RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 ACIN1Q9UKV3 1341 aaKnown RBP27.45■■□□□ 1.99
MSLN-208ENST00000569566 YTHDC2Q9H6S0 1430 aaKnown RBP27.45■■□□□ 1.98
MSLN-208ENST00000569566 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
MSLN-208ENST00000569566 PXDNQ92626 1479 aa27.44■■□□□ 1.98
MSLN-208ENST00000569566 PLEKHH1Q9ULM0 1364 aa27.43■■□□□ 1.98
MSLN-208ENST00000569566 ADGRB2O60241 1585 aa27.43■■□□□ 1.98
MSLN-208ENST00000569566 ABCC11Q96J66 1382 aa27.42■■□□□ 1.98
MSLN-208ENST00000569566 ABCA3Q99758 1704 aa27.41■■□□□ 1.98
MSLN-208ENST00000569566 USP32Q8NFA0 1604 aa27.41■■□□□ 1.98
MSLN-208ENST00000569566 ARHGEF28Q8N1W1 1705 aaKnown RBP27.39■■□□□ 1.98
MSLN-208ENST00000569566 DLC1Q96QB1 1528 aa27.39■■□□□ 1.98
MSLN-208ENST00000569566 ORAI2Q96SN7 254 aa27.38■■□□□ 1.97
MSLN-208ENST00000569566 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
MSLN-208ENST00000569566 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
MSLN-208ENST00000569566 TMEM132EQ6IEE7 984 aa27.35■■□□□ 1.97
MSLN-208ENST00000569566 LRRC59Q96AG4 307 aaKnown RBP27.34■■□□□ 1.97
MSLN-208ENST00000569566 STK26Q9P289 416 aa27.33■■□□□ 1.97
MSLN-208ENST00000569566 NUTM2BA6NNL0 878 aaPredicted RBP27.32■■□□□ 1.96
MSLN-208ENST00000569566 NUTM2EB1AL46 878 aaPredicted RBP27.32■■□□□ 1.96
MSLN-208ENST00000569566 WAPLQ7Z5K2 1190 aa27.32■■□□□ 1.96
MSLN-208ENST00000569566 NUTM2AQ8IVF1 878 aaPredicted RBP27.32■■□□□ 1.96
MSLN-208ENST00000569566 CDK12Q9NYV4 1490 aaPredicted RBP27.32■■□□□ 1.96
MSLN-208ENST00000569566 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.31■■□□□ 1.96
MSLN-208ENST00000569566 C14orf93Q9H972 538 aaKnown RBP27.29■■□□□ 1.96
MSLN-208ENST00000569566 KIAA1210Q9ULL0 1709 aa27.28■■□□□ 1.96
MSLN-208ENST00000569566 AFF2P51816 1311 aa27.28■■□□□ 1.96
MSLN-208ENST00000569566 ZNF772Q68DY9 489 aaPredicted RBP27.28■■□□□ 1.96
MSLN-208ENST00000569566 TRPM3Q9HCF6 1732 aaPredicted RBP27.27■■□□□ 1.96
MSLN-208ENST00000569566 CFAP70Q5T0N1 1121 aa27.26■■□□□ 1.95
MSLN-208ENST00000569566 RGS12O14924 1447 aa27.24■■□□□ 1.95
MSLN-208ENST00000569566 ITSN1Q15811 1721 aa27.24■■□□□ 1.95
MSLN-208ENST00000569566 NPHP3Q7Z494 1330 aa27.24■■□□□ 1.95
MSLN-208ENST00000569566 DHX57Q6P158 1386 aaKnown RBP27.23■■□□□ 1.95
MSLN-208ENST00000569566 PLCH1Q4KWH8 1693 aa27.23■■□□□ 1.95
MSLN-208ENST00000569566 CRYBG1Q9Y4K1 1723 aa27.22■■□□□ 1.95
MSLN-208ENST00000569566 ESCO1Q5FWF5 840 aa27.21■■□□□ 1.95
MSLN-208ENST00000569566 ALS2Q96Q42 1657 aa27.21■■□□□ 1.95
MSLN-208ENST00000569566 NUTM2FA1L443 756 aa27.2■■□□□ 1.94
MSLN-208ENST00000569566 TOPAZ1Q8N9V7 1692 aa27.2■■□□□ 1.94
MSLN-208ENST00000569566 HRCP23327 699 aa27.19■■□□□ 1.94
MSLN-208ENST00000569566 SIRT1Q96EB6 747 aa27.19■■□□□ 1.94
MSLN-208ENST00000569566 C8orf37Q96NL8 207 aa27.19■■□□□ 1.94
MSLN-208ENST00000569566 ANKARQ7Z5J8 1434 aa27.17■■□□□ 1.94
MSLN-208ENST00000569566 TULP4Q9NRJ4 1543 aa27.17■■□□□ 1.94
MSLN-208ENST00000569566 XPCQ01831 940 aaPredicted RBP27.16■■□□□ 1.94
MSLN-208ENST00000569566 FOXO3O43524 673 aa27.15■■□□□ 1.94
MSLN-208ENST00000569566 NWD2Q9ULI1 1742 aa27.15■■□□□ 1.94
MSLN-208ENST00000569566 ADAMTS2O95450 1211 aa27.14■■□□□ 1.94
MSLN-208ENST00000569566 PRAM1Q96QH2 718 aa27.14■■□□□ 1.94
MSLN-208ENST00000569566 TNS3Q68CZ2 1445 aa27.14■■□□□ 1.93
MSLN-208ENST00000569566 ATRNO75882 1429 aa27.12■■□□□ 1.93
MSLN-208ENST00000569566 NRAPQ86VF7 1730 aa27.11■■□□□ 1.93
MSLN-208ENST00000569566 RXRBP28702 533 aa27.11■■□□□ 1.93
MSLN-208ENST00000569566 SAFB2Q14151 953 aaKnown RBP eCLIP27.1■■□□□ 1.93
MSLN-208ENST00000569566 GLI3P10071 1580 aa27.09■■□□□ 1.93
MSLN-208ENST00000569566 BRWD3Q6RI45 1802 aa27.09■■□□□ 1.93
MSLN-208ENST00000569566 ATP7BP35670 1465 aa27.08■■□□□ 1.93
MSLN-208ENST00000569566 BCL9LQ86UU0 1499 aa27.08■■□□□ 1.93
MSLN-208ENST00000569566 DCAF11Q8TEB1 546 aa27.08■■□□□ 1.93
MSLN-208ENST00000569566 SPATA31A3Q5VYP0 1347 aa27.08■■□□□ 1.93
MSLN-208ENST00000569566 SLIT2O94813 1529 aa27.06■■□□□ 1.92
MSLN-208ENST00000569566 QRICH2Q9H0J4 1663 aa27.06■■□□□ 1.92
MSLN-208ENST00000569566 EP400Q96L91 3159 aa27.06■■□□□ 1.92
MSLN-208ENST00000569566 NGLY1Q96IV0 654 aa27.05■■□□□ 1.92
MSLN-208ENST00000569566 PHRF1Q9P1Y6 1649 aaKnown RBP27.05■■□□□ 1.92
MSLN-208ENST00000569566 FNBP4Q8N3X1 1017 aaPredicted RBP27.04■■□□□ 1.92
MSLN-208ENST00000569566 KDM2AQ9Y2K7 1162 aa27.04■■□□□ 1.92
MSLN-208ENST00000569566 RBM6P78332 1123 aaKnown RBP27.03■■□□□ 1.92
MSLN-208ENST00000569566 TRPM1Q7Z4N2 1603 aa27.03■■□□□ 1.92
MSLN-208ENST00000569566 PRR36Q9H6K5 1346 aa27.03■■□□□ 1.92
MSLN-208ENST00000569566 PHF8Q9UPP1 1060 aa27.03■■□□□ 1.92
MSLN-208ENST00000569566 TRAK1Q9UPV9 953 aa27.03■■□□□ 1.92
MSLN-208ENST00000569566 SBNO1A3KN83 1393 aa27.02■■□□□ 1.92
MSLN-208ENST00000569566 UPF1Q92900 1129 aaKnown RBP eCLIP27.02■■□□□ 1.92
MSLN-208ENST00000569566 QTRT2Q9H974 415 aaKnown RBP27.02■■□□□ 1.92
MSLN-208ENST00000569566 EIF3AQ14152 1382 aaKnown RBP27■■□□□ 1.91
MSLN-208ENST00000569566 STAC3Q96MF2 364 aa27■■□□□ 1.91
MSLN-208ENST00000569566 POGKQ9P215 609 aa27■■□□□ 1.91
MSLN-208ENST00000569566 USP21Q9UK80 565 aa27■■□□□ 1.91
MSLN-208ENST00000569566 MINK1Q8N4C8 1332 aaPredicted RBP26.99■■□□□ 1.91
MSLN-208ENST00000569566 KRT28Q7Z3Y7 464 aa26.98■■□□□ 1.91
MSLN-208ENST00000569566 HIRIP3Q9BW71 556 aaPredicted RBP26.98■■□□□ 1.91
MSLN-208ENST00000569566 COL14A1Q05707 1796 aaKnown RBP26.97■■□□□ 1.91
MSLN-208ENST00000569566 TRPC5Q9UL62 973 aaPredicted RBP26.95■■□□□ 1.9
MSLN-208ENST00000569566 ARHGEF10O15013 1369 aa26.95■■□□□ 1.9
MSLN-208ENST00000569566 RALGAPBQ86X10 1494 aa26.93■■□□□ 1.9
MSLN-208ENST00000569566 PMFBP1Q8TBY8 1022 aa26.91■■□□□ 1.9
MSLN-208ENST00000569566 WASLO00401 505 aaPredicted RBP26.9■■□□□ 1.9
MSLN-208ENST00000569566 NRKQ7Z2Y5 1582 aa26.88■■□□□ 1.89
MSLN-208ENST00000569566 ATAD2Q6PL18 1390 aa26.87■■□□□ 1.89
MSLN-208ENST00000569566 CABLES1Q8TDN4 633 aa26.87■■□□□ 1.89
MSLN-208ENST00000569566 PSME1Q06323 249 aa26.86■■□□□ 1.89
MSLN-208ENST00000569566 GPRASP1Q5JY77 1395 aa26.84■■□□□ 1.89
MSLN-208ENST00000569566 UNC5CLQ8IV45 518 aa26.82■■□□□ 1.88
MSLN-208ENST00000569566 THSD7AQ9UPZ6 1657 aa26.82■■□□□ 1.88
MSLN-208ENST00000569566 NBPF1Q3BBV0 1214 aa26.81■■□□□ 1.88
MSLN-208ENST00000569566 GJD4Q96KN9 370 aaPredicted RBP26.81■■□□□ 1.88
MSLN-208ENST00000569566 POLR3AO14802 1390 aaPredicted RBP26.81■■□□□ 1.88
MSLN-208ENST00000569566 AKAP12Q02952 1782 aa26.81■■□□□ 1.88
MSLN-208ENST00000569566 LMO7Q8WWI1 1683 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms