RNA–Protein interactions for RNA: ENST00000568837.1

IFT140-209, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-209ENST00000568837 DCAF11Q8TEB1 546 aa13.31□□□□□ -0.28
IFT140-209ENST00000568837 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
IFT140-209ENST00000568837 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
IFT140-209ENST00000568837 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
IFT140-209ENST00000568837 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
IFT140-209ENST00000568837 SPATA31A6Q5VVP1 1343 aa13.3□□□□□ -0.28
IFT140-209ENST00000568837 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
IFT140-209ENST00000568837 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
IFT140-209ENST00000568837 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
IFT140-209ENST00000568837 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
IFT140-209ENST00000568837 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
IFT140-209ENST00000568837 ESCO1Q5FWF5 840 aa13.27□□□□□ -0.29
IFT140-209ENST00000568837 MEX3CQ5U5Q3 659 aaKnown RBP13.27□□□□□ -0.29
IFT140-209ENST00000568837 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.29
IFT140-209ENST00000568837 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
IFT140-209ENST00000568837 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
IFT140-209ENST00000568837 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
IFT140-209ENST00000568837 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
IFT140-209ENST00000568837 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
IFT140-209ENST00000568837 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
IFT140-209ENST00000568837 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
IFT140-209ENST00000568837 FOXO3O43524 673 aa13.24□□□□□ -0.29
IFT140-209ENST00000568837 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
IFT140-209ENST00000568837 LAMC1P11047 1609 aa13.23□□□□□ -0.29
IFT140-209ENST00000568837 PXDNQ92626 1479 aa13.23□□□□□ -0.29
IFT140-209ENST00000568837 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
IFT140-209ENST00000568837 POGKQ9P215 609 aa13.22□□□□□ -0.29
IFT140-209ENST00000568837 ADAMTS2O95450 1211 aa13.21□□□□□ -0.29
IFT140-209ENST00000568837 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
IFT140-209ENST00000568837 DLC1Q96QB1 1528 aa13.21□□□□□ -0.29
IFT140-209ENST00000568837 AFF2P51816 1311 aa13.2□□□□□ -0.3
IFT140-209ENST00000568837 NPHP3Q7Z494 1330 aa13.2□□□□□ -0.3
IFT140-209ENST00000568837 MINK1Q8N4C8 1332 aaPredicted RBP13.2□□□□□ -0.3
IFT140-209ENST00000568837 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
IFT140-209ENST00000568837 ZNF772Q68DY9 489 aaPredicted RBP13.19□□□□□ -0.3
IFT140-209ENST00000568837 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
IFT140-209ENST00000568837 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
IFT140-209ENST00000568837 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
IFT140-209ENST00000568837 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
IFT140-209ENST00000568837 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
IFT140-209ENST00000568837 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
IFT140-209ENST00000568837 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
IFT140-209ENST00000568837 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
IFT140-209ENST00000568837 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
IFT140-209ENST00000568837 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
IFT140-209ENST00000568837 SPATA31A3Q5VYP0 1347 aa13.14□□□□□ -0.31
IFT140-209ENST00000568837 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
IFT140-209ENST00000568837 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
IFT140-209ENST00000568837 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
IFT140-209ENST00000568837 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
IFT140-209ENST00000568837 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
IFT140-209ENST00000568837 RXRBP28702 533 aa13.13□□□□□ -0.31
IFT140-209ENST00000568837 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
IFT140-209ENST00000568837 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
IFT140-209ENST00000568837 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
IFT140-209ENST00000568837 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
IFT140-209ENST00000568837 PSME1Q06323 249 aa13.11□□□□□ -0.31
IFT140-209ENST00000568837 USP21Q9UK80 565 aa13.11□□□□□ -0.31
IFT140-209ENST00000568837 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
IFT140-209ENST00000568837 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
IFT140-209ENST00000568837 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
IFT140-209ENST00000568837 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
IFT140-209ENST00000568837 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
IFT140-209ENST00000568837 RGS12O14924 1447 aa13.09□□□□□ -0.31
IFT140-209ENST00000568837 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
IFT140-209ENST00000568837 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
IFT140-209ENST00000568837 ATP7BP35670 1465 aa13.09□□□□□ -0.31
IFT140-209ENST00000568837 SBNO1A3KN83 1393 aa13.08□□□□□ -0.31
IFT140-209ENST00000568837 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.31
IFT140-209ENST00000568837 RBM6P78332 1123 aaKnown RBP13.08□□□□□ -0.32
IFT140-209ENST00000568837 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
IFT140-209ENST00000568837 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.32
IFT140-209ENST00000568837 ATRNO75882 1429 aa13.06□□□□□ -0.32
IFT140-209ENST00000568837 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
IFT140-209ENST00000568837 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
IFT140-209ENST00000568837 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
IFT140-209ENST00000568837 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
IFT140-209ENST00000568837 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
IFT140-209ENST00000568837 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
IFT140-209ENST00000568837 ARHGEF10O15013 1369 aa13.06□□□□□ -0.32
IFT140-209ENST00000568837 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
IFT140-209ENST00000568837 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
IFT140-209ENST00000568837 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
IFT140-209ENST00000568837 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
IFT140-209ENST00000568837 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
IFT140-209ENST00000568837 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
IFT140-209ENST00000568837 SLIT2O94813 1529 aa13.03□□□□□ -0.32
IFT140-209ENST00000568837 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
IFT140-209ENST00000568837 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.33
IFT140-209ENST00000568837 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
IFT140-209ENST00000568837 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
IFT140-209ENST00000568837 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
IFT140-209ENST00000568837 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
IFT140-209ENST00000568837 ACEP12821 1306 aa13.01□□□□□ -0.33
IFT140-209ENST00000568837 POLR3AO14802 1390 aaPredicted RBP13.01□□□□□ -0.33
IFT140-209ENST00000568837 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
IFT140-209ENST00000568837 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
IFT140-209ENST00000568837 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
IFT140-209ENST00000568837 GJD4Q96KN9 370 aaPredicted RBP13□□□□□ -0.33
IFT140-209ENST00000568837 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms