RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, human

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAE1-222	ENST00000569963	POGK	Q9P215	609 aa		28.18	■■■□□ 2.1
NAE1-222	ENST00000569963	ROCK2	O75116	1388 aa	Known RBP	28.17	■■■□□ 2.1
NAE1-222	ENST00000569963	ILDR1	Q86SU0	546 aa	Predicted RBP	28.17	■■■□□ 2.1
NAE1-222	ENST00000569963	SLAIN2	Q9P270	581 aa		28.17	■■■□□ 2.1
NAE1-222	ENST00000569963	GPRASP1	Q5JY77	1395 aa		28.16	■■■□□ 2.1
NAE1-222	ENST00000569963	RALGAPB	Q86X10	1494 aa		28.15	■■■□□ 2.1
NAE1-222	ENST00000569963	PIP4K2B	P78356	416 aa		28.14	■■■□□ 2.1
NAE1-222	ENST00000569963	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.14	■■■□□ 2.1
NAE1-222	ENST00000569963	CDC42BPG	Q6DT37	1551 aa		28.11	■■■□□ 2.09
NAE1-222	ENST00000569963	SCAF1	Q9H7N4	1312 aa	Known RBP	28.1	■■■□□ 2.09
NAE1-222	ENST00000569963	MST1R	Q04912	1400 aa		28.09	■■■□□ 2.09
NAE1-222	ENST00000569963	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.09	■■■□□ 2.09
NAE1-222	ENST00000569963	CARD11	Q9BXL7	1154 aa		28.07	■■■□□ 2.08
NAE1-222	ENST00000569963	ADGRB2	O60241	1585 aa		28.05	■■■□□ 2.08
NAE1-222	ENST00000569963	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.04	■■■□□ 2.08
NAE1-222	ENST00000569963	C1orf167	Q5SNV9	1468 aa		28.03	■■■□□ 2.08
NAE1-222	ENST00000569963	EIF3A	Q14152	1382 aa	Known RBP	28.03	■■■□□ 2.08
NAE1-222	ENST00000569963	ROBO1	Q9Y6N7	1651 aa		28.03	■■■□□ 2.08
NAE1-222	ENST00000569963	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.02	■■■□□ 2.08
NAE1-222	ENST00000569963	FMN2	Q9NZ56	1722 aa		27.99	■■■□□ 2.07
NAE1-222	ENST00000569963	BRINP3	Q76B58	766 aa		27.99	■■■□□ 2.07
NAE1-222	ENST00000569963	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.99	■■■□□ 2.07
NAE1-222	ENST00000569963	WASL	O00401	505 aa	Predicted RBP	27.98	■■■□□ 2.07
NAE1-222	ENST00000569963	HSPA1L	P34931	641 aa		27.95	■■■□□ 2.06
NAE1-222	ENST00000569963	QRICH2	Q9H0J4	1663 aa		27.94	■■■□□ 2.06
NAE1-222	ENST00000569963	ANKAR	Q7Z5J8	1434 aa		27.93	■■■□□ 2.06
NAE1-222	ENST00000569963	ORAI2	Q96SN7	254 aa		27.93	■■■□□ 2.06
NAE1-222	ENST00000569963	SBNO2	Q9Y2G9	1366 aa		27.91	■■■□□ 2.06
NAE1-222	ENST00000569963	NUTM2F	A1L443	756 aa		27.91	■■■□□ 2.06
NAE1-222	ENST00000569963	ESCO1	Q5FWF5	840 aa		27.91	■■■□□ 2.06
NAE1-222	ENST00000569963	CDK19	Q9BWU1	502 aa		27.91	■■■□□ 2.06
NAE1-222	ENST00000569963	TULP4	Q9NRJ4	1543 aa		27.9	■■■□□ 2.06
NAE1-222	ENST00000569963	AHDC1	Q5TGY3	1603 aa	Predicted RBP	27.89	■■■□□ 2.06
NAE1-222	ENST00000569963	USP32	Q8NFA0	1604 aa		27.87	■■■□□ 2.05
NAE1-222	ENST00000569963	SLC24A1	O60721	1099 aa		27.86	■■■□□ 2.05
NAE1-222	ENST00000569963	EVC2	Q86UK5	1308 aa		27.86	■■■□□ 2.05
NAE1-222	ENST00000569963	USP47	Q96K76	1375 aa		27.86	■■■□□ 2.05
NAE1-222	ENST00000569963	NHSL1	Q5SYE7	1610 aa		27.85	■■■□□ 2.05
NAE1-222	ENST00000569963	RGPD8	O14715	1765 aa	Predicted RBP	27.85	■■■□□ 2.05
NAE1-222	ENST00000569963	PRR36	Q9H6K5	1346 aa		27.85	■■■□□ 2.05
NAE1-222	ENST00000569963	PHLPP1	O60346	1717 aa		27.84	■■■□□ 2.05
NAE1-222	ENST00000569963	ST20-MTHFS	A0A0A6YYL1	179 aa		27.84	■■■□□ 2.05
NAE1-222	ENST00000569963	NUDT16	Q96DE0	195 aa	Known RBP	27.84	■■■□□ 2.05
NAE1-222	ENST00000569963	PHF8	Q9UPP1	1060 aa		27.83	■■■□□ 2.05
NAE1-222	ENST00000569963	KIF1A	Q12756	1690 aa		27.83	■■■□□ 2.05
NAE1-222	ENST00000569963	ATP7B	P35670	1465 aa		27.82	■■■□□ 2.04
NAE1-222	ENST00000569963	SRPK2	P78362	688 aa	Known RBP	27.81	■■■□□ 2.04
NAE1-222	ENST00000569963	NPHP3	Q7Z494	1330 aa		27.81	■■■□□ 2.04
NAE1-222	ENST00000569963	TESK2	Q96S53	571 aa		27.8	■■■□□ 2.04
NAE1-222	ENST00000569963	CCDC61	Q9Y6R9	512 aa		27.8	■■■□□ 2.04
NAE1-222	ENST00000569963	COL16A1	Q07092	1604 aa	Predicted RBP	27.8	■■■□□ 2.04
NAE1-222	ENST00000569963	FOXO3	O43524	673 aa		27.79	■■■□□ 2.04
NAE1-222	ENST00000569963	SOS2	Q07890	1332 aa	Predicted RBP	27.78	■■■□□ 2.04
NAE1-222	ENST00000569963	DDX17	Q92841	729 aa	Known RBP	27.78	■■■□□ 2.04
NAE1-222	ENST00000569963	CABP2	Q9NPB3	220 aa		27.78	■■■□□ 2.04
NAE1-222	ENST00000569963	ITSN1	Q15811	1721 aa		27.77	■■■□□ 2.04
NAE1-222	ENST00000569963	PUS7	Q96PZ0	661 aa	Known RBP	27.76	■■■□□ 2.03
NAE1-222	ENST00000569963	PLEKHG3	A1L390	1219 aa		27.75	■■■□□ 2.03
NAE1-222	ENST00000569963	LRRC59	Q96AG4	307 aa	Known RBP	27.75	■■■□□ 2.03
NAE1-222	ENST00000569963	TOPAZ1	Q8N9V7	1692 aa		27.75	■■■□□ 2.03
NAE1-222	ENST00000569963	PMFBP1	Q8TBY8	1022 aa		27.74	■■■□□ 2.03
NAE1-222	ENST00000569963	PXDN	Q92626	1479 aa		27.73	■■■□□ 2.03
NAE1-222	ENST00000569963	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.73	■■■□□ 2.03
NAE1-222	ENST00000569963	ATAD2	Q6PL18	1390 aa		27.72	■■■□□ 2.03
NAE1-222	ENST00000569963	JCAD	Q9P266	1359 aa		27.72	■■■□□ 2.03
NAE1-222	ENST00000569963	PSME1	Q06323	249 aa		27.7	■■■□□ 2.02
NAE1-222	ENST00000569963	KRT28	Q7Z3Y7	464 aa		27.7	■■■□□ 2.02
NAE1-222	ENST00000569963	NGDN	Q8NEJ9	315 aa	Known RBP	27.7	■■■□□ 2.02
NAE1-222	ENST00000569963	PPIP5K1	Q6PFW1	1433 aa		27.69	■■■□□ 2.02
NAE1-222	ENST00000569963	POLR3A	O14802	1390 aa	Predicted RBP	27.69	■■■□□ 2.02
NAE1-222	ENST00000569963	TMF1	P82094	1093 aa		27.68	■■■□□ 2.02
NAE1-222	ENST00000569963	HSPA5	P11021	654 aa	Known RBP	27.66	■■■□□ 2.02
NAE1-222	ENST00000569963	XPC	Q01831	940 aa	Predicted RBP	27.66	■■■□□ 2.02
NAE1-222	ENST00000569963	CABP1	Q9NZU7	370 aa		27.66	■■■□□ 2.02
NAE1-222	ENST00000569963	ACE	P12821	1306 aa		27.66	■■■□□ 2.02
NAE1-222	ENST00000569963	SBNO1	A3KN83	1393 aa		27.65	■■■□□ 2.02
NAE1-222	ENST00000569963	SHPRH	Q149N8	1683 aa		27.65	■■■□□ 2.02
NAE1-222	ENST00000569963	CDCA8	Q53HL2	280 aa		27.64	■■■□□ 2.02
NAE1-222	ENST00000569963	SPATA31A3	Q5VYP0	1347 aa		27.63	■■■□□ 2.01
NAE1-222	ENST00000569963	SPATA31A6	Q5VVP1	1343 aa		27.62	■■■□□ 2.01
NAE1-222	ENST00000569963	PNPLA6	Q8IY17	1366 aa		27.61	■■■□□ 2.01
NAE1-222	ENST00000569963	DISP3	Q9P2K9	1392 aa		27.61	■■■□□ 2.01
NAE1-222	ENST00000569963	ZNF692	Q9BU19	519 aa	Predicted RBP	27.59	■■■□□ 2.01
NAE1-222	ENST00000569963	BRD4	O60885	1362 aa	Predicted RBP	27.59	■■■□□ 2.01
NAE1-222	ENST00000569963	TNS3	Q68CZ2	1445 aa		27.58	■■■□□ 2.01
NAE1-222	ENST00000569963	NINL	Q9Y2I6	1382 aa		27.58	■■■□□ 2.01
NAE1-222	ENST00000569963	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.58	■■■□□ 2.01
NAE1-222	ENST00000569963	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.56	■■■□□ 2
NAE1-222	ENST00000569963	ARHGEF10	O15013	1369 aa		27.55	■■■□□ 2
NAE1-222	ENST00000569963	CPSF1	Q10570	1443 aa	Known RBP	27.55	■■■□□ 2
NAE1-222	ENST00000569963	ZEB1	P37275	1124 aa	Predicted RBP	27.54	■■■□□ 2
NAE1-222	ENST00000569963	TMC1	Q8TDI8	760 aa		27.54	■■■□□ 2
NAE1-222	ENST00000569963	SLC12A5	Q9H2X9	1139 aa		27.54	■■■□□ 2
NAE1-222	ENST00000569963	USP6	P35125	1406 aa		27.52	■■■□□ 2
NAE1-222	ENST00000569963	AKAP12	Q02952	1782 aa		27.51	■■□□□ 1.99
NAE1-222	ENST00000569963	PAK3	O75914	559 aa	Predicted RBP	27.51	■■□□□ 1.99
NAE1-222	ENST00000569963	ALS2	Q96Q42	1657 aa		27.51	■■□□□ 1.99
NAE1-222	ENST00000569963	TERF2IP	Q9NYB0	399 aa		27.5	■■□□□ 1.99
NAE1-222	ENST00000569963	CD163L1	Q9NR16	1453 aa		27.5	■■□□□ 1.99
NAE1-222	ENST00000569963	SSH2	Q76I76	1423 aa		27.5	■■□□□ 1.99

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