RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 FMN2Q9NZ56 1722 aa18.42■□□□□ 0.54
SCAMP2-212ENST00000569904 MEX3CQ5U5Q3 659 aaKnown RBP18.41■□□□□ 0.54
SCAMP2-212ENST00000569904 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
SCAMP2-212ENST00000569904 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
SCAMP2-212ENST00000569904 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
SCAMP2-212ENST00000569904 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.54
SCAMP2-212ENST00000569904 SIRT1Q96EB6 747 aa18.38■□□□□ 0.53
SCAMP2-212ENST00000569904 PXDNQ92626 1479 aa18.38■□□□□ 0.53
SCAMP2-212ENST00000569904 KIF1AQ12756 1690 aa18.37■□□□□ 0.53
SCAMP2-212ENST00000569904 MARF1Q9Y4F3 1742 aaKnown RBP18.37■□□□□ 0.53
SCAMP2-212ENST00000569904 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-212ENST00000569904 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-212ENST00000569904 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-212ENST00000569904 C14orf93Q9H972 538 aaKnown RBP18.36■□□□□ 0.53
SCAMP2-212ENST00000569904 PLEKHH1Q9ULM0 1364 aa18.35■□□□□ 0.53
SCAMP2-212ENST00000569904 HRCP23327 699 aa18.35■□□□□ 0.53
SCAMP2-212ENST00000569904 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
SCAMP2-212ENST00000569904 AFF2P51816 1311 aa18.34■□□□□ 0.53
SCAMP2-212ENST00000569904 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
SCAMP2-212ENST00000569904 TMEM132EQ6IEE7 984 aa18.34■□□□□ 0.53
SCAMP2-212ENST00000569904 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
SCAMP2-212ENST00000569904 RGPD8O14715 1765 aaPredicted RBP18.33■□□□□ 0.53
SCAMP2-212ENST00000569904 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
SCAMP2-212ENST00000569904 STK26Q9P289 416 aa18.32■□□□□ 0.52
SCAMP2-212ENST00000569904 ADGRB2O60241 1585 aa18.31■□□□□ 0.52
SCAMP2-212ENST00000569904 RXRBP28702 533 aa18.31■□□□□ 0.52
SCAMP2-212ENST00000569904 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-212ENST00000569904 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
SCAMP2-212ENST00000569904 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
SCAMP2-212ENST00000569904 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
SCAMP2-212ENST00000569904 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
SCAMP2-212ENST00000569904 USP32Q8NFA0 1604 aa18.27■□□□□ 0.51
SCAMP2-212ENST00000569904 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-212ENST00000569904 FOXO3O43524 673 aa18.26■□□□□ 0.51
SCAMP2-212ENST00000569904 FNBP4Q8N3X1 1017 aaPredicted RBP18.26■□□□□ 0.51
SCAMP2-212ENST00000569904 RGS12O14924 1447 aa18.25■□□□□ 0.51
SCAMP2-212ENST00000569904 RBM6P78332 1123 aaKnown RBP18.25■□□□□ 0.51
SCAMP2-212ENST00000569904 QTRT2Q9H974 415 aaKnown RBP18.24■□□□□ 0.51
SCAMP2-212ENST00000569904 ANKARQ7Z5J8 1434 aa18.23■□□□□ 0.51
SCAMP2-212ENST00000569904 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
SCAMP2-212ENST00000569904 UPF1Q92900 1129 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAMP2-212ENST00000569904 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
SCAMP2-212ENST00000569904 ATRNO75882 1429 aa18.23■□□□□ 0.51
SCAMP2-212ENST00000569904 ARHGEF28Q8N1W1 1705 aaKnown RBP18.22■□□□□ 0.51
SCAMP2-212ENST00000569904 ABCA3Q99758 1704 aa18.22■□□□□ 0.51
SCAMP2-212ENST00000569904 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
SCAMP2-212ENST00000569904 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
SCAMP2-212ENST00000569904 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
SCAMP2-212ENST00000569904 PRAM1Q96QH2 718 aa18.21■□□□□ 0.51
SCAMP2-212ENST00000569904 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
SCAMP2-212ENST00000569904 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
SCAMP2-212ENST00000569904 USP21Q9UK80 565 aa18.19■□□□□ 0.5
SCAMP2-212ENST00000569904 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
SCAMP2-212ENST00000569904 TNS3Q68CZ2 1445 aa18.18■□□□□ 0.5
SCAMP2-212ENST00000569904 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
SCAMP2-212ENST00000569904 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
SCAMP2-212ENST00000569904 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
SCAMP2-212ENST00000569904 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
SCAMP2-212ENST00000569904 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
SCAMP2-212ENST00000569904 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
SCAMP2-212ENST00000569904 SLIT2O94813 1529 aa18.17■□□□□ 0.5
SCAMP2-212ENST00000569904 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
SCAMP2-212ENST00000569904 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
SCAMP2-212ENST00000569904 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
SCAMP2-212ENST00000569904 EP400Q96L91 3159 aa18.15■□□□□ 0.5
SCAMP2-212ENST00000569904 POGKQ9P215 609 aa18.15■□□□□ 0.5
SCAMP2-212ENST00000569904 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
SCAMP2-212ENST00000569904 PSME1Q06323 249 aa18.14■□□□□ 0.49
SCAMP2-212ENST00000569904 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
SCAMP2-212ENST00000569904 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
SCAMP2-212ENST00000569904 CRYBG1Q9Y4K1 1723 aa18.13■□□□□ 0.49
SCAMP2-212ENST00000569904 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCAMP2-212ENST00000569904 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
SCAMP2-212ENST00000569904 ARHGEF10O15013 1369 aa18.12■□□□□ 0.49
SCAMP2-212ENST00000569904 GLI3P10071 1580 aa18.12■□□□□ 0.49
SCAMP2-212ENST00000569904 TOPAZ1Q8N9V7 1692 aa18.1■□□□□ 0.49
SCAMP2-212ENST00000569904 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
SCAMP2-212ENST00000569904 PRR36Q9H6K5 1346 aa18.09■□□□□ 0.49
SCAMP2-212ENST00000569904 WASLO00401 505 aaPredicted RBP18.09■□□□□ 0.49
SCAMP2-212ENST00000569904 ATP7BP35670 1465 aa18.08■□□□□ 0.49
SCAMP2-212ENST00000569904 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
SCAMP2-212ENST00000569904 GJD4Q96KN9 370 aaPredicted RBP18.08■□□□□ 0.48
SCAMP2-212ENST00000569904 NRAPQ86VF7 1730 aa18.08■□□□□ 0.48
SCAMP2-212ENST00000569904 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
SCAMP2-212ENST00000569904 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
SCAMP2-212ENST00000569904 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
SCAMP2-212ENST00000569904 BRWD3Q6RI45 1802 aa18.07■□□□□ 0.48
SCAMP2-212ENST00000569904 PMFBP1Q8TBY8 1022 aa18.06■□□□□ 0.48
SCAMP2-212ENST00000569904 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
SCAMP2-212ENST00000569904 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
SCAMP2-212ENST00000569904 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
SCAMP2-212ENST00000569904 PHRF1Q9P1Y6 1649 aaKnown RBP18.01■□□□□ 0.47
SCAMP2-212ENST00000569904 VPS72Q15906 364 aa18.01■□□□□ 0.47
SCAMP2-212ENST00000569904 ONECUT3O60422 494 aaPredicted RBP18■□□□□ 0.47
SCAMP2-212ENST00000569904 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
SCAMP2-212ENST00000569904 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
SCAMP2-212ENST00000569904 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
SCAMP2-212ENST00000569904 CCDC125Q86Z20 511 aa17.99■□□□□ 0.47
SCAMP2-212ENST00000569904 NUDT16Q96DE0 195 aaKnown RBP17.99■□□□□ 0.47
SCAMP2-212ENST00000569904 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms