RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 COPS2P61201 443 aa8.6□□□□□ -1.03
HERPUD1-212ENST00000567944 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
HERPUD1-212ENST00000567944 QPCTQ16769 361 aa8.59□□□□□ -1.03
HERPUD1-212ENST00000567944 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
HERPUD1-212ENST00000567944 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
HERPUD1-212ENST00000567944 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
HERPUD1-212ENST00000567944 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-212ENST00000567944 LILRB3O75022 631 aa8.57□□□□□ -1.04
HERPUD1-212ENST00000567944 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
HERPUD1-212ENST00000567944 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
HERPUD1-212ENST00000567944 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
HERPUD1-212ENST00000567944 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-212ENST00000567944 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-212ENST00000567944 ZPR1O75312 459 aa8.55□□□□□ -1.04
HERPUD1-212ENST00000567944 NR1I2O75469 434 aa8.55□□□□□ -1.04
HERPUD1-212ENST00000567944 HRCP23327 699 aa8.55□□□□□ -1.04
HERPUD1-212ENST00000567944 KCNC4Q03721 635 aa8.55□□□□□ -1.04
HERPUD1-212ENST00000567944 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
HERPUD1-212ENST00000567944 IL21Q9HBE4 155 aa8.55□□□□□ -1.04
HERPUD1-212ENST00000567944 TLL1O43897 1013 aa8.54□□□□□ -1.04
HERPUD1-212ENST00000567944 PRPF38BQ5VTL8 546 aaKnown RBP8.54□□□□□ -1.04
HERPUD1-212ENST00000567944 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
HERPUD1-212ENST00000567944 TRAF7Q6Q0C0 670 aa8.54□□□□□ -1.04
HERPUD1-212ENST00000567944 NKX2-3Q8TAU0 364 aa8.54□□□□□ -1.04
HERPUD1-212ENST00000567944 GFRA3O60609 400 aa8.53□□□□□ -1.04
HERPUD1-212ENST00000567944 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
HERPUD1-212ENST00000567944 CFAP99D6REC4 459 aa8.52□□□□□ -1.05
HERPUD1-212ENST00000567944 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
HERPUD1-212ENST00000567944 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-212ENST00000567944 MTMR2Q13614 643 aa8.51□□□□□ -1.05
HERPUD1-212ENST00000567944 Q3C1V9 767 aa8.51□□□□□ -1.05
HERPUD1-212ENST00000567944 ZBTB3Q9H5J0 574 aa8.51□□□□□ -1.05
HERPUD1-212ENST00000567944 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
HERPUD1-212ENST00000567944 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
HERPUD1-212ENST00000567944 SPSB2Q99619 263 aa8.5□□□□□ -1.05
HERPUD1-212ENST00000567944 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-212ENST00000567944 RFC5P40937 340 aa8.49□□□□□ -1.05
HERPUD1-212ENST00000567944 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
HERPUD1-212ENST00000567944 ADH1BP00325 375 aa8.48□□□□□ -1.05
HERPUD1-212ENST00000567944 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
HERPUD1-212ENST00000567944 PRDM9Q9NQV7 894 aa8.48□□□□□ -1.05
HERPUD1-212ENST00000567944 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-212ENST00000567944 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-212ENST00000567944 MSS51Q4VC12 460 aa8.47□□□□□ -1.05
HERPUD1-212ENST00000567944 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-212ENST00000567944 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-212ENST00000567944 MMP16P51512 607 aa8.45□□□□□ -1.06
HERPUD1-212ENST00000567944 ATP1B4Q9UN42 357 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-212ENST00000567944 DXOO77932 396 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-212ENST00000567944 S1PR4O95977 384 aa8.44□□□□□ -1.06
HERPUD1-212ENST00000567944 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
HERPUD1-212ENST00000567944 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
HERPUD1-212ENST00000567944 PER1O15534 1290 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-212ENST00000567944 JUNDP17535 347 aa8.43□□□□□ -1.06
HERPUD1-212ENST00000567944 PRKD2Q9BZL6 878 aa8.43□□□□□ -1.06
HERPUD1-212ENST00000567944 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
HERPUD1-212ENST00000567944 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
HERPUD1-212ENST00000567944 AP1G2O75843 785 aa8.41□□□□□ -1.06
HERPUD1-212ENST00000567944 TMEM259Q4ZIN3 620 aa8.41□□□□□ -1.06
HERPUD1-212ENST00000567944 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
HERPUD1-212ENST00000567944 NRG2O14511 850 aaPredicted RBP8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 PPEF1O14829 653 aaPredicted RBP8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 ZNF787Q6DD87 383 aa8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 PPP1R18Q6NYC8 613 aa8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 BANK1Q8NDB2 785 aa8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 LRRN4Q8WUT4 740 aa8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
HERPUD1-212ENST00000567944 RNF223E7ERA6 249 aa8.39□□□□□ -1.07
HERPUD1-212ENST00000567944 USP17L8P0C7I0 530 aa8.39□□□□□ -1.07
HERPUD1-212ENST00000567944 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
HERPUD1-212ENST00000567944 MTMR14Q8NCE2 650 aa8.38□□□□□ -1.07
HERPUD1-212ENST00000567944 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-212ENST00000567944 TSC1Q92574 1164 aa8.38□□□□□ -1.07
HERPUD1-212ENST00000567944 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
HERPUD1-212ENST00000567944 PTPRNQ16849 979 aa8.37□□□□□ -1.07
HERPUD1-212ENST00000567944 PLA2G2CQ5R387 149 aa8.37□□□□□ -1.07
HERPUD1-212ENST00000567944 EMID1Q96A84 441 aaPredicted RBP8.37□□□□□ -1.07
HERPUD1-212ENST00000567944 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-212ENST00000567944 MCM6Q14566 821 aa8.36□□□□□ -1.07
HERPUD1-212ENST00000567944 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-212ENST00000567944 ZNF775Q96BV0 537 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-212ENST00000567944 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-212ENST00000567944 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
HERPUD1-212ENST00000567944 EVA1BQ9NVM1 165 aa8.36□□□□□ -1.07
HERPUD1-212ENST00000567944 EPS8L1Q8TE68 723 aa8.35□□□□□ -1.07
HERPUD1-212ENST00000567944 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
HERPUD1-212ENST00000567944 FCF1Q9Y324 198 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-212ENST00000567944 CCNYL3P0C7X3 344 aa8.34□□□□□ -1.07
HERPUD1-212ENST00000567944 MAP10Q9P2G4 905 aa8.34□□□□□ -1.07
HERPUD1-212ENST00000567944 SOCS7O14512 581 aa8.33□□□□□ -1.08
HERPUD1-212ENST00000567944 GPR37L1O60883 481 aa8.33□□□□□ -1.08
HERPUD1-212ENST00000567944 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
HERPUD1-212ENST00000567944 KCNH2Q12809 1159 aa8.32□□□□□ -1.08
HERPUD1-212ENST00000567944 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
HERPUD1-212ENST00000567944 V9GY48 417 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-212ENST00000567944 GGCXP38435 758 aa8.31□□□□□ -1.08
HERPUD1-212ENST00000567944 NR6A1Q15406 480 aa8.31□□□□□ -1.08
HERPUD1-212ENST00000567944 FLIIQ13045 1269 aa8.3□□□□□ -1.08
HERPUD1-212ENST00000567944 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
HERPUD1-212ENST00000567944 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms