RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
CLN6-209ENST00000569336 ABCC11Q96J66 1382 aa14.23□□□□□ -0.13
CLN6-209ENST00000569336 C14orf93Q9H972 538 aaKnown RBP14.23□□□□□ -0.13
CLN6-209ENST00000569336 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
CLN6-209ENST00000569336 MST1RQ04912 1400 aa14.23□□□□□ -0.13
CLN6-209ENST00000569336 SLAIN2Q9P270 581 aa14.22□□□□□ -0.13
CLN6-209ENST00000569336 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
CLN6-209ENST00000569336 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
CLN6-209ENST00000569336 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
CLN6-209ENST00000569336 TMEM132EQ6IEE7 984 aa14.19□□□□□ -0.14
CLN6-209ENST00000569336 STK26Q9P289 416 aa14.19□□□□□ -0.14
CLN6-209ENST00000569336 MARF1Q9Y4F3 1742 aaKnown RBP14.18□□□□□ -0.14
CLN6-209ENST00000569336 SIRT1Q96EB6 747 aa14.17□□□□□ -0.14
CLN6-209ENST00000569336 C1orf167Q5SNV9 1468 aa14.17□□□□□ -0.14
CLN6-209ENST00000569336 USP32Q8NFA0 1604 aa14.16□□□□□ -0.14
CLN6-209ENST00000569336 TOPAZ1Q8N9V7 1692 aa14.15□□□□□ -0.14
CLN6-209ENST00000569336 POTEAQ6S8J7 498 aa14.15□□□□□ -0.14
CLN6-209ENST00000569336 EIF3AQ14152 1382 aaKnown RBP14.13□□□□□ -0.15
CLN6-209ENST00000569336 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
CLN6-209ENST00000569336 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
CLN6-209ENST00000569336 COL22A1Q8NFW1 1626 aaPredicted RBP14.13□□□□□ -0.15
CLN6-209ENST00000569336 BRINP3Q76B58 766 aa14.13□□□□□ -0.15
CLN6-209ENST00000569336 TULP4Q9NRJ4 1543 aa14.12□□□□□ -0.15
CLN6-209ENST00000569336 NEUROD1Q13562 356 aa14.12□□□□□ -0.15
CLN6-209ENST00000569336 WAPLQ7Z5K2 1190 aa14.12□□□□□ -0.15
CLN6-209ENST00000569336 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
CLN6-209ENST00000569336 JCADQ9P266 1359 aa14.11□□□□□ -0.15
CLN6-209ENST00000569336 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
CLN6-209ENST00000569336 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
CLN6-209ENST00000569336 POGKQ9P215 609 aa14.11□□□□□ -0.15
CLN6-209ENST00000569336 ANKARQ7Z5J8 1434 aa14.1□□□□□ -0.15
CLN6-209ENST00000569336 TRAK1Q9UPV9 953 aa14.1□□□□□ -0.15
CLN6-209ENST00000569336 ABCA3Q99758 1704 aa14.1□□□□□ -0.15
CLN6-209ENST00000569336 PCGF6Q9BYE7 350 aa14.09□□□□□ -0.15
CLN6-209ENST00000569336 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
CLN6-209ENST00000569336 TRPM3Q9HCF6 1732 aaPredicted RBP14.08□□□□□ -0.16
CLN6-209ENST00000569336 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.16
CLN6-209ENST00000569336 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
CLN6-209ENST00000569336 ROCK2O75116 1388 aaKnown RBP14.07□□□□□ -0.16
CLN6-209ENST00000569336 PXDNQ92626 1479 aa14.06□□□□□ -0.16
CLN6-209ENST00000569336 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
CLN6-209ENST00000569336 ALS2Q96Q42 1657 aa14.05□□□□□ -0.16
CLN6-209ENST00000569336 AKAP12Q02952 1782 aa14.05□□□□□ -0.16
CLN6-209ENST00000569336 SPATA31A6Q5VVP1 1343 aa14.05□□□□□ -0.16
CLN6-209ENST00000569336 ESCO1Q5FWF5 840 aa14.04□□□□□ -0.16
CLN6-209ENST00000569336 MINK1Q8N4C8 1332 aaPredicted RBP14.04□□□□□ -0.16
CLN6-209ENST00000569336 ATP7BP35670 1465 aa14.04□□□□□ -0.16
CLN6-209ENST00000569336 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
CLN6-209ENST00000569336 ORAI2Q96SN7 254 aa14.03□□□□□ -0.16
CLN6-209ENST00000569336 GPRASP1Q5JY77 1395 aa14.03□□□□□ -0.16
CLN6-209ENST00000569336 CRYBG1Q9Y4K1 1723 aa14.02□□□□□ -0.16
CLN6-209ENST00000569336 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
CLN6-209ENST00000569336 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.17
CLN6-209ENST00000569336 LRP6O75581 1613 aa14.01□□□□□ -0.17
CLN6-209ENST00000569336 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
CLN6-209ENST00000569336 SOS2Q07890 1332 aaPredicted RBP14.01□□□□□ -0.17
CLN6-209ENST00000569336 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
CLN6-209ENST00000569336 UPF1Q92900 1129 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLN6-209ENST00000569336 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.01□□□□□ -0.17
CLN6-209ENST00000569336 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
CLN6-209ENST00000569336 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
CLN6-209ENST00000569336 MON2Q7Z3U7 1717 aa13.99□□□□□ -0.17
CLN6-209ENST00000569336 PLCH1Q4KWH8 1693 aa13.99□□□□□ -0.17
CLN6-209ENST00000569336 PHF8Q9UPP1 1060 aa13.99□□□□□ -0.17
CLN6-209ENST00000569336 NWD2Q9ULI1 1742 aa13.98□□□□□ -0.17
CLN6-209ENST00000569336 PHRF1Q9P1Y6 1649 aaKnown RBP13.98□□□□□ -0.17
CLN6-209ENST00000569336 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
CLN6-209ENST00000569336 TNS3Q68CZ2 1445 aa13.98□□□□□ -0.17
CLN6-209ENST00000569336 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
CLN6-209ENST00000569336 FOXO3O43524 673 aa13.97□□□□□ -0.17
CLN6-209ENST00000569336 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
CLN6-209ENST00000569336 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
CLN6-209ENST00000569336 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
CLN6-209ENST00000569336 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
CLN6-209ENST00000569336 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
CLN6-209ENST00000569336 NRKQ7Z2Y5 1582 aa13.95□□□□□ -0.18
CLN6-209ENST00000569336 SBNO1A3KN83 1393 aa13.95□□□□□ -0.18
CLN6-209ENST00000569336 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
CLN6-209ENST00000569336 PSME1Q06323 249 aa13.94□□□□□ -0.18
CLN6-209ENST00000569336 ARHGEF10O15013 1369 aa13.94□□□□□ -0.18
CLN6-209ENST00000569336 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
CLN6-209ENST00000569336 PPIP5K1Q6PFW1 1433 aa13.93□□□□□ -0.18
CLN6-209ENST00000569336 CDK19Q9BWU1 502 aa13.93□□□□□ -0.18
CLN6-209ENST00000569336 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
CLN6-209ENST00000569336 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
CLN6-209ENST00000569336 XPCQ01831 940 aaPredicted RBP13.92□□□□□ -0.18
CLN6-209ENST00000569336 KRT28Q7Z3Y7 464 aa13.92□□□□□ -0.18
CLN6-209ENST00000569336 NUDT16Q96DE0 195 aaKnown RBP13.92□□□□□ -0.18
CLN6-209ENST00000569336 SPATA31A3Q5VYP0 1347 aa13.91□□□□□ -0.18
CLN6-209ENST00000569336 NUTM2BA6NNL0 878 aaPredicted RBP13.91□□□□□ -0.18
CLN6-209ENST00000569336 NUTM2EB1AL46 878 aaPredicted RBP13.91□□□□□ -0.18
CLN6-209ENST00000569336 NUTM2AQ8IVF1 878 aaPredicted RBP13.91□□□□□ -0.18
CLN6-209ENST00000569336 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
CLN6-209ENST00000569336 POLR3AO14802 1390 aaPredicted RBP13.91□□□□□ -0.18
CLN6-209ENST00000569336 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
CLN6-209ENST00000569336 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
CLN6-209ENST00000569336 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
CLN6-209ENST00000569336 PIK3C2AO00443 1686 aa13.9□□□□□ -0.18
CLN6-209ENST00000569336 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
CLN6-209ENST00000569336 ATAD2Q6PL18 1390 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms