RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
KLHDC4-220ENST00000568338 NOS1P29475 1434 aa12.57□□□□□ -0.4
KLHDC4-220ENST00000568338 IQGAP3Q86VI3 1631 aa12.57□□□□□ -0.4
KLHDC4-220ENST00000568338 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
KLHDC4-220ENST00000568338 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
KLHDC4-220ENST00000568338 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
KLHDC4-220ENST00000568338 SETBP1Q9Y6X0 1596 aa12.56□□□□□ -0.4
KLHDC4-220ENST00000568338 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
KLHDC4-220ENST00000568338 NUP155O75694 1391 aa12.55□□□□□ -0.4
KLHDC4-220ENST00000568338 REM2Q8IYK8 340 aaPredicted RBP12.54□□□□□ -0.4
KLHDC4-220ENST00000568338 DCCP43146 1447 aa12.54□□□□□ -0.4
KLHDC4-220ENST00000568338 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
KLHDC4-220ENST00000568338 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.53□□□□□ -0.4
KLHDC4-220ENST00000568338 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
KLHDC4-220ENST00000568338 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
KLHDC4-220ENST00000568338 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
KLHDC4-220ENST00000568338 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
KLHDC4-220ENST00000568338 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
KLHDC4-220ENST00000568338 RPRD2Q5VT52 1461 aaKnown RBP12.51□□□□□ -0.41
KLHDC4-220ENST00000568338 TRPM2O94759 1503 aa12.51□□□□□ -0.41
KLHDC4-220ENST00000568338 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
KLHDC4-220ENST00000568338 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
KLHDC4-220ENST00000568338 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
KLHDC4-220ENST00000568338 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
KLHDC4-220ENST00000568338 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
KLHDC4-220ENST00000568338 USP21Q9UK80 565 aa12.49□□□□□ -0.41
KLHDC4-220ENST00000568338 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
KLHDC4-220ENST00000568338 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
KLHDC4-220ENST00000568338 MST1RQ04912 1400 aa12.48□□□□□ -0.41
KLHDC4-220ENST00000568338 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
KLHDC4-220ENST00000568338 AMOTL2Q9Y2J4 779 aa12.48□□□□□ -0.41
KLHDC4-220ENST00000568338 E9PCH4 1651 aa12.46□□□□□ -0.41
KLHDC4-220ENST00000568338 POTEHQ6S545 545 aa12.45□□□□□ -0.42
KLHDC4-220ENST00000568338 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
KLHDC4-220ENST00000568338 ANKRD30BQ9BXX2 1392 aa12.44□□□□□ -0.42
KLHDC4-220ENST00000568338 MYO5BQ9ULV0 1848 aa12.44□□□□□ -0.42
KLHDC4-220ENST00000568338 PTPRUQ92729 1446 aa12.44□□□□□ -0.42
KLHDC4-220ENST00000568338 SPHKAPQ2M3C7 1700 aa12.43□□□□□ -0.42
KLHDC4-220ENST00000568338 ATRNO75882 1429 aa12.43□□□□□ -0.42
KLHDC4-220ENST00000568338 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
KLHDC4-220ENST00000568338 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
KLHDC4-220ENST00000568338 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
KLHDC4-220ENST00000568338 LRP5O75197 1615 aa12.41□□□□□ -0.42
KLHDC4-220ENST00000568338 XRN1Q8IZH2 1706 aaKnown RBP12.41□□□□□ -0.42
KLHDC4-220ENST00000568338 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
KLHDC4-220ENST00000568338 BLMP54132 1417 aaPredicted RBP12.4□□□□□ -0.42
KLHDC4-220ENST00000568338 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
KLHDC4-220ENST00000568338 SIN3AQ96ST3 1273 aa12.39□□□□□ -0.43
KLHDC4-220ENST00000568338 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
KLHDC4-220ENST00000568338 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
KLHDC4-220ENST00000568338 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
KLHDC4-220ENST00000568338 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
KLHDC4-220ENST00000568338 C1orf167Q5SNV9 1468 aa12.37□□□□□ -0.43
KLHDC4-220ENST00000568338 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
KLHDC4-220ENST00000568338 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
KLHDC4-220ENST00000568338 NALCNQ8IZF0 1738 aa12.36□□□□□ -0.43
KLHDC4-220ENST00000568338 LAMC1P11047 1609 aa12.36□□□□□ -0.43
KLHDC4-220ENST00000568338 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
KLHDC4-220ENST00000568338 COL22A1Q8NFW1 1626 aaPredicted RBP12.35□□□□□ -0.43
KLHDC4-220ENST00000568338 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
KLHDC4-220ENST00000568338 METP08581 1390 aa12.34□□□□□ -0.43
KLHDC4-220ENST00000568338 CLTCL1P53675 1640 aa12.34□□□□□ -0.43
KLHDC4-220ENST00000568338 NRXN3Q9Y4C0 1643 aa12.34□□□□□ -0.43
KLHDC4-220ENST00000568338 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
KLHDC4-220ENST00000568338 MYOM2P54296 1465 aa12.33□□□□□ -0.44
KLHDC4-220ENST00000568338 EP400Q96L91 3159 aa12.32□□□□□ -0.44
KLHDC4-220ENST00000568338 KIF1BO60333 1816 aa12.32□□□□□ -0.44
KLHDC4-220ENST00000568338 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
KLHDC4-220ENST00000568338 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
KLHDC4-220ENST00000568338 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
KLHDC4-220ENST00000568338 RALGAPBQ86X10 1494 aa12.31□□□□□ -0.44
KLHDC4-220ENST00000568338 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
KLHDC4-220ENST00000568338 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
KLHDC4-220ENST00000568338 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
KLHDC4-220ENST00000568338 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
KLHDC4-220ENST00000568338 GLI3P10071 1580 aa12.28□□□□□ -0.44
KLHDC4-220ENST00000568338 BAG6P46379 1132 aa12.28□□□□□ -0.44
KLHDC4-220ENST00000568338 MARF1Q9Y4F3 1742 aaKnown RBP12.27□□□□□ -0.45
KLHDC4-220ENST00000568338 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
KLHDC4-220ENST00000568338 YY1P25490 414 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 ESCO1Q5FWF5 840 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 PXDNQ92626 1479 aa12.26□□□□□ -0.45
KLHDC4-220ENST00000568338 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.45
KLHDC4-220ENST00000568338 LRPPRCP42704 1394 aaKnown RBP12.25□□□□□ -0.45
KLHDC4-220ENST00000568338 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
KLHDC4-220ENST00000568338 SLIT2O94813 1529 aa12.25□□□□□ -0.45
KLHDC4-220ENST00000568338 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
KLHDC4-220ENST00000568338 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
KLHDC4-220ENST00000568338 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
KLHDC4-220ENST00000568338 IFT172Q9UG01 1749 aa12.23□□□□□ -0.45
KLHDC4-220ENST00000568338 A0A0G2JS52 829 aa12.23□□□□□ -0.45
KLHDC4-220ENST00000568338 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
KLHDC4-220ENST00000568338 MYT1Q01538 1121 aa12.23□□□□□ -0.45
KLHDC4-220ENST00000568338 FOXO3O43524 673 aa12.22□□□□□ -0.45
KLHDC4-220ENST00000568338 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.45
KLHDC4-220ENST00000568338 PPLO60437 1756 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms