RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 ZC3H13Q5T200 1668 aaKnown RBP9.61□□□□□ -0.87
CDH13-212ENST00000569144 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
CDH13-212ENST00000569144 TMEM121BQ9BXQ6 578 aaPredicted RBP9.61□□□□□ -0.87
CDH13-212ENST00000569144 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
CDH13-212ENST00000569144 ZNF644Q9H582 1327 aaPredicted RBP9.6□□□□□ -0.87
CDH13-212ENST00000569144 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
CDH13-212ENST00000569144 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
CDH13-212ENST00000569144 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
CDH13-212ENST00000569144 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.58□□□□□ -0.88
CDH13-212ENST00000569144 MTUS2Q5JR59 1369 aa9.58□□□□□ -0.88
CDH13-212ENST00000569144 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
CDH13-212ENST00000569144 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
CDH13-212ENST00000569144 OTUD5Q96G74 571 aa9.57□□□□□ -0.88
CDH13-212ENST00000569144 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
CDH13-212ENST00000569144 XIRP1Q702N8 1843 aaKnown RBP9.56□□□□□ -0.88
CDH13-212ENST00000569144 ARHGAP23Q9P227 1491 aa9.56□□□□□ -0.88
CDH13-212ENST00000569144 UPF1Q92900 1129 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH13-212ENST00000569144 ABCC3O15438 1527 aa9.56□□□□□ -0.88
CDH13-212ENST00000569144 SLIT1O75093 1534 aa9.56□□□□□ -0.88
CDH13-212ENST00000569144 ROBO1Q9Y6N7 1651 aa9.55□□□□□ -0.88
CDH13-212ENST00000569144 NCOA2Q15596 1464 aa9.55□□□□□ -0.88
CDH13-212ENST00000569144 LRRC9Q6ZRR7 1453 aa9.55□□□□□ -0.88
CDH13-212ENST00000569144 TMEM94Q12767 1356 aa9.55□□□□□ -0.88
CDH13-212ENST00000569144 LTKP29376 864 aa9.55□□□□□ -0.88
CDH13-212ENST00000569144 RSPH4AQ5TD94 716 aa9.55□□□□□ -0.88
CDH13-212ENST00000569144 UBR1Q8IWV7 1749 aa9.54□□□□□ -0.88
CDH13-212ENST00000569144 JCADQ9P266 1359 aa9.54□□□□□ -0.88
CDH13-212ENST00000569144 TXNDC2Q86VQ3 553 aa9.54□□□□□ -0.88
CDH13-212ENST00000569144 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
CDH13-212ENST00000569144 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
CDH13-212ENST00000569144 SLAIN1Q8ND83 568 aa9.53□□□□□ -0.88
CDH13-212ENST00000569144 CEP162Q5TB80 1403 aa9.53□□□□□ -0.88
CDH13-212ENST00000569144 EID1Q9Y6B2 187 aa9.52□□□□□ -0.89
CDH13-212ENST00000569144 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
CDH13-212ENST00000569144 KCNA6P17658 529 aa9.51□□□□□ -0.89
CDH13-212ENST00000569144 TMEM92Q6UXU6 159 aa9.51□□□□□ -0.89
CDH13-212ENST00000569144 CADPS2Q86UW7 1296 aa9.51□□□□□ -0.89
CDH13-212ENST00000569144 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
CDH13-212ENST00000569144 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
CDH13-212ENST00000569144 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
CDH13-212ENST00000569144 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
CDH13-212ENST00000569144 ZNF772Q68DY9 489 aaPredicted RBP9.5□□□□□ -0.89
CDH13-212ENST00000569144 PRDM15P57071 1507 aaPredicted RBP9.5□□□□□ -0.89
CDH13-212ENST00000569144 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
CDH13-212ENST00000569144 MROH1Q8NDA8 1641 aa9.49□□□□□ -0.89
CDH13-212ENST00000569144 EIF2AK4Q9P2K8 1649 aaKnown RBP9.49□□□□□ -0.89
CDH13-212ENST00000569144 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
CDH13-212ENST00000569144 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
CDH13-212ENST00000569144 PROSER2Q86WR7 435 aaPredicted RBP9.49□□□□□ -0.89
CDH13-212ENST00000569144 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
CDH13-212ENST00000569144 SPATA31A6Q5VVP1 1343 aa9.49□□□□□ -0.89
CDH13-212ENST00000569144 LRP6O75581 1613 aa9.49□□□□□ -0.89
CDH13-212ENST00000569144 MSH6P52701 1360 aa9.49□□□□□ -0.89
CDH13-212ENST00000569144 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
CDH13-212ENST00000569144 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
CDH13-212ENST00000569144 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
CDH13-212ENST00000569144 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
CDH13-212ENST00000569144 SLAIN2Q9P270 581 aa9.48□□□□□ -0.89
CDH13-212ENST00000569144 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
CDH13-212ENST00000569144 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
CDH13-212ENST00000569144 COL16A1Q07092 1604 aaPredicted RBP9.47□□□□□ -0.89
CDH13-212ENST00000569144 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
CDH13-212ENST00000569144 MEX3CQ5U5Q3 659 aaKnown RBP9.47□□□□□ -0.89
CDH13-212ENST00000569144 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.89
CDH13-212ENST00000569144 TET3O43151 1660 aa9.46□□□□□ -0.89
CDH13-212ENST00000569144 CEP152O94986 1710 aa9.46□□□□□ -0.89
CDH13-212ENST00000569144 KIF3CO14782 793 aa9.46□□□□□ -0.9
CDH13-212ENST00000569144 RXRBP28702 533 aa9.46□□□□□ -0.9
CDH13-212ENST00000569144 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
CDH13-212ENST00000569144 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
CDH13-212ENST00000569144 PDE4AP27815 886 aa9.45□□□□□ -0.9
CDH13-212ENST00000569144 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
CDH13-212ENST00000569144 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
CDH13-212ENST00000569144 EFCAB6Q5THR3 1501 aa9.45□□□□□ -0.9
CDH13-212ENST00000569144 KDM5AP29375 1690 aaKnown RBP9.45□□□□□ -0.9
CDH13-212ENST00000569144 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
CDH13-212ENST00000569144 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
CDH13-212ENST00000569144 AHDC1Q5TGY3 1603 aaPredicted RBP9.42□□□□□ -0.9
CDH13-212ENST00000569144 DUOX2Q9NRD8 1548 aa9.42□□□□□ -0.9
CDH13-212ENST00000569144 NCOA3Q9Y6Q9 1424 aa9.42□□□□□ -0.9
CDH13-212ENST00000569144 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
CDH13-212ENST00000569144 IDI1Q13907 227 aa9.41□□□□□ -0.9
CDH13-212ENST00000569144 SRCAPQ6ZRS2 3230 aa9.4□□□□□ -0.9
CDH13-212ENST00000569144 DSG2Q14126 1118 aa9.4□□□□□ -0.9
CDH13-212ENST00000569144 RGS12O14924 1447 aa9.39□□□□□ -0.91
CDH13-212ENST00000569144 ERBINQ96RT1 1412 aa9.39□□□□□ -0.91
CDH13-212ENST00000569144 CFAP65Q6ZU64 1925 aaKnown RBP9.39□□□□□ -0.91
CDH13-212ENST00000569144 AFF2P51816 1311 aa9.39□□□□□ -0.91
CDH13-212ENST00000569144 FOXK1P85037 733 aa9.39□□□□□ -0.91
CDH13-212ENST00000569144 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
CDH13-212ENST00000569144 ADGRB3O60242 1522 aa9.39□□□□□ -0.91
CDH13-212ENST00000569144 DIP2AQ14689 1571 aa9.38□□□□□ -0.91
CDH13-212ENST00000569144 MFSD10Q14728 455 aa9.38□□□□□ -0.91
CDH13-212ENST00000569144 PPP1R15BQ5SWA1 713 aa9.38□□□□□ -0.91
CDH13-212ENST00000569144 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
CDH13-212ENST00000569144 BCANQ96GW7 911 aa9.38□□□□□ -0.91
CDH13-212ENST00000569144 KANK1Q14678 1352 aa9.37□□□□□ -0.91
CDH13-212ENST00000569144 KIF15Q9NS87 1388 aa9.37□□□□□ -0.91
CDH13-212ENST00000569144 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
CDH13-212ENST00000569144 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms