RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 NEURL4Q96JN8 1562 aa14.35□□□□□ -0.11
GDE1-205ENST00000569899 ADGRB3O60242 1522 aa14.35□□□□□ -0.11
GDE1-205ENST00000569899 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
GDE1-205ENST00000569899 C3P01024 1663 aa14.34□□□□□ -0.11
GDE1-205ENST00000569899 MADDQ8WXG6 1647 aa14.33□□□□□ -0.12
GDE1-205ENST00000569899 MFRPQ9BY79 579 aa14.32□□□□□ -0.12
GDE1-205ENST00000569899 RIMS1Q86UR5 1692 aaKnown RBP14.32□□□□□ -0.12
GDE1-205ENST00000569899 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
GDE1-205ENST00000569899 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
GDE1-205ENST00000569899 PPLO60437 1756 aa14.31□□□□□ -0.12
GDE1-205ENST00000569899 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
GDE1-205ENST00000569899 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
GDE1-205ENST00000569899 TRPM1Q7Z4N2 1603 aa14.3□□□□□ -0.12
GDE1-205ENST00000569899 ATN1P54259 1190 aaPredicted RBP14.3□□□□□ -0.12
GDE1-205ENST00000569899 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
GDE1-205ENST00000569899 ADAMTSL3P82987 1691 aa14.29□□□□□ -0.12
GDE1-205ENST00000569899 SOX12O15370 315 aa14.29□□□□□ -0.12
GDE1-205ENST00000569899 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
GDE1-205ENST00000569899 UHRF1BP1Q6BDS2 1440 aa14.29□□□□□ -0.12
GDE1-205ENST00000569899 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
GDE1-205ENST00000569899 NBPF8Q3BBV2 869 aa14.28□□□□□ -0.12
GDE1-205ENST00000569899 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
GDE1-205ENST00000569899 PHF8Q9UPP1 1060 aa14.28□□□□□ -0.12
GDE1-205ENST00000569899 ZMYM3Q14202 1370 aa14.27□□□□□ -0.12
GDE1-205ENST00000569899 FBXO31Q5XUX0 539 aaPredicted RBP14.27□□□□□ -0.12
GDE1-205ENST00000569899 RYDENQ9NUL5 291 aaKnown RBP14.27□□□□□ -0.12
GDE1-205ENST00000569899 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.13
GDE1-205ENST00000569899 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
GDE1-205ENST00000569899 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
GDE1-205ENST00000569899 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
GDE1-205ENST00000569899 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
GDE1-205ENST00000569899 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
GDE1-205ENST00000569899 MYOM2P54296 1465 aa14.24□□□□□ -0.13
GDE1-205ENST00000569899 NEXMIFQ5QGS0 1516 aa14.24□□□□□ -0.13
GDE1-205ENST00000569899 NLRP6P59044 892 aa14.24□□□□□ -0.13
GDE1-205ENST00000569899 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
GDE1-205ENST00000569899 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
GDE1-205ENST00000569899 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
GDE1-205ENST00000569899 UBR1Q8IWV7 1749 aa14.22□□□□□ -0.13
GDE1-205ENST00000569899 KIAA1210Q9ULL0 1709 aa14.22□□□□□ -0.13
GDE1-205ENST00000569899 MYO3AQ8NEV4 1616 aa14.21□□□□□ -0.13
GDE1-205ENST00000569899 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
GDE1-205ENST00000569899 IDI1Q13907 227 aa14.21□□□□□ -0.13
GDE1-205ENST00000569899 LAMC1P11047 1609 aa14.21□□□□□ -0.13
GDE1-205ENST00000569899 TNRQ92752 1358 aa14.2□□□□□ -0.14
GDE1-205ENST00000569899 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
GDE1-205ENST00000569899 SLC52A1Q9NWF4 448 aa14.2□□□□□ -0.14
GDE1-205ENST00000569899 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
GDE1-205ENST00000569899 NRXN1Q9ULB1 1477 aa14.19□□□□□ -0.14
GDE1-205ENST00000569899 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
GDE1-205ENST00000569899 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
GDE1-205ENST00000569899 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
GDE1-205ENST00000569899 CEBPAP49715 358 aaPredicted RBP14.18□□□□□ -0.14
GDE1-205ENST00000569899 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
GDE1-205ENST00000569899 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
GDE1-205ENST00000569899 PPP1R37O75864 691 aa14.16□□□□□ -0.14
GDE1-205ENST00000569899 ILDR1Q86SU0 546 aaPredicted RBP14.16□□□□□ -0.14
GDE1-205ENST00000569899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.16□□□□□ -0.14
GDE1-205ENST00000569899 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
GDE1-205ENST00000569899 NLRP1Q9C000 1473 aa14.15□□□□□ -0.14
GDE1-205ENST00000569899 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
GDE1-205ENST00000569899 ZNF142P52746 1687 aaPredicted RBP14.15□□□□□ -0.14
GDE1-205ENST00000569899 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
GDE1-205ENST00000569899 HIRIP3Q9BW71 556 aaPredicted RBP14.14□□□□□ -0.15
GDE1-205ENST00000569899 GPRASP1Q5JY77 1395 aa14.14□□□□□ -0.15
GDE1-205ENST00000569899 RPGRIP1LQ68CZ1 1315 aa14.13□□□□□ -0.15
GDE1-205ENST00000569899 IER5LQ5T953 404 aa14.13□□□□□ -0.15
GDE1-205ENST00000569899 USP47Q96K76 1375 aa14.13□□□□□ -0.15
GDE1-205ENST00000569899 CEP170BQ9Y4F5 1589 aaPredicted RBP14.13□□□□□ -0.15
GDE1-205ENST00000569899 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
GDE1-205ENST00000569899 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
GDE1-205ENST00000569899 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
GDE1-205ENST00000569899 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
GDE1-205ENST00000569899 SETBP1Q9Y6X0 1596 aa14.11□□□□□ -0.15
GDE1-205ENST00000569899 ZFYVE9O95405 1425 aa14.11□□□□□ -0.15
GDE1-205ENST00000569899 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.15
GDE1-205ENST00000569899 IRX5P78411 483 aaPredicted RBP14.11□□□□□ -0.15
GDE1-205ENST00000569899 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
GDE1-205ENST00000569899 CARD11Q9BXL7 1154 aa14.11□□□□□ -0.15
GDE1-205ENST00000569899 PTPRMP28827 1452 aa14.11□□□□□ -0.15
GDE1-205ENST00000569899 RIMS2Q9UQ26 1411 aa14.1□□□□□ -0.15
GDE1-205ENST00000569899 NRXN3Q9Y4C0 1643 aa14.1□□□□□ -0.15
GDE1-205ENST00000569899 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
GDE1-205ENST00000569899 ADGRB1O14514 1584 aa14.09□□□□□ -0.15
GDE1-205ENST00000569899 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.15
GDE1-205ENST00000569899 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.16
GDE1-205ENST00000569899 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
GDE1-205ENST00000569899 CFAP70Q5T0N1 1121 aa14.07□□□□□ -0.16
GDE1-205ENST00000569899 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
GDE1-205ENST00000569899 OCEL1Q9H607 264 aa14.07□□□□□ -0.16
GDE1-205ENST00000569899 SLIT1O75093 1534 aa14.06□□□□□ -0.16
GDE1-205ENST00000569899 ARHGEF28Q8N1W1 1705 aaKnown RBP14.06□□□□□ -0.16
GDE1-205ENST00000569899 ALKQ9UM73 1620 aa14.06□□□□□ -0.16
GDE1-205ENST00000569899 TMEM2Q9UHN6 1383 aa14.06□□□□□ -0.16
GDE1-205ENST00000569899 SCAF11Q99590 1463 aaKnown RBP14.05□□□□□ -0.16
GDE1-205ENST00000569899 ARHGAP23Q9P227 1491 aa14.05□□□□□ -0.16
GDE1-205ENST00000569899 SLC39A7Q92504 469 aa14.05□□□□□ -0.16
GDE1-205ENST00000569899 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
GDE1-205ENST00000569899 COLQQ9Y215 455 aaPredicted RBP14.03□□□□□ -0.16
GDE1-205ENST00000569899 C7P10643 843 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms