RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
RAB40B-205ENST00000571880 WAPLQ7Z5K2 1190 aa24.59■■□□□ 1.53
RAB40B-205ENST00000571880 LRPPRCP42704 1394 aaKnown RBP24.58■■□□□ 1.53
RAB40B-205ENST00000571880 NUTM2FA1L443 756 aa24.58■■□□□ 1.53
RAB40B-205ENST00000571880 TECPR2O15040 1411 aa24.58■■□□□ 1.53
RAB40B-205ENST00000571880 LRRC59Q96AG4 307 aaKnown RBP24.57■■□□□ 1.52
RAB40B-205ENST00000571880 MYOM2P54296 1465 aa24.57■■□□□ 1.52
RAB40B-205ENST00000571880 YTHDC2Q9H6S0 1430 aaKnown RBP24.56■■□□□ 1.52
RAB40B-205ENST00000571880 AFF2P51816 1311 aa24.56■■□□□ 1.52
RAB40B-205ENST00000571880 NRXN1Q9ULB1 1477 aa24.54■■□□□ 1.52
RAB40B-205ENST00000571880 C8orf37Q96NL8 207 aa24.54■■□□□ 1.52
RAB40B-205ENST00000571880 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
RAB40B-205ENST00000571880 ZNF772Q68DY9 489 aaPredicted RBP24.53■■□□□ 1.52
RAB40B-205ENST00000571880 COL22A1Q8NFW1 1626 aaPredicted RBP24.53■■□□□ 1.52
RAB40B-205ENST00000571880 MARF1Q9Y4F3 1742 aaKnown RBP24.52■■□□□ 1.52
RAB40B-205ENST00000571880 ADAMTS2O95450 1211 aa24.52■■□□□ 1.52
RAB40B-205ENST00000571880 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
RAB40B-205ENST00000571880 PXDNQ92626 1479 aa24.51■■□□□ 1.51
RAB40B-205ENST00000571880 KIF1AQ12756 1690 aa24.5■■□□□ 1.51
RAB40B-205ENST00000571880 CFAP70Q5T0N1 1121 aa24.5■■□□□ 1.51
RAB40B-205ENST00000571880 SOS2Q07890 1332 aaPredicted RBP24.5■■□□□ 1.51
RAB40B-205ENST00000571880 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
RAB40B-205ENST00000571880 SAFB2Q14151 953 aaKnown RBP eCLIP24.47■■□□□ 1.51
RAB40B-205ENST00000571880 C14orf93Q9H972 538 aaKnown RBP24.45■■□□□ 1.5
RAB40B-205ENST00000571880 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
RAB40B-205ENST00000571880 FOXO3O43524 673 aa24.44■■□□□ 1.5
RAB40B-205ENST00000571880 NPHP3Q7Z494 1330 aa24.43■■□□□ 1.5
RAB40B-205ENST00000571880 ADGRB1O14514 1584 aa24.43■■□□□ 1.5
RAB40B-205ENST00000571880 RXRBP28702 533 aa24.43■■□□□ 1.5
RAB40B-205ENST00000571880 RGS12O14924 1447 aa24.43■■□□□ 1.5
RAB40B-205ENST00000571880 USP32Q8NFA0 1604 aa24.43■■□□□ 1.5
RAB40B-205ENST00000571880 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
RAB40B-205ENST00000571880 NGLY1Q96IV0 654 aa24.41■■□□□ 1.5
RAB40B-205ENST00000571880 KDM2AQ9Y2K7 1162 aa24.41■■□□□ 1.5
RAB40B-205ENST00000571880 PRAM1Q96QH2 718 aa24.4■■□□□ 1.5
RAB40B-205ENST00000571880 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.5
RAB40B-205ENST00000571880 ABCA3Q99758 1704 aa24.39■■□□□ 1.5
RAB40B-205ENST00000571880 DLC1Q96QB1 1528 aa24.39■■□□□ 1.49
RAB40B-205ENST00000571880 CDK12Q9NYV4 1490 aaPredicted RBP24.38■■□□□ 1.49
RAB40B-205ENST00000571880 ADGRB2O60241 1585 aa24.37■■□□□ 1.49
RAB40B-205ENST00000571880 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
RAB40B-205ENST00000571880 DCAF11Q8TEB1 546 aa24.36■■□□□ 1.49
RAB40B-205ENST00000571880 QTRT2Q9H974 415 aaKnown RBP24.36■■□□□ 1.49
RAB40B-205ENST00000571880 POGKQ9P215 609 aa24.34■■□□□ 1.49
RAB40B-205ENST00000571880 TRAK1Q9UPV9 953 aa24.34■■□□□ 1.49
RAB40B-205ENST00000571880 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
RAB40B-205ENST00000571880 USP21Q9UK80 565 aa24.33■■□□□ 1.49
RAB40B-205ENST00000571880 PLCH1Q4KWH8 1693 aa24.31■■□□□ 1.48
RAB40B-205ENST00000571880 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.48
RAB40B-205ENST00000571880 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.31■■□□□ 1.48
RAB40B-205ENST00000571880 MINK1Q8N4C8 1332 aaPredicted RBP24.31■■□□□ 1.48
RAB40B-205ENST00000571880 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
RAB40B-205ENST00000571880 PHF8Q9UPP1 1060 aa24.3■■□□□ 1.48
RAB40B-205ENST00000571880 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
RAB40B-205ENST00000571880 SIRT1Q96EB6 747 aa24.29■■□□□ 1.48
RAB40B-205ENST00000571880 TNS3Q68CZ2 1445 aa24.28■■□□□ 1.48
RAB40B-205ENST00000571880 KRT28Q7Z3Y7 464 aa24.28■■□□□ 1.48
RAB40B-205ENST00000571880 SPATA31A3Q5VYP0 1347 aa24.28■■□□□ 1.48
RAB40B-205ENST00000571880 ATRNO75882 1429 aa24.27■■□□□ 1.48
RAB40B-205ENST00000571880 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
RAB40B-205ENST00000571880 PMFBP1Q8TBY8 1022 aa24.26■■□□□ 1.47
RAB40B-205ENST00000571880 TULP4Q9NRJ4 1543 aa24.25■■□□□ 1.47
RAB40B-205ENST00000571880 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
RAB40B-205ENST00000571880 LMOD2Q6P5Q4 547 aa24.24■■□□□ 1.47
RAB40B-205ENST00000571880 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
RAB40B-205ENST00000571880 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
RAB40B-205ENST00000571880 ANKARQ7Z5J8 1434 aa24.24■■□□□ 1.47
RAB40B-205ENST00000571880 ALS2Q96Q42 1657 aa24.24■■□□□ 1.47
RAB40B-205ENST00000571880 KIAA1210Q9ULL0 1709 aa24.24■■□□□ 1.47
RAB40B-205ENST00000571880 FNBP4Q8N3X1 1017 aaPredicted RBP24.23■■□□□ 1.47
RAB40B-205ENST00000571880 BRWD3Q6RI45 1802 aa24.22■■□□□ 1.47
RAB40B-205ENST00000571880 GLI3P10071 1580 aa24.22■■□□□ 1.47
RAB40B-205ENST00000571880 PRR36Q9H6K5 1346 aa24.22■■□□□ 1.47
RAB40B-205ENST00000571880 HRCP23327 699 aa24.21■■□□□ 1.47
RAB40B-205ENST00000571880 HAP1P54257 671 aaPredicted RBP24.21■■□□□ 1.47
RAB40B-205ENST00000571880 CRYBG1Q9Y4K1 1723 aa24.19■■□□□ 1.46
RAB40B-205ENST00000571880 NWD2Q9ULI1 1742 aa24.18■■□□□ 1.46
RAB40B-205ENST00000571880 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
RAB40B-205ENST00000571880 PSME1Q06323 249 aa24.18■■□□□ 1.46
RAB40B-205ENST00000571880 SLIT2O94813 1529 aa24.18■■□□□ 1.46
RAB40B-205ENST00000571880 SBNO1A3KN83 1393 aa24.16■■□□□ 1.46
RAB40B-205ENST00000571880 NRAPQ86VF7 1730 aa24.16■■□□□ 1.46
RAB40B-205ENST00000571880 ATP7BP35670 1465 aa24.16■■□□□ 1.46
RAB40B-205ENST00000571880 RALGAPBQ86X10 1494 aa24.15■■□□□ 1.46
RAB40B-205ENST00000571880 QRICH2Q9H0J4 1663 aa24.15■■□□□ 1.46
RAB40B-205ENST00000571880 WASLO00401 505 aaPredicted RBP24.14■■□□□ 1.45
RAB40B-205ENST00000571880 ARHGEF10O15013 1369 aa24.14■■□□□ 1.45
RAB40B-205ENST00000571880 EIF3AQ14152 1382 aaKnown RBP24.14■■□□□ 1.45
RAB40B-205ENST00000571880 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.45
RAB40B-205ENST00000571880 PHRF1Q9P1Y6 1649 aaKnown RBP24.11■■□□□ 1.45
RAB40B-205ENST00000571880 UNC5CLQ8IV45 518 aa24.1■■□□□ 1.45
RAB40B-205ENST00000571880 GJD4Q96KN9 370 aaPredicted RBP24.1■■□□□ 1.45
RAB40B-205ENST00000571880 GPRASP1Q5JY77 1395 aa24.1■■□□□ 1.45
RAB40B-205ENST00000571880 NBPF1Q3BBV0 1214 aa24.09■■□□□ 1.45
RAB40B-205ENST00000571880 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.45
RAB40B-205ENST00000571880 NGDNQ8NEJ9 315 aaKnown RBP24.08■■□□□ 1.45
RAB40B-205ENST00000571880 STAC3Q96MF2 364 aa24.08■■□□□ 1.45
RAB40B-205ENST00000571880 EP400Q96L91 3159 aa24.08■■□□□ 1.45
RAB40B-205ENST00000571880 TRPM1Q7Z4N2 1603 aa24.06■■□□□ 1.44
RAB40B-205ENST00000571880 PAK3O75914 559 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms