RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 NGLY1Q96IV0 654 aa34.43■■■■□ 3.1
CNEP1R1-209ENST00000567712 RGL3Q3MIN7 710 aa34.42■■■■□ 3.1
CNEP1R1-209ENST00000567712 CDC42BPGQ6DT37 1551 aa34.41■■■■□ 3.1
CNEP1R1-209ENST00000567712 COL22A1Q8NFW1 1626 aaPredicted RBP34.41■■■■□ 3.1
CNEP1R1-209ENST00000567712 WAPLQ7Z5K2 1190 aa34.39■■■■□ 3.1
CNEP1R1-209ENST00000567712 CCDC144AA2RUR9 1427 aa34.38■■■■□ 3.09
CNEP1R1-209ENST00000567712 STK26Q9P289 416 aa34.38■■■■□ 3.09
CNEP1R1-209ENST00000567712 ESCO1Q5FWF5 840 aa34.37■■■■□ 3.09
CNEP1R1-209ENST00000567712 MPHOSPH9Q99550 1183 aa34.37■■■■□ 3.09
CNEP1R1-209ENST00000567712 PXDNQ92626 1479 aa34.36■■■■□ 3.09
CNEP1R1-209ENST00000567712 PLEKHH1Q9ULM0 1364 aa34.36■■■■□ 3.09
CNEP1R1-209ENST00000567712 TMEM132EQ6IEE7 984 aa34.35■■■■□ 3.09
CNEP1R1-209ENST00000567712 TECPR2O15040 1411 aa34.34■■■■□ 3.09
CNEP1R1-209ENST00000567712 XPCQ01831 940 aaPredicted RBP34.34■■■■□ 3.09
CNEP1R1-209ENST00000567712 NUTM2FA1L443 756 aa34.33■■■■□ 3.09
CNEP1R1-209ENST00000567712 USP21Q9UK80 565 aa34.33■■■■□ 3.09
CNEP1R1-209ENST00000567712 MYOM2P54296 1465 aa34.33■■■■□ 3.09
CNEP1R1-209ENST00000567712 LRPPRCP42704 1394 aaKnown RBP34.32■■■■□ 3.08
CNEP1R1-209ENST00000567712 KNDC1Q76NI1 1749 aa34.32■■■■□ 3.08
CNEP1R1-209ENST00000567712 FOXO3O43524 673 aa34.31■■■■□ 3.08
CNEP1R1-209ENST00000567712 FNBP4Q8N3X1 1017 aaPredicted RBP34.31■■■■□ 3.08
CNEP1R1-209ENST00000567712 MARF1Q9Y4F3 1742 aaKnown RBP34.3■■■■□ 3.08
CNEP1R1-209ENST00000567712 PIK3C2GO75747 1445 aa34.3■■■■□ 3.08
CNEP1R1-209ENST00000567712 NPHP3Q7Z494 1330 aa34.3■■■■□ 3.08
CNEP1R1-209ENST00000567712 ANKRD30BQ9BXX2 1392 aa34.29■■■■□ 3.08
CNEP1R1-209ENST00000567712 ABCC11Q96J66 1382 aa34.28■■■■□ 3.08
CNEP1R1-209ENST00000567712 ATRNO75882 1429 aa34.26■■■■□ 3.07
CNEP1R1-209ENST00000567712 FMN2Q9NZ56 1722 aa34.26■■■■□ 3.07
CNEP1R1-209ENST00000567712 TRPC5Q9UL62 973 aaPredicted RBP34.25■■■■□ 3.07
CNEP1R1-209ENST00000567712 RGPD8O14715 1765 aaPredicted RBP34.23■■■■□ 3.07
CNEP1R1-209ENST00000567712 YTHDC2Q9H6S0 1430 aaKnown RBP34.22■■■■□ 3.07
CNEP1R1-209ENST00000567712 BCL9LQ86UU0 1499 aa34.22■■■■□ 3.07
CNEP1R1-209ENST00000567712 C14orf93Q9H972 538 aaKnown RBP34.15■■■■□ 3.06
CNEP1R1-209ENST00000567712 EP400Q96L91 3159 aa34.15■■■■□ 3.06
CNEP1R1-209ENST00000567712 NRXN1Q9ULB1 1477 aa34.14■■■■□ 3.06
CNEP1R1-209ENST00000567712 ATAD2Q6PL18 1390 aa34.13■■■■□ 3.05
CNEP1R1-209ENST00000567712 KIF1AQ12756 1690 aa34.13■■■■□ 3.05
CNEP1R1-209ENST00000567712 CFAP70Q5T0N1 1121 aa34.13■■■■□ 3.05
CNEP1R1-209ENST00000567712 SPATA31A3Q5VYP0 1347 aa34.11■■■■□ 3.05
CNEP1R1-209ENST00000567712 SIRT1Q96EB6 747 aa34.09■■■■□ 3.05
CNEP1R1-209ENST00000567712 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.09■■■■□ 3.05
CNEP1R1-209ENST00000567712 KRT28Q7Z3Y7 464 aa34.07■■■■□ 3.04
CNEP1R1-209ENST00000567712 GJD4Q96KN9 370 aaPredicted RBP34.06■■■■□ 3.04
CNEP1R1-209ENST00000567712 SLIT2O94813 1529 aa34.05■■■■□ 3.04
CNEP1R1-209ENST00000567712 GLI3P10071 1580 aa34.05■■■■□ 3.04
CNEP1R1-209ENST00000567712 SAFB2Q14151 953 aaKnown RBP eCLIP34.04■■■■□ 3.04
CNEP1R1-209ENST00000567712 USP32Q8NFA0 1604 aa34.04■■■■□ 3.04
CNEP1R1-209ENST00000567712 SRCAPQ6ZRS2 3230 aa34.03■■■■□ 3.04
CNEP1R1-209ENST00000567712 DHX57Q6P158 1386 aaKnown RBP34.02■■■■□ 3.04
CNEP1R1-209ENST00000567712 PHF8Q9UPP1 1060 aa34.02■■■■□ 3.04
CNEP1R1-209ENST00000567712 PRAM1Q96QH2 718 aa34.01■■■■□ 3.03
CNEP1R1-209ENST00000567712 UNC5CLQ8IV45 518 aa34■■■■□ 3.03
CNEP1R1-209ENST00000567712 CABLES1Q8TDN4 633 aa34■■■■□ 3.03
CNEP1R1-209ENST00000567712 BRWD3Q6RI45 1802 aa34■■■■□ 3.03
CNEP1R1-209ENST00000567712 RALGAPBQ86X10 1494 aa33.99■■■■□ 3.03
CNEP1R1-209ENST00000567712 TNS3Q68CZ2 1445 aa33.98■■■■□ 3.03
CNEP1R1-209ENST00000567712 ABCA3Q99758 1704 aa33.98■■■■□ 3.03
CNEP1R1-209ENST00000567712 RAB3GAP2Q9H2M9 1393 aa33.98■■■■□ 3.03
CNEP1R1-209ENST00000567712 PLEKHG5O94827 1062 aa33.96■■■■□ 3.03
CNEP1R1-209ENST00000567712 DLC1Q96QB1 1528 aa33.94■■■■□ 3.02
CNEP1R1-209ENST00000567712 ADGRB1O14514 1584 aa33.94■■■■□ 3.02
CNEP1R1-209ENST00000567712 PLCH1Q4KWH8 1693 aa33.93■■■■□ 3.02
CNEP1R1-209ENST00000567712 SBNO1A3KN83 1393 aa33.91■■■■□ 3.02
CNEP1R1-209ENST00000567712 PMFBP1Q8TBY8 1022 aa33.91■■■■□ 3.02
CNEP1R1-209ENST00000567712 PSME1Q06323 249 aa33.9■■■■□ 3.02
CNEP1R1-209ENST00000567712 ADGRB2O60241 1585 aa33.89■■■■□ 3.02
CNEP1R1-209ENST00000567712 ACIN1Q9UKV3 1341 aaKnown RBP33.89■■■■□ 3.02
CNEP1R1-209ENST00000567712 POGKQ9P215 609 aa33.88■■■■□ 3.01
CNEP1R1-209ENST00000567712 TRPM3Q9HCF6 1732 aaPredicted RBP33.87■■■■□ 3.01
CNEP1R1-209ENST00000567712 HIRIP3Q9BW71 556 aaPredicted RBP33.87■■■■□ 3.01
CNEP1R1-209ENST00000567712 NWD2Q9ULI1 1742 aa33.87■■■■□ 3.01
CNEP1R1-209ENST00000567712 LMOD2Q6P5Q4 547 aa33.86■■■■□ 3.01
CNEP1R1-209ENST00000567712 TRAK1Q9UPV9 953 aa33.86■■■■□ 3.01
CNEP1R1-209ENST00000567712 HAP1P54257 671 aaPredicted RBP33.85■■■■□ 3.01
CNEP1R1-209ENST00000567712 ANKARQ7Z5J8 1434 aa33.85■■■■□ 3.01
CNEP1R1-209ENST00000567712 CCDC125Q86Z20 511 aa33.84■■■■□ 3.01
CNEP1R1-209ENST00000567712 PRR36Q9H6K5 1346 aa33.83■■■■□ 3.01
CNEP1R1-209ENST00000567712 VPS72Q15906 364 aa33.83■■■■□ 3.01
CNEP1R1-209ENST00000567712 KDM2AQ9Y2K7 1162 aa33.83■■■■□ 3.01
CNEP1R1-209ENST00000567712 FAM83GA6ND36 823 aa33.82■■■■□ 3
CNEP1R1-209ENST00000567712 SEPT12Q8IYM1 358 aa33.81■■■■□ 3
CNEP1R1-209ENST00000567712 ARHGEF10O15013 1369 aa33.81■■■■□ 3
CNEP1R1-209ENST00000567712 ALS2Q96Q42 1657 aa33.8■■■■□ 3
CNEP1R1-209ENST00000567712 MINK1Q8N4C8 1332 aaPredicted RBP33.8■■■■□ 3
CNEP1R1-209ENST00000567712 ZRANB1Q9UGI0 708 aa33.8■■■■□ 3
CNEP1R1-209ENST00000567712 NRAPQ86VF7 1730 aa33.79■■■■□ 3
CNEP1R1-209ENST00000567712 DCAF11Q8TEB1 546 aa33.78■■■■□ 3
CNEP1R1-209ENST00000567712 BLMP54132 1417 aaPredicted RBP33.77■■■■□ 3
CNEP1R1-209ENST00000567712 ONECUT3O60422 494 aaPredicted RBP33.76■■■□□ 2.99
CNEP1R1-209ENST00000567712 DEFB132Q7Z7B7 95 aa33.75■■■□□ 2.99
CNEP1R1-209ENST00000567712 TULP4Q9NRJ4 1543 aa33.74■■■□□ 2.99
CNEP1R1-209ENST00000567712 CCDC9Q9Y3X0 531 aaKnown RBP33.74■■■□□ 2.99
CNEP1R1-209ENST00000567712 CRYBG1Q9Y4K1 1723 aa33.73■■■□□ 2.99
CNEP1R1-209ENST00000567712 WASLO00401 505 aaPredicted RBP33.72■■■□□ 2.99
CNEP1R1-209ENST00000567712 ARHGEF28Q8N1W1 1705 aaKnown RBP33.71■■■□□ 2.99
CNEP1R1-209ENST00000567712 KRT27Q7Z3Y8 459 aa33.67■■■□□ 2.98
CNEP1R1-209ENST00000567712 BTG4Q9NY30 223 aa33.67■■■□□ 2.98
CNEP1R1-209ENST00000567712 GPRASP1Q5JY77 1395 aa33.67■■■□□ 2.98
CNEP1R1-209ENST00000567712 COL14A1Q05707 1796 aaKnown RBP33.67■■■□□ 2.98
CNEP1R1-209ENST00000567712 EIF3AQ14152 1382 aaKnown RBP33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms