RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TONSLQ96HA7 1378 aa10.09□□□□□ -0.79
SMG6-209ENST00000571442 MST1RQ04912 1400 aa10.08□□□□□ -0.8
SMG6-209ENST00000571442 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
SMG6-209ENST00000571442 SAFB2Q14151 953 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMG6-209ENST00000571442 PRAM1Q96QH2 718 aa10.08□□□□□ -0.8
SMG6-209ENST00000571442 CCER1Q8TC90 406 aaPredicted RBP10.07□□□□□ -0.8
SMG6-209ENST00000571442 DCCP43146 1447 aa10.07□□□□□ -0.8
SMG6-209ENST00000571442 CDC42BPGQ6DT37 1551 aa10.06□□□□□ -0.8
SMG6-209ENST00000571442 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
SMG6-209ENST00000571442 PHF23Q9BUL5 403 aaPredicted RBP10.06□□□□□ -0.8
SMG6-209ENST00000571442 SLAIN2Q9P270 581 aa10.06□□□□□ -0.8
SMG6-209ENST00000571442 FMN2Q9NZ56 1722 aa10.06□□□□□ -0.8
SMG6-209ENST00000571442 RGPD8O14715 1765 aaPredicted RBP10.06□□□□□ -0.8
SMG6-209ENST00000571442 ADGRB2O60241 1585 aa10.05□□□□□ -0.8
SMG6-209ENST00000571442 CLSPNQ9HAW4 1339 aa10.05□□□□□ -0.8
SMG6-209ENST00000571442 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 USP32Q8NFA0 1604 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 GPRASP1Q5JY77 1395 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 ATF3P18847 181 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 BRINP3Q76B58 766 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 CADPS2Q86UW7 1296 aa10.04□□□□□ -0.8
SMG6-209ENST00000571442 DDX17Q92841 729 aaKnown RBP10.04□□□□□ -0.8
SMG6-209ENST00000571442 HIRIP3Q9BW71 556 aaPredicted RBP10.04□□□□□ -0.8
SMG6-209ENST00000571442 MINK1Q8N4C8 1332 aaPredicted RBP10.04□□□□□ -0.8
SMG6-209ENST00000571442 ROCK2O75116 1388 aaKnown RBP10.03□□□□□ -0.8
SMG6-209ENST00000571442 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
SMG6-209ENST00000571442 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.8
SMG6-209ENST00000571442 POGKQ9P215 609 aa10.02□□□□□ -0.81
SMG6-209ENST00000571442 COL16A1Q07092 1604 aaPredicted RBP10.02□□□□□ -0.81
SMG6-209ENST00000571442 NHSL1Q5SYE7 1610 aa10.02□□□□□ -0.81
SMG6-209ENST00000571442 PRR36Q9H6K5 1346 aa10.02□□□□□ -0.81
SMG6-209ENST00000571442 PHLPP1O60346 1717 aa10.02□□□□□ -0.81
SMG6-209ENST00000571442 AHDC1Q5TGY3 1603 aaPredicted RBP10.01□□□□□ -0.81
SMG6-209ENST00000571442 TULP4Q9NRJ4 1543 aa10□□□□□ -0.81
SMG6-209ENST00000571442 WASLO00401 505 aaPredicted RBP9.98□□□□□ -0.81
SMG6-209ENST00000571442 CARD11Q9BXL7 1154 aa9.98□□□□□ -0.81
SMG6-209ENST00000571442 CENPJQ9HC77 1338 aaPredicted RBP9.98□□□□□ -0.81
SMG6-209ENST00000571442 ATP7BP35670 1465 aa9.98□□□□□ -0.81
SMG6-209ENST00000571442 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
SMG6-209ENST00000571442 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
SMG6-209ENST00000571442 XPCQ01831 940 aaPredicted RBP9.96□□□□□ -0.82
SMG6-209ENST00000571442 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
SMG6-209ENST00000571442 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
SMG6-209ENST00000571442 ANKARQ7Z5J8 1434 aa9.96□□□□□ -0.82
SMG6-209ENST00000571442 PXDNQ92626 1479 aa9.96□□□□□ -0.82
SMG6-209ENST00000571442 FOXO3O43524 673 aa9.95□□□□□ -0.82
SMG6-209ENST00000571442 PMFBP1Q8TBY8 1022 aa9.95□□□□□ -0.82
SMG6-209ENST00000571442 CABP2Q9NPB3 220 aa9.95□□□□□ -0.82
SMG6-209ENST00000571442 KIF1AQ12756 1690 aa9.95□□□□□ -0.82
SMG6-209ENST00000571442 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
SMG6-209ENST00000571442 NUDT16Q96DE0 195 aaKnown RBP9.94□□□□□ -0.82
SMG6-209ENST00000571442 TESK2Q96S53 571 aa9.94□□□□□ -0.82
SMG6-209ENST00000571442 PHF8Q9UPP1 1060 aa9.94□□□□□ -0.82
SMG6-209ENST00000571442 TRPM3Q9HCF6 1732 aaPredicted RBP9.93□□□□□ -0.82
SMG6-209ENST00000571442 SHPRHQ149N8 1683 aa9.93□□□□□ -0.82
SMG6-209ENST00000571442 USP47Q96K76 1375 aa9.93□□□□□ -0.82
SMG6-209ENST00000571442 ST20-MTHFSA0A0A6YYL1 179 aa9.93□□□□□ -0.82
SMG6-209ENST00000571442 ITSN1Q15811 1721 aa9.93□□□□□ -0.82
SMG6-209ENST00000571442 LRP6O75581 1613 aa9.93□□□□□ -0.82
SMG6-209ENST00000571442 EIF3AQ14152 1382 aaKnown RBP9.92□□□□□ -0.82
SMG6-209ENST00000571442 PNPLA6Q8IY17 1366 aa9.91□□□□□ -0.82
SMG6-209ENST00000571442 JCADQ9P266 1359 aa9.91□□□□□ -0.82
SMG6-209ENST00000571442 SBNO2Q9Y2G9 1366 aa9.91□□□□□ -0.82
SMG6-209ENST00000571442 NPHP3Q7Z494 1330 aa9.9□□□□□ -0.82
SMG6-209ENST00000571442 SRPK2P78362 688 aaKnown RBP9.9□□□□□ -0.82
SMG6-209ENST00000571442 KRT28Q7Z3Y7 464 aa9.9□□□□□ -0.82
SMG6-209ENST00000571442 PPIP5K1Q6PFW1 1433 aa9.9□□□□□ -0.83
SMG6-209ENST00000571442 ALS2Q96Q42 1657 aa9.9□□□□□ -0.83
SMG6-209ENST00000571442 COL22A1Q8NFW1 1626 aaPredicted RBP9.89□□□□□ -0.83
SMG6-209ENST00000571442 EVC2Q86UK5 1308 aa9.89□□□□□ -0.83
SMG6-209ENST00000571442 CCDC61Q9Y6R9 512 aa9.89□□□□□ -0.83
SMG6-209ENST00000571442 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
SMG6-209ENST00000571442 ACEP12821 1306 aa9.88□□□□□ -0.83
SMG6-209ENST00000571442 SPATA31A3Q5VYP0 1347 aa9.88□□□□□ -0.83
SMG6-209ENST00000571442 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
SMG6-209ENST00000571442 LRRC59Q96AG4 307 aaKnown RBP9.88□□□□□ -0.83
SMG6-209ENST00000571442 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
SMG6-209ENST00000571442 RGS17Q9UGC6 210 aaPredicted RBP9.88□□□□□ -0.83
SMG6-209ENST00000571442 AKAP12Q02952 1782 aa9.88□□□□□ -0.83
SMG6-209ENST00000571442 ABCA3Q99758 1704 aa9.87□□□□□ -0.83
SMG6-209ENST00000571442 CD163L1Q9NR16 1453 aa9.87□□□□□ -0.83
SMG6-209ENST00000571442 HSPA5P11021 654 aaKnown RBP9.87□□□□□ -0.83
SMG6-209ENST00000571442 TNS3Q68CZ2 1445 aa9.87□□□□□ -0.83
SMG6-209ENST00000571442 CRYBG1Q9Y4K1 1723 aa9.87□□□□□ -0.83
SMG6-209ENST00000571442 SBNO1A3KN83 1393 aa9.87□□□□□ -0.83
SMG6-209ENST00000571442 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
SMG6-209ENST00000571442 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
SMG6-209ENST00000571442 PSME1Q06323 249 aa9.86□□□□□ -0.83
SMG6-209ENST00000571442 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
SMG6-209ENST00000571442 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
SMG6-209ENST00000571442 NRKQ7Z2Y5 1582 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 SSH2Q76I76 1423 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 PLEKHG5O94827 1062 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 MEX3CQ5U5Q3 659 aaKnown RBP9.85□□□□□ -0.83
SMG6-209ENST00000571442 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 SLC12A5Q9H2X9 1139 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 MYOM1P52179 1685 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms