RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 ALKQ9UM73 1620 aa6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 KIF1BO60333 1816 aa6.97□□□□□ -1.29
HERPUD1-213ENST00000568358 PIK3R4Q99570 1358 aa6.96□□□□□ -1.29
HERPUD1-213ENST00000568358 SPHKAPQ2M3C7 1700 aa6.96□□□□□ -1.29
HERPUD1-213ENST00000568358 NCOA3Q9Y6Q9 1424 aa6.96□□□□□ -1.3
HERPUD1-213ENST00000568358 DIP2AQ14689 1571 aa6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 RRBP1Q9P2E9 1410 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 VGFO15240 615 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 IFNLR1Q8IU57 520 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 SP7Q8TDD2 431 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 SSUH2Q9Y2M2 353 aa6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 ROBO1Q9Y6N7 1651 aa6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 TRPM2O94759 1503 aa6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 NWD1Q149M9 1564 aa6.95□□□□□ -1.3
HERPUD1-213ENST00000568358 PHLPP1O60346 1717 aa6.94□□□□□ -1.3
HERPUD1-213ENST00000568358 ACIN1Q9UKV3 1341 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-213ENST00000568358 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-213ENST00000568358 RPGRIP1LQ68CZ1 1315 aa6.93□□□□□ -1.3
HERPUD1-213ENST00000568358 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-213ENST00000568358 NAIPQ13075 1403 aa6.93□□□□□ -1.3
HERPUD1-213ENST00000568358 ADAMTS13Q76LX8 1427 aa6.93□□□□□ -1.3
HERPUD1-213ENST00000568358 HAX1O00165 279 aa6.92□□□□□ -1.3
HERPUD1-213ENST00000568358 PAXIP1Q6ZW49 1069 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-213ENST00000568358 CLEC11AQ9Y240 323 aa6.92□□□□□ -1.3
HERPUD1-213ENST00000568358 JCADQ9P266 1359 aa6.92□□□□□ -1.3
HERPUD1-213ENST00000568358 HFM1A2PYH4 1435 aa6.91□□□□□ -1.3
HERPUD1-213ENST00000568358 TSHZ2Q9NRE2 1034 aa6.9□□□□□ -1.3
HERPUD1-213ENST00000568358 SPATA31A6Q5VVP1 1343 aa6.9□□□□□ -1.3
HERPUD1-213ENST00000568358 SETBP1Q9Y6X0 1596 aa6.9□□□□□ -1.31
HERPUD1-213ENST00000568358 CLTCL1P53675 1640 aa6.9□□□□□ -1.31
HERPUD1-213ENST00000568358 NUTM2BA6NNL0 878 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 NUTM2EB1AL46 878 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 RGL3Q3MIN7 710 aa6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 ZNF772Q68DY9 489 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 NUTM2AQ8IVF1 878 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 LRRC59Q96AG4 307 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 MPHOSPH9Q99550 1183 aa6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 RGS17Q9UGC6 210 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 METP08581 1390 aa6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 PTPRUQ92729 1446 aa6.89□□□□□ -1.31
HERPUD1-213ENST00000568358 DCCP43146 1447 aa6.88□□□□□ -1.31
HERPUD1-213ENST00000568358 BRINP3Q76B58 766 aa6.88□□□□□ -1.31
HERPUD1-213ENST00000568358 NEXMIFQ5QGS0 1516 aa6.87□□□□□ -1.31
HERPUD1-213ENST00000568358 CCDC144AA2RUR9 1427 aa6.87□□□□□ -1.31
HERPUD1-213ENST00000568358 PRKAR2AP13861 404 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-213ENST00000568358 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
HERPUD1-213ENST00000568358 NRXN3Q9Y4C0 1643 aa6.87□□□□□ -1.31
HERPUD1-213ENST00000568358 PPLO60437 1756 aa6.86□□□□□ -1.31
HERPUD1-213ENST00000568358 XRN1Q8IZH2 1706 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-213ENST00000568358 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-213ENST00000568358 AHDC1Q5TGY3 1603 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-213ENST00000568358 ADGRL3Q9HAR2 1447 aa6.85□□□□□ -1.31
HERPUD1-213ENST00000568358 ANKRD30BQ9BXX2 1392 aa6.85□□□□□ -1.31
HERPUD1-213ENST00000568358 SHPRHQ149N8 1683 aa6.85□□□□□ -1.31
HERPUD1-213ENST00000568358 RXRBP28702 533 aa6.85□□□□□ -1.31
HERPUD1-213ENST00000568358 NBR1Q14596 966 aa6.85□□□□□ -1.31
HERPUD1-213ENST00000568358 STK26Q9P289 416 aa6.85□□□□□ -1.31
HERPUD1-213ENST00000568358 MST1RQ04912 1400 aa6.84□□□□□ -1.31
HERPUD1-213ENST00000568358 ESCO1Q5FWF5 840 aa6.84□□□□□ -1.31
HERPUD1-213ENST00000568358 SPRYD3Q8NCJ5 442 aa6.84□□□□□ -1.31
HERPUD1-213ENST00000568358 CFAP44Q96MT7 982 aa6.84□□□□□ -1.31
HERPUD1-213ENST00000568358 ASXL1Q8IXJ9 1541 aa6.84□□□□□ -1.31
HERPUD1-213ENST00000568358 PTCH1Q13635 1447 aa6.84□□□□□ -1.32
HERPUD1-213ENST00000568358 SETD5Q9C0A6 1442 aa6.84□□□□□ -1.32
HERPUD1-213ENST00000568358 ADGRF5Q8IZF2 1346 aa6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 PRR29P0C7W0 189 aa6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 DDX17Q92841 729 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 NGLY1Q96IV0 654 aa6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 C8orf37Q96NL8 207 aa6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 SETD1AO15047 1707 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 NALCNQ8IZF0 1738 aa6.83□□□□□ -1.32
HERPUD1-213ENST00000568358 LRPPRCP42704 1394 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 ROBO2Q9HCK4 1378 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 AFF2P51816 1311 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 C1orf167Q5SNV9 1468 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 ADAMTS2O95450 1211 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 TMEM132EQ6IEE7 984 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 ORAI2Q96SN7 254 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 NHSL1Q5SYE7 1610 aa6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 DHX57Q6P158 1386 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-213ENST00000568358 NPHP3Q7Z494 1330 aa6.81□□□□□ -1.32
HERPUD1-213ENST00000568358 NUTM2FA1L443 756 aa6.81□□□□□ -1.32
HERPUD1-213ENST00000568358 WAPLQ7Z5K2 1190 aa6.81□□□□□ -1.32
HERPUD1-213ENST00000568358 SOS2Q07890 1332 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 LRP6O75581 1613 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 SPDYE4A6NLX3 237 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 FOXO3O43524 673 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 RBM6P78332 1123 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 PSME1Q06323 249 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 SIRT1Q96EB6 747 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 STAC3Q96MF2 364 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 C14orf93Q9H972 538 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 POGKQ9P215 609 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 PNPLA6Q8IY17 1366 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 ABCC11Q96J66 1382 aa6.8□□□□□ -1.32
HERPUD1-213ENST00000568358 IFT172Q9UG01 1749 aa6.79□□□□□ -1.32
HERPUD1-213ENST00000568358 SPATA31E1Q6ZUB1 1445 aa6.79□□□□□ -1.32
HERPUD1-213ENST00000568358 HRCP23327 699 aa6.79□□□□□ -1.32
HERPUD1-213ENST00000568358 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms