RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 SHANK2Q9UPX8 1470 aa9.61□□□□□ -0.87
TOM1L1-208ENST00000570977 CEP170BQ9Y4F5 1589 aaPredicted RBP9.6□□□□□ -0.87
TOM1L1-208ENST00000570977 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
TOM1L1-208ENST00000570977 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
TOM1L1-208ENST00000570977 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
TOM1L1-208ENST00000570977 ZNF142P52746 1687 aaPredicted RBP9.59□□□□□ -0.87
TOM1L1-208ENST00000570977 MAP3K9P80192 1104 aa9.59□□□□□ -0.87
TOM1L1-208ENST00000570977 KIF14Q15058 1648 aa9.59□□□□□ -0.87
TOM1L1-208ENST00000570977 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
TOM1L1-208ENST00000570977 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
TOM1L1-208ENST00000570977 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
TOM1L1-208ENST00000570977 ABCC1P33527 1531 aa9.58□□□□□ -0.88
TOM1L1-208ENST00000570977 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
TOM1L1-208ENST00000570977 CLIP1P30622 1438 aa9.57□□□□□ -0.88
TOM1L1-208ENST00000570977 PCDH10Q9P2E7 1040 aa9.57□□□□□ -0.88
TOM1L1-208ENST00000570977 EEA1Q15075 1411 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 MYO3AQ8NEV4 1616 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 DPYSL4O14531 572 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 EVI5O60447 810 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 ANKLE2Q86XL3 938 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
TOM1L1-208ENST00000570977 GGT6Q6P531 493 aa9.55□□□□□ -0.88
TOM1L1-208ENST00000570977 POTEAQ6S8J7 498 aa9.55□□□□□ -0.88
TOM1L1-208ENST00000570977 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
TOM1L1-208ENST00000570977 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
TOM1L1-208ENST00000570977 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
TOM1L1-208ENST00000570977 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
TOM1L1-208ENST00000570977 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
TOM1L1-208ENST00000570977 E2F4Q16254 413 aa9.54□□□□□ -0.88
TOM1L1-208ENST00000570977 ZNF687Q8N1G0 1237 aa9.54□□□□□ -0.88
TOM1L1-208ENST00000570977 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
TOM1L1-208ENST00000570977 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
TOM1L1-208ENST00000570977 NEURL4Q96JN8 1562 aa9.54□□□□□ -0.88
TOM1L1-208ENST00000570977 MED14O60244 1454 aa9.53□□□□□ -0.88
TOM1L1-208ENST00000570977 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
TOM1L1-208ENST00000570977 A2MP01023 1474 aa9.53□□□□□ -0.88
TOM1L1-208ENST00000570977 ITSN2Q9NZM3 1697 aa9.52□□□□□ -0.89
TOM1L1-208ENST00000570977 HNRNPMP52272 730 aaKnown RBP eCLIP9.52□□□□□ -0.89
TOM1L1-208ENST00000570977 FBXO31Q5XUX0 539 aaPredicted RBP9.52□□□□□ -0.89
TOM1L1-208ENST00000570977 KIAA1107Q9UPP5 1409 aa9.52□□□□□ -0.89
TOM1L1-208ENST00000570977 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-208ENST00000570977 PLXNC1O60486 1568 aa9.51□□□□□ -0.89
TOM1L1-208ENST00000570977 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
TOM1L1-208ENST00000570977 PREX2Q70Z35 1606 aa9.51□□□□□ -0.89
TOM1L1-208ENST00000570977 LRRC7Q96NW7 1537 aa9.51□□□□□ -0.89
TOM1L1-208ENST00000570977 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-208ENST00000570977 TNRQ92752 1358 aa9.5□□□□□ -0.89
TOM1L1-208ENST00000570977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.5□□□□□ -0.89
TOM1L1-208ENST00000570977 NPHP4O75161 1426 aaPredicted RBP9.5□□□□□ -0.89
TOM1L1-208ENST00000570977 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
TOM1L1-208ENST00000570977 ARHGAP35Q9NRY4 1499 aa9.5□□□□□ -0.89
TOM1L1-208ENST00000570977 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
TOM1L1-208ENST00000570977 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
TOM1L1-208ENST00000570977 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
TOM1L1-208ENST00000570977 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
TOM1L1-208ENST00000570977 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
TOM1L1-208ENST00000570977 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-208ENST00000570977 GPATCH8Q9UKJ3 1502 aaKnown RBP9.47□□□□□ -0.89
TOM1L1-208ENST00000570977 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
TOM1L1-208ENST00000570977 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
TOM1L1-208ENST00000570977 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
TOM1L1-208ENST00000570977 NLRP1Q9C000 1473 aa9.47□□□□□ -0.89
TOM1L1-208ENST00000570977 POLR1AO95602 1720 aaPredicted RBP9.46□□□□□ -0.89
TOM1L1-208ENST00000570977 ANO8Q9HCE9 1232 aaPredicted RBP9.46□□□□□ -0.9
TOM1L1-208ENST00000570977 PZPP20742 1482 aa9.46□□□□□ -0.9
TOM1L1-208ENST00000570977 PLEKHH2Q8IVE3 1493 aa9.46□□□□□ -0.9
TOM1L1-208ENST00000570977 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.9
TOM1L1-208ENST00000570977 UBTFP17480 764 aaKnown RBP9.45□□□□□ -0.9
TOM1L1-208ENST00000570977 FOSBP53539 338 aa9.45□□□□□ -0.9
TOM1L1-208ENST00000570977 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
TOM1L1-208ENST00000570977 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
TOM1L1-208ENST00000570977 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
TOM1L1-208ENST00000570977 INO80Q9ULG1 1556 aaPredicted RBP9.45□□□□□ -0.9
TOM1L1-208ENST00000570977 PSEN2P49810 448 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 DDX12PQ92771 950 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 RTEL1-TNFRSF6BF6WH68 1400 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 CCDC18Q5T9S5 1454 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 UGGT1Q9NYU2 1555 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 RNF17Q9BXT8 1623 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 CDC42BPAQ5VT25 1732 aa9.44□□□□□ -0.9
TOM1L1-208ENST00000570977 WASHC2CQ9Y4E1 1318 aa9.43□□□□□ -0.9
TOM1L1-208ENST00000570977 PDIA6Q15084 440 aa9.43□□□□□ -0.9
TOM1L1-208ENST00000570977 ANKRD13DQ6ZTN6 518 aa9.43□□□□□ -0.9
TOM1L1-208ENST00000570977 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
TOM1L1-208ENST00000570977 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
TOM1L1-208ENST00000570977 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
TOM1L1-208ENST00000570977 KIF3BO15066 747 aa9.42□□□□□ -0.9
TOM1L1-208ENST00000570977 SYNMO15061 1565 aa9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 PBX2P40425 430 aa9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 ADAM33Q9BZ11 813 aa9.41□□□□□ -0.9
TOM1L1-208ENST00000570977 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms