RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 NUP160Q12769 1436 aa16.78■□□□□ 0.28
TRPV1-206ENST00000571088 VGFO15240 615 aaPredicted RBP16.78■□□□□ 0.28
TRPV1-206ENST00000571088 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
TRPV1-206ENST00000571088 ZRSR1Q15695 479 aaKnown RBP16.78■□□□□ 0.28
TRPV1-206ENST00000571088 ST18O60284 1047 aa16.77■□□□□ 0.28
TRPV1-206ENST00000571088 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.27
TRPV1-206ENST00000571088 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.27
TRPV1-206ENST00000571088 MTHFSP49914 203 aa16.76■□□□□ 0.27
TRPV1-206ENST00000571088 KDM5CP41229 1560 aa16.76■□□□□ 0.27
TRPV1-206ENST00000571088 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
TRPV1-206ENST00000571088 MCTP1Q6DN14 999 aa16.76■□□□□ 0.27
TRPV1-206ENST00000571088 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
TRPV1-206ENST00000571088 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
TRPV1-206ENST00000571088 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
TRPV1-206ENST00000571088 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
TRPV1-206ENST00000571088 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
TRPV1-206ENST00000571088 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
TRPV1-206ENST00000571088 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
TRPV1-206ENST00000571088 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
TRPV1-206ENST00000571088 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
TRPV1-206ENST00000571088 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 PODXL2Q9NZ53 605 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 INSRP06213 1382 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 MBD5Q9P267 1494 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
TRPV1-206ENST00000571088 KCNJ4P48050 445 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 CAVIN1Q6NZI2 390 aaKnown RBP16.72■□□□□ 0.27
TRPV1-206ENST00000571088 RNF214Q8ND24 703 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 CCDC173Q0VFZ6 552 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
TRPV1-206ENST00000571088 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
TRPV1-206ENST00000571088 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
TRPV1-206ENST00000571088 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
TRPV1-206ENST00000571088 PHF14O94880 888 aa16.7■□□□□ 0.26
TRPV1-206ENST00000571088 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
TRPV1-206ENST00000571088 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
TRPV1-206ENST00000571088 PANK2Q9BZ23 570 aa16.69■□□□□ 0.26
TRPV1-206ENST00000571088 DUOX2Q9NRD8 1548 aa16.69■□□□□ 0.26
TRPV1-206ENST00000571088 NUCB2P80303 420 aa16.69■□□□□ 0.26
TRPV1-206ENST00000571088 XRCC6P12956 609 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRPV1-206ENST00000571088 A2MP01023 1474 aa16.68■□□□□ 0.26
TRPV1-206ENST00000571088 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
TRPV1-206ENST00000571088 MTERF4Q7Z6M4 381 aaKnown RBP16.68■□□□□ 0.26
TRPV1-206ENST00000571088 RIPK4P57078 832 aa16.68■□□□□ 0.26
TRPV1-206ENST00000571088 ASXL1Q8IXJ9 1541 aa16.67■□□□□ 0.26
TRPV1-206ENST00000571088 GOLGA6L6A8MZA4 724 aa16.67■□□□□ 0.26
TRPV1-206ENST00000571088 DIAPH1O60610 1272 aaKnown RBP16.67■□□□□ 0.26
TRPV1-206ENST00000571088 NRDCO43847 1150 aa16.67■□□□□ 0.26
TRPV1-206ENST00000571088 PLEKHH1Q9ULM0 1364 aa16.66■□□□□ 0.26
TRPV1-206ENST00000571088 CLCN1P35523 988 aa16.66■□□□□ 0.26
TRPV1-206ENST00000571088 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
TRPV1-206ENST00000571088 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
TRPV1-206ENST00000571088 ZNF771Q7L3S4 317 aaPredicted RBP16.65■□□□□ 0.26
TRPV1-206ENST00000571088 TRIM6-TRIM34B2RNG4 842 aa16.65■□□□□ 0.26
TRPV1-206ENST00000571088 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
TRPV1-206ENST00000571088 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
TRPV1-206ENST00000571088 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
TRPV1-206ENST00000571088 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
TRPV1-206ENST00000571088 OS9Q13438 667 aaPredicted RBP16.64■□□□□ 0.26
TRPV1-206ENST00000571088 ZMYM4Q5VZL5 1548 aa16.64■□□□□ 0.25
TRPV1-206ENST00000571088 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
TRPV1-206ENST00000571088 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
TRPV1-206ENST00000571088 PIK3C2GO75747 1445 aa16.64■□□□□ 0.25
TRPV1-206ENST00000571088 RARSP54136 660 aaKnown RBP16.64■□□□□ 0.25
TRPV1-206ENST00000571088 FGD1P98174 961 aa16.64■□□□□ 0.25
TRPV1-206ENST00000571088 MVPQ14764 893 aaKnown RBP16.64■□□□□ 0.25
TRPV1-206ENST00000571088 GGNBP2Q9H3C7 697 aa16.64■□□□□ 0.25
TRPV1-206ENST00000571088 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
TRPV1-206ENST00000571088 BCORL1Q5H9F3 1711 aa16.63■□□□□ 0.25
TRPV1-206ENST00000571088 PDCL3Q9H2J4 239 aa16.63■□□□□ 0.25
TRPV1-206ENST00000571088 ABCC10Q5T3U5 1492 aa16.63■□□□□ 0.25
TRPV1-206ENST00000571088 EXOSC9Q06265 439 aaKnown RBP16.63■□□□□ 0.25
TRPV1-206ENST00000571088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRPV1-206ENST00000571088 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
TRPV1-206ENST00000571088 UQCRHP07919 91 aa16.62■□□□□ 0.25
TRPV1-206ENST00000571088 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
TRPV1-206ENST00000571088 MPNDQ8N594 471 aa16.62■□□□□ 0.25
TRPV1-206ENST00000571088 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
TRPV1-206ENST00000571088 ARHGEF5Q12774 1597 aa16.62■□□□□ 0.25
TRPV1-206ENST00000571088 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
TRPV1-206ENST00000571088 TNNT3P45378 269 aaPredicted RBP16.61■□□□□ 0.25
TRPV1-206ENST00000571088 PLCH2O75038 1416 aa16.61■□□□□ 0.25
TRPV1-206ENST00000571088 IGHDP01880 384 aa16.6■□□□□ 0.25
TRPV1-206ENST00000571088 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
TRPV1-206ENST00000571088 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
TRPV1-206ENST00000571088 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
TRPV1-206ENST00000571088 KDM2BQ8NHM5 1336 aa16.59■□□□□ 0.25
TRPV1-206ENST00000571088 SLC4A10Q6U841 1118 aa16.59■□□□□ 0.25
TRPV1-206ENST00000571088 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
TRPV1-206ENST00000571088 HMMRO75330 724 aa16.59■□□□□ 0.25
TRPV1-206ENST00000571088 REC8O95072 547 aa16.59■□□□□ 0.25
TRPV1-206ENST00000571088 HDGFP51858 240 aaKnown RBP16.58■□□□□ 0.25
TRPV1-206ENST00000571088 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.25
TRPV1-206ENST00000571088 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.25
TRPV1-206ENST00000571088 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
TRPV1-206ENST00000571088 ATF7IPQ6VMQ6 1270 aa16.57■□□□□ 0.24
TRPV1-206ENST00000571088 KDM5DQ9BY66 1539 aa16.56■□□□□ 0.24
TRPV1-206ENST00000571088 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
TRPV1-206ENST00000571088 SOX12O15370 315 aa16.56■□□□□ 0.24
TRPV1-206ENST00000571088 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms