RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 FNBP4Q8N3X1 1017 aaPredicted RBP22.56■■□□□ 1.2
COMMD4-223ENST00000568301 TRPC5Q9UL62 973 aaPredicted RBP22.56■■□□□ 1.2
COMMD4-223ENST00000568301 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
COMMD4-223ENST00000568301 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
COMMD4-223ENST00000568301 ATRNO75882 1429 aa22.52■■□□□ 1.2
COMMD4-223ENST00000568301 FOXD1Q16676 465 aa22.52■■□□□ 1.2
COMMD4-223ENST00000568301 ESCO1Q5FWF5 840 aa22.52■■□□□ 1.2
COMMD4-223ENST00000568301 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
COMMD4-223ENST00000568301 MYOM2P54296 1465 aa22.49■■□□□ 1.19
COMMD4-223ENST00000568301 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
COMMD4-223ENST00000568301 NPHP3Q7Z494 1330 aa22.49■■□□□ 1.19
COMMD4-223ENST00000568301 PXDNQ92626 1479 aa22.48■■□□□ 1.19
COMMD4-223ENST00000568301 FOXO3O43524 673 aa22.48■■□□□ 1.19
COMMD4-223ENST00000568301 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
COMMD4-223ENST00000568301 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
COMMD4-223ENST00000568301 ADGRF5Q8IZF2 1346 aa22.47■■□□□ 1.19
COMMD4-223ENST00000568301 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
COMMD4-223ENST00000568301 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
COMMD4-223ENST00000568301 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
COMMD4-223ENST00000568301 RGL3Q3MIN7 710 aa22.46■■□□□ 1.19
COMMD4-223ENST00000568301 NUTM2FA1L443 756 aa22.45■■□□□ 1.18
COMMD4-223ENST00000568301 WAPLQ7Z5K2 1190 aa22.45■■□□□ 1.18
COMMD4-223ENST00000568301 STK26Q9P289 416 aa22.45■■□□□ 1.18
COMMD4-223ENST00000568301 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
COMMD4-223ENST00000568301 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.18
COMMD4-223ENST00000568301 TECPR2O15040 1411 aa22.43■■□□□ 1.18
COMMD4-223ENST00000568301 IFT172Q9UG01 1749 aa22.43■■□□□ 1.18
COMMD4-223ENST00000568301 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
COMMD4-223ENST00000568301 ABCC11Q96J66 1382 aa22.41■■□□□ 1.18
COMMD4-223ENST00000568301 GJD4Q96KN9 370 aaPredicted RBP22.41■■□□□ 1.18
COMMD4-223ENST00000568301 PLEKHH1Q9ULM0 1364 aa22.39■■□□□ 1.18
COMMD4-223ENST00000568301 TMEM132EQ6IEE7 984 aa22.39■■□□□ 1.17
COMMD4-223ENST00000568301 ZRANB1Q9UGI0 708 aa22.39■■□□□ 1.17
COMMD4-223ENST00000568301 PIK3C2GO75747 1445 aa22.38■■□□□ 1.17
COMMD4-223ENST00000568301 CCDC125Q86Z20 511 aa22.37■■□□□ 1.17
COMMD4-223ENST00000568301 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
COMMD4-223ENST00000568301 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
COMMD4-223ENST00000568301 UNC5CLQ8IV45 518 aa22.35■■□□□ 1.17
COMMD4-223ENST00000568301 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
COMMD4-223ENST00000568301 SPATA31A3Q5VYP0 1347 aa22.34■■□□□ 1.17
COMMD4-223ENST00000568301 FMN2Q9NZ56 1722 aa22.34■■□□□ 1.17
COMMD4-223ENST00000568301 YTHDC2Q9H6S0 1430 aaKnown RBP22.33■■□□□ 1.17
COMMD4-223ENST00000568301 SLIT2O94813 1529 aa22.33■■□□□ 1.17
COMMD4-223ENST00000568301 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
COMMD4-223ENST00000568301 RALGAPBQ86X10 1494 aa22.33■■□□□ 1.16
COMMD4-223ENST00000568301 GLI3P10071 1580 aa22.33■■□□□ 1.16
COMMD4-223ENST00000568301 KRT28Q7Z3Y7 464 aa22.32■■□□□ 1.16
COMMD4-223ENST00000568301 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
COMMD4-223ENST00000568301 RGPD8O14715 1765 aaPredicted RBP22.29■■□□□ 1.16
COMMD4-223ENST00000568301 BRWD3Q6RI45 1802 aa22.29■■□□□ 1.16
COMMD4-223ENST00000568301 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
COMMD4-223ENST00000568301 USP32Q8NFA0 1604 aa22.28■■□□□ 1.16
COMMD4-223ENST00000568301 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
COMMD4-223ENST00000568301 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.16
COMMD4-223ENST00000568301 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
COMMD4-223ENST00000568301 PLEKHG5O94827 1062 aa22.26■■□□□ 1.15
COMMD4-223ENST00000568301 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
COMMD4-223ENST00000568301 DEFB132Q7Z7B7 95 aa22.25■■□□□ 1.15
COMMD4-223ENST00000568301 PHF8Q9UPP1 1060 aa22.25■■□□□ 1.15
COMMD4-223ENST00000568301 TNS3Q68CZ2 1445 aa22.24■■□□□ 1.15
COMMD4-223ENST00000568301 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
COMMD4-223ENST00000568301 SEPT12Q8IYM1 358 aa22.24■■□□□ 1.15
COMMD4-223ENST00000568301 PSME1Q06323 249 aa22.23■■□□□ 1.15
COMMD4-223ENST00000568301 VPS72Q15906 364 aa22.22■■□□□ 1.15
COMMD4-223ENST00000568301 SAFB2Q14151 953 aaKnown RBP eCLIP22.21■■□□□ 1.15
COMMD4-223ENST00000568301 LMOD2Q6P5Q4 547 aa22.2■■□□□ 1.14
COMMD4-223ENST00000568301 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
COMMD4-223ENST00000568301 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.14
COMMD4-223ENST00000568301 ONECUT3O60422 494 aaPredicted RBP22.19■■□□□ 1.14
COMMD4-223ENST00000568301 PRAM1Q96QH2 718 aa22.19■■□□□ 1.14
COMMD4-223ENST00000568301 CCDC9Q9Y3X0 531 aaKnown RBP22.19■■□□□ 1.14
COMMD4-223ENST00000568301 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
COMMD4-223ENST00000568301 NWD2Q9ULI1 1742 aa22.18■■□□□ 1.14
COMMD4-223ENST00000568301 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
COMMD4-223ENST00000568301 ABCA3Q99758 1704 aa22.17■■□□□ 1.14
COMMD4-223ENST00000568301 DLC1Q96QB1 1528 aa22.17■■□□□ 1.14
COMMD4-223ENST00000568301 FAM83GA6ND36 823 aa22.17■■□□□ 1.14
COMMD4-223ENST00000568301 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
COMMD4-223ENST00000568301 KRT27Q7Z3Y8 459 aa22.16■■□□□ 1.14
COMMD4-223ENST00000568301 POGKQ9P215 609 aa22.16■■□□□ 1.14
COMMD4-223ENST00000568301 ARHGEF10O15013 1369 aa22.15■■□□□ 1.14
COMMD4-223ENST00000568301 STAC3Q96MF2 364 aa22.14■■□□□ 1.13
COMMD4-223ENST00000568301 ANKARQ7Z5J8 1434 aa22.13■■□□□ 1.13
COMMD4-223ENST00000568301 ADGRB1O14514 1584 aa22.12■■□□□ 1.13
COMMD4-223ENST00000568301 HRCP23327 699 aa22.11■■□□□ 1.13
COMMD4-223ENST00000568301 A0A0G2JS52 829 aa22.1■■□□□ 1.13
COMMD4-223ENST00000568301 ADGRB2O60241 1585 aa22.1■■□□□ 1.13
COMMD4-223ENST00000568301 MYT1Q01538 1121 aa22.1■■□□□ 1.13
COMMD4-223ENST00000568301 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
COMMD4-223ENST00000568301 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
COMMD4-223ENST00000568301 DCAF11Q8TEB1 546 aa22.09■■□□□ 1.13
COMMD4-223ENST00000568301 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
COMMD4-223ENST00000568301 BTG4Q9NY30 223 aa22.09■■□□□ 1.13
COMMD4-223ENST00000568301 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
COMMD4-223ENST00000568301 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
COMMD4-223ENST00000568301 KDM2AQ9Y2K7 1162 aa22.08■■□□□ 1.13
COMMD4-223ENST00000568301 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
COMMD4-223ENST00000568301 ALS2Q96Q42 1657 aa22.05■■□□□ 1.12
COMMD4-223ENST00000568301 PSDA5PKW4 1024 aaPredicted RBP22.05■■□□□ 1.12
COMMD4-223ENST00000568301 BAG6P46379 1132 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms