565 aa12.84□□□□□ -0.35
TVP23A-204ENST00000572102 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
TVP23A-204ENST00000572102 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
TVP23A-204ENST00000572102 CRBNQ96SW2 442 aa12.84□□□□□ -0.35
TVP23A-204ENST00000572102 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
TVP23A-204ENST00000572102 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
TVP23A-204ENST00000572102 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
TVP23A-204ENST00000572102 KDM4AO75164 1064 aa12.83□□□□□ -0.36
TVP23A-204ENST00000572102 PLCD4Q9BRC7 762 aa12.83□□□□□ -0.36
TVP23A-204ENST00000572102 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
TVP23A-204ENST00000572102 RAD21O60216 631 aa12.82□□□□□ -0.36
TVP23A-204ENST00000572102 PIK3C2GO75747 1445 aa12.82□□□□□ -0.36
TVP23A-204ENST00000572102 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
TVP23A-204ENST00000572102 FBLN1P23142 703 aa12.82□□□□□ -0.36
TVP23A-204ENST00000572102 PRAM1Q96QH2 718 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms