RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 MINK1Q8N4C8 1332 aaPredicted RBP14.36□□□□□ -0.11
PKM-221ENST00000568743 NALCNQ8IZF0 1738 aa14.35□□□□□ -0.11
PKM-221ENST00000568743 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
PKM-221ENST00000568743 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
PKM-221ENST00000568743 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
PKM-221ENST00000568743 ATF3P18847 181 aa14.34□□□□□ -0.11
PKM-221ENST00000568743 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
PKM-221ENST00000568743 EIF3AQ14152 1382 aaKnown RBP14.33□□□□□ -0.12
PKM-221ENST00000568743 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
PKM-221ENST00000568743 FBXO41Q8TF61 875 aa14.32□□□□□ -0.12
PKM-221ENST00000568743 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
PKM-221ENST00000568743 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
PKM-221ENST00000568743 TOM1O60784 492 aa14.31□□□□□ -0.12
PKM-221ENST00000568743 CADPS2Q86UW7 1296 aa14.31□□□□□ -0.12
PKM-221ENST00000568743 USP47Q96K76 1375 aa14.31□□□□□ -0.12
PKM-221ENST00000568743 DCCP43146 1447 aa14.31□□□□□ -0.12
PKM-221ENST00000568743 ST20-MTHFSA0A0A6YYL1 179 aa14.29□□□□□ -0.12
PKM-221ENST00000568743 SLAIN2Q9P270 581 aa14.29□□□□□ -0.12
PKM-221ENST00000568743 MST1RQ04912 1400 aa14.29□□□□□ -0.12
PKM-221ENST00000568743 CDC42BPGQ6DT37 1551 aa14.29□□□□□ -0.12
PKM-221ENST00000568743 QRICH2Q9H0J4 1663 aa14.28□□□□□ -0.12
PKM-221ENST00000568743 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
PKM-221ENST00000568743 WASLO00401 505 aaPredicted RBP14.27□□□□□ -0.13
PKM-221ENST00000568743 C1orf167Q5SNV9 1468 aa14.26□□□□□ -0.13
PKM-221ENST00000568743 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
PKM-221ENST00000568743 CDK19Q9BWU1 502 aa14.26□□□□□ -0.13
PKM-221ENST00000568743 HSPA5P11021 654 aaKnown RBP14.25□□□□□ -0.13
PKM-221ENST00000568743 TULP4Q9NRJ4 1543 aa14.25□□□□□ -0.13
PKM-221ENST00000568743 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
PKM-221ENST00000568743 EIF4G2P78344 907 aaKnown RBP eCLIP14.24□□□□□ -0.13
PKM-221ENST00000568743 TESK2Q96S53 571 aa14.24□□□□□ -0.13
PKM-221ENST00000568743 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
PKM-221ENST00000568743 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
PKM-221ENST00000568743 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
PKM-221ENST00000568743 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
PKM-221ENST00000568743 ESCO1Q5FWF5 840 aa14.23□□□□□ -0.13
PKM-221ENST00000568743 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
PKM-221ENST00000568743 EVC2Q86UK5 1308 aa14.22□□□□□ -0.13
PKM-221ENST00000568743 ROBO1Q9Y6N7 1651 aa14.22□□□□□ -0.13
PKM-221ENST00000568743 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
PKM-221ENST00000568743 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
PKM-221ENST00000568743 DDX17Q92841 729 aaKnown RBP14.21□□□□□ -0.13
PKM-221ENST00000568743 NUDT16Q96DE0 195 aaKnown RBP14.21□□□□□ -0.13
PKM-221ENST00000568743 ATP7BP35670 1465 aa14.2□□□□□ -0.14
PKM-221ENST00000568743 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
PKM-221ENST00000568743 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
PKM-221ENST00000568743 DISP3Q9P2K9 1392 aa14.2□□□□□ -0.14
PKM-221ENST00000568743 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
PKM-221ENST00000568743 HSPA1LP34931 641 aa14.18□□□□□ -0.14
PKM-221ENST00000568743 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
PKM-221ENST00000568743 TMF1P82094 1093 aa14.17□□□□□ -0.14
PKM-221ENST00000568743 XPCQ01831 940 aaPredicted RBP14.17□□□□□ -0.14
PKM-221ENST00000568743 RGPD8O14715 1765 aaPredicted RBP14.17□□□□□ -0.14
PKM-221ENST00000568743 FOXO3O43524 673 aa14.16□□□□□ -0.14
PKM-221ENST00000568743 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
PKM-221ENST00000568743 PPIP5K1Q6PFW1 1433 aa14.15□□□□□ -0.14
PKM-221ENST00000568743 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
PKM-221ENST00000568743 ATAD2Q6PL18 1390 aa14.14□□□□□ -0.15
PKM-221ENST00000568743 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
PKM-221ENST00000568743 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
PKM-221ENST00000568743 AHDC1Q5TGY3 1603 aaPredicted RBP14.13□□□□□ -0.15
PKM-221ENST00000568743 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
PKM-221ENST00000568743 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
PKM-221ENST00000568743 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
PKM-221ENST00000568743 TOPAZ1Q8N9V7 1692 aa14.13□□□□□ -0.15
PKM-221ENST00000568743 NPHP3Q7Z494 1330 aa14.13□□□□□ -0.15
PKM-221ENST00000568743 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
PKM-221ENST00000568743 PLEKHG3A1L390 1219 aa14.12□□□□□ -0.15
PKM-221ENST00000568743 ACEP12821 1306 aa14.12□□□□□ -0.15
PKM-221ENST00000568743 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
PKM-221ENST00000568743 PHLPP1O60346 1717 aa14.11□□□□□ -0.15
PKM-221ENST00000568743 PSME1Q06323 249 aa14.11□□□□□ -0.15
PKM-221ENST00000568743 ITSN1Q15811 1721 aa14.11□□□□□ -0.15
PKM-221ENST00000568743 SLC12A5Q9H2X9 1139 aa14.11□□□□□ -0.15
PKM-221ENST00000568743 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
PKM-221ENST00000568743 KRT28Q7Z3Y7 464 aa14.1□□□□□ -0.15
PKM-221ENST00000568743 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
PKM-221ENST00000568743 PXDNQ92626 1479 aa14.1□□□□□ -0.15
PKM-221ENST00000568743 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
PKM-221ENST00000568743 POLR3AO14802 1390 aaPredicted RBP14.09□□□□□ -0.15
PKM-221ENST00000568743 COL16A1Q07092 1604 aaPredicted RBP14.09□□□□□ -0.15
PKM-221ENST00000568743 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
PKM-221ENST00000568743 CD163L1Q9NR16 1453 aa14.06□□□□□ -0.16
PKM-221ENST00000568743 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
PKM-221ENST00000568743 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
PKM-221ENST00000568743 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
PKM-221ENST00000568743 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
PKM-221ENST00000568743 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
PKM-221ENST00000568743 A0A1W2PP64 1363 aa14.05□□□□□ -0.16
PKM-221ENST00000568743 KTN1Q86UP2 1357 aaKnown RBP14.05□□□□□ -0.16
PKM-221ENST00000568743 TERF2IPQ9NYB0 399 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 SBNO1A3KN83 1393 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 PNPLA6Q8IY17 1366 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 JCADQ9P266 1359 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 NINLQ9Y2I6 1382 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 USP6P35125 1406 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
PKM-221ENST00000568743 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
PKM-221ENST00000568743 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms