RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
CTDNEP1-203ENST00000570385 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
CTDNEP1-203ENST00000570385 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-203ENST00000570385 FOXO3O43524 673 aa12.82□□□□□ -0.36
CTDNEP1-203ENST00000570385 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
CTDNEP1-203ENST00000570385 SPATA31E1Q6ZUB1 1445 aa12.81□□□□□ -0.36
CTDNEP1-203ENST00000570385 RBM6P78332 1123 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-203ENST00000570385 RGS12O14924 1447 aa12.79□□□□□ -0.36
CTDNEP1-203ENST00000570385 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
CTDNEP1-203ENST00000570385 USP21Q9UK80 565 aa12.79□□□□□ -0.36
CTDNEP1-203ENST00000570385 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
CTDNEP1-203ENST00000570385 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
CTDNEP1-203ENST00000570385 NPHP3Q7Z494 1330 aa12.78□□□□□ -0.36
CTDNEP1-203ENST00000570385 LAMC1P11047 1609 aa12.77□□□□□ -0.36
CTDNEP1-203ENST00000570385 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
CTDNEP1-203ENST00000570385 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
CTDNEP1-203ENST00000570385 CFAP70Q5T0N1 1121 aa12.77□□□□□ -0.37
CTDNEP1-203ENST00000570385 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-203ENST00000570385 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.37
CTDNEP1-203ENST00000570385 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
CTDNEP1-203ENST00000570385 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
CTDNEP1-203ENST00000570385 IFT172Q9UG01 1749 aa12.76□□□□□ -0.37
CTDNEP1-203ENST00000570385 TECPR2O15040 1411 aa12.75□□□□□ -0.37
CTDNEP1-203ENST00000570385 PXDNQ92626 1479 aa12.75□□□□□ -0.37
CTDNEP1-203ENST00000570385 YTHDC2Q9H6S0 1430 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-203ENST00000570385 C14orf93Q9H972 538 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-203ENST00000570385 TRPC5Q9UL62 973 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-203ENST00000570385 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-203ENST00000570385 MYOM2P54296 1465 aa12.72□□□□□ -0.37
CTDNEP1-203ENST00000570385 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
CTDNEP1-203ENST00000570385 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
CTDNEP1-203ENST00000570385 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
CTDNEP1-203ENST00000570385 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-203ENST00000570385 COL22A1Q8NFW1 1626 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-203ENST00000570385 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
CTDNEP1-203ENST00000570385 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.37
CTDNEP1-203ENST00000570385 KNDC1Q76NI1 1749 aa12.71□□□□□ -0.38
CTDNEP1-203ENST00000570385 ATRNO75882 1429 aa12.71□□□□□ -0.38
CTDNEP1-203ENST00000570385 SPATA31A3Q5VYP0 1347 aa12.7□□□□□ -0.38
CTDNEP1-203ENST00000570385 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
CTDNEP1-203ENST00000570385 POGKQ9P215 609 aa12.7□□□□□ -0.38
CTDNEP1-203ENST00000570385 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
CTDNEP1-203ENST00000570385 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
CTDNEP1-203ENST00000570385 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
CTDNEP1-203ENST00000570385 RGPD8O14715 1765 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 SIRT1Q96EB6 747 aa12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 TRAK1Q9UPV9 953 aa12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
CTDNEP1-203ENST00000570385 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
CTDNEP1-203ENST00000570385 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-203ENST00000570385 PSME1Q06323 249 aa12.67□□□□□ -0.38
CTDNEP1-203ENST00000570385 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
CTDNEP1-203ENST00000570385 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-203ENST00000570385 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-203ENST00000570385 UNC5CLQ8IV45 518 aa12.66□□□□□ -0.38
CTDNEP1-203ENST00000570385 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-203ENST00000570385 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
CTDNEP1-203ENST00000570385 TNS3Q68CZ2 1445 aa12.64□□□□□ -0.39
CTDNEP1-203ENST00000570385 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-203ENST00000570385 RALGAPBQ86X10 1494 aa12.63□□□□□ -0.39
CTDNEP1-203ENST00000570385 SLIT2O94813 1529 aa12.62□□□□□ -0.39
CTDNEP1-203ENST00000570385 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
CTDNEP1-203ENST00000570385 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
CTDNEP1-203ENST00000570385 ADGRB1O14514 1584 aa12.61□□□□□ -0.39
CTDNEP1-203ENST00000570385 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
CTDNEP1-203ENST00000570385 DLC1Q96QB1 1528 aa12.61□□□□□ -0.39
CTDNEP1-203ENST00000570385 GLI3P10071 1580 aa12.6□□□□□ -0.39
CTDNEP1-203ENST00000570385 SBNO1A3KN83 1393 aa12.6□□□□□ -0.39
CTDNEP1-203ENST00000570385 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CTDNEP1-203ENST00000570385 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 A0A0G2JS52 829 aa12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 MYT1Q01538 1121 aa12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 VPS72Q15906 364 aa12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 ANKARQ7Z5J8 1434 aa12.59□□□□□ -0.39
CTDNEP1-203ENST00000570385 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
CTDNEP1-203ENST00000570385 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-203ENST00000570385 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
CTDNEP1-203ENST00000570385 DEFB132Q7Z7B7 95 aa12.57□□□□□ -0.4
CTDNEP1-203ENST00000570385 CCDC125Q86Z20 511 aa12.57□□□□□ -0.4
CTDNEP1-203ENST00000570385 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
CTDNEP1-203ENST00000570385 BRWD3Q6RI45 1802 aa12.56□□□□□ -0.4
CTDNEP1-203ENST00000570385 EP400Q96L91 3159 aa12.56□□□□□ -0.4
CTDNEP1-203ENST00000570385 PLCH1Q4KWH8 1693 aa12.56□□□□□ -0.4
CTDNEP1-203ENST00000570385 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
CTDNEP1-203ENST00000570385 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
CTDNEP1-203ENST00000570385 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-203ENST00000570385 NUTM2GQ5VZR2 741 aa12.55□□□□□ -0.4
CTDNEP1-203ENST00000570385 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-203ENST00000570385 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
CTDNEP1-203ENST00000570385 HRCP23327 699 aa12.54□□□□□ -0.4
CTDNEP1-203ENST00000570385 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
CTDNEP1-203ENST00000570385 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
CTDNEP1-203ENST00000570385 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-203ENST00000570385 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms