RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 NUTM2AQ8IVF1 878 aaPredicted RBP22.29■■□□□ 1.16
SCAMP2-209ENST00000567638 ORAI2Q96SN7 254 aa22.29■■□□□ 1.16
SCAMP2-209ENST00000567638 ABCC11Q96J66 1382 aa22.28■■□□□ 1.16
SCAMP2-209ENST00000567638 ZNF772Q68DY9 489 aaPredicted RBP22.28■■□□□ 1.16
SCAMP2-209ENST00000567638 STK26Q9P289 416 aa22.28■■□□□ 1.16
SCAMP2-209ENST00000567638 FMN2Q9NZ56 1722 aa22.28■■□□□ 1.16
SCAMP2-209ENST00000567638 YTHDC2Q9H6S0 1430 aaKnown RBP22.27■■□□□ 1.16
SCAMP2-209ENST00000567638 TMEM132EQ6IEE7 984 aa22.26■■□□□ 1.15
SCAMP2-209ENST00000567638 SOS2Q07890 1332 aaPredicted RBP22.26■■□□□ 1.15
SCAMP2-209ENST00000567638 COL22A1Q8NFW1 1626 aaPredicted RBP22.25■■□□□ 1.15
SCAMP2-209ENST00000567638 WAPLQ7Z5K2 1190 aa22.24■■□□□ 1.15
SCAMP2-209ENST00000567638 PLEKHH1Q9ULM0 1364 aa22.24■■□□□ 1.15
SCAMP2-209ENST00000567638 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
SCAMP2-209ENST00000567638 KIF1AQ12756 1690 aa22.22■■□□□ 1.15
SCAMP2-209ENST00000567638 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
SCAMP2-209ENST00000567638 AFF2P51816 1311 aa22.21■■□□□ 1.15
SCAMP2-209ENST00000567638 PXDNQ92626 1479 aa22.21■■□□□ 1.15
SCAMP2-209ENST00000567638 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
SCAMP2-209ENST00000567638 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
SCAMP2-209ENST00000567638 DHX57Q6P158 1386 aaKnown RBP22.18■■□□□ 1.14
SCAMP2-209ENST00000567638 NPHP3Q7Z494 1330 aa22.18■■□□□ 1.14
SCAMP2-209ENST00000567638 CFAP70Q5T0N1 1121 aa22.18■■□□□ 1.14
SCAMP2-209ENST00000567638 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
SCAMP2-209ENST00000567638 C8orf37Q96NL8 207 aa22.17■■□□□ 1.14
SCAMP2-209ENST00000567638 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
SCAMP2-209ENST00000567638 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
SCAMP2-209ENST00000567638 HRCP23327 699 aa22.16■■□□□ 1.14
SCAMP2-209ENST00000567638 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
SCAMP2-209ENST00000567638 RXRBP28702 533 aa22.15■■□□□ 1.14
SCAMP2-209ENST00000567638 NUTM2FA1L443 756 aa22.14■■□□□ 1.13
SCAMP2-209ENST00000567638 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
SCAMP2-209ENST00000567638 FOXO3O43524 673 aa22.12■■□□□ 1.13
SCAMP2-209ENST00000567638 ADAMTS2O95450 1211 aa22.12■■□□□ 1.13
SCAMP2-209ENST00000567638 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
SCAMP2-209ENST00000567638 USP32Q8NFA0 1604 aa22.09■■□□□ 1.13
SCAMP2-209ENST00000567638 NGLY1Q96IV0 654 aa22.09■■□□□ 1.13
SCAMP2-209ENST00000567638 PRAM1Q96QH2 718 aa22.09■■□□□ 1.13
SCAMP2-209ENST00000567638 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
SCAMP2-209ENST00000567638 QTRT2Q9H974 415 aaKnown RBP22.07■■□□□ 1.12
SCAMP2-209ENST00000567638 RGS12O14924 1447 aa22.06■■□□□ 1.12
SCAMP2-209ENST00000567638 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
SCAMP2-209ENST00000567638 RBM6P78332 1123 aaKnown RBP22.06■■□□□ 1.12
SCAMP2-209ENST00000567638 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
SCAMP2-209ENST00000567638 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
SCAMP2-209ENST00000567638 STAC3Q96MF2 364 aa22.05■■□□□ 1.12
SCAMP2-209ENST00000567638 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.04■■□□□ 1.12
SCAMP2-209ENST00000567638 POGKQ9P215 609 aa22.04■■□□□ 1.12
SCAMP2-209ENST00000567638 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
SCAMP2-209ENST00000567638 ABCA3Q99758 1704 aa22.03■■□□□ 1.12
SCAMP2-209ENST00000567638 FNBP4Q8N3X1 1017 aaPredicted RBP22.03■■□□□ 1.12
SCAMP2-209ENST00000567638 USP21Q9UK80 565 aa22.03■■□□□ 1.12
SCAMP2-209ENST00000567638 PHF8Q9UPP1 1060 aa22.03■■□□□ 1.12
SCAMP2-209ENST00000567638 SPATA31A3Q5VYP0 1347 aa22.03■■□□□ 1.12
SCAMP2-209ENST00000567638 TRAK1Q9UPV9 953 aa22.02■■□□□ 1.12
SCAMP2-209ENST00000567638 KIAA1210Q9ULL0 1709 aa22.02■■□□□ 1.12
SCAMP2-209ENST00000567638 TNS3Q68CZ2 1445 aa22.01■■□□□ 1.11
SCAMP2-209ENST00000567638 KRT28Q7Z3Y7 464 aa22.01■■□□□ 1.11
SCAMP2-209ENST00000567638 UPF1Q92900 1129 aaKnown RBP eCLIP22.01■■□□□ 1.11
SCAMP2-209ENST00000567638 ATRNO75882 1429 aa22■■□□□ 1.11
SCAMP2-209ENST00000567638 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
SCAMP2-209ENST00000567638 TRPM3Q9HCF6 1732 aaPredicted RBP21.99■■□□□ 1.11
SCAMP2-209ENST00000567638 TULP4Q9NRJ4 1543 aa21.99■■□□□ 1.11
SCAMP2-209ENST00000567638 BCL9LQ86UU0 1499 aa21.98■■□□□ 1.11
SCAMP2-209ENST00000567638 ITSN1Q15811 1721 aa21.98■■□□□ 1.11
SCAMP2-209ENST00000567638 SBNO1A3KN83 1393 aa21.97■■□□□ 1.11
SCAMP2-209ENST00000567638 EIF3AQ14152 1382 aaKnown RBP21.97■■□□□ 1.11
SCAMP2-209ENST00000567638 PLCH1Q4KWH8 1693 aa21.96■■□□□ 1.11
SCAMP2-209ENST00000567638 PSME1Q06323 249 aa21.96■■□□□ 1.11
SCAMP2-209ENST00000567638 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
SCAMP2-209ENST00000567638 MINK1Q8N4C8 1332 aaPredicted RBP21.96■■□□□ 1.11
SCAMP2-209ENST00000567638 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
SCAMP2-209ENST00000567638 SLIT2O94813 1529 aa21.94■■□□□ 1.1
SCAMP2-209ENST00000567638 NWD2Q9ULI1 1742 aa21.94■■□□□ 1.1
SCAMP2-209ENST00000567638 ARHGEF10O15013 1369 aa21.92■■□□□ 1.1
SCAMP2-209ENST00000567638 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
SCAMP2-209ENST00000567638 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
SCAMP2-209ENST00000567638 WASLO00401 505 aaPredicted RBP21.91■■□□□ 1.1
SCAMP2-209ENST00000567638 CRYBG1Q9Y4K1 1723 aa21.89■■□□□ 1.1
SCAMP2-209ENST00000567638 TOPAZ1Q8N9V7 1692 aa21.89■■□□□ 1.1
SCAMP2-209ENST00000567638 GLI3P10071 1580 aa21.89■■□□□ 1.09
SCAMP2-209ENST00000567638 ATP7BP35670 1465 aa21.89■■□□□ 1.09
SCAMP2-209ENST00000567638 ATAD2Q6PL18 1390 aa21.88■■□□□ 1.09
SCAMP2-209ENST00000567638 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
SCAMP2-209ENST00000567638 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
SCAMP2-209ENST00000567638 LMOD2Q6P5Q4 547 aa21.87■■□□□ 1.09
SCAMP2-209ENST00000567638 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
SCAMP2-209ENST00000567638 UNC5CLQ8IV45 518 aa21.86■■□□□ 1.09
SCAMP2-209ENST00000567638 GJD4Q96KN9 370 aaPredicted RBP21.86■■□□□ 1.09
SCAMP2-209ENST00000567638 BRWD3Q6RI45 1802 aa21.85■■□□□ 1.09
SCAMP2-209ENST00000567638 RALGAPBQ86X10 1494 aa21.85■■□□□ 1.09
SCAMP2-209ENST00000567638 NRAPQ86VF7 1730 aa21.85■■□□□ 1.09
SCAMP2-209ENST00000567638 PLEKHG5O94827 1062 aa21.84■■□□□ 1.09
SCAMP2-209ENST00000567638 COL14A1Q05707 1796 aaKnown RBP21.82■■□□□ 1.08
SCAMP2-209ENST00000567638 QRICH2Q9H0J4 1663 aa21.82■■□□□ 1.08
SCAMP2-209ENST00000567638 NGDNQ8NEJ9 315 aaKnown RBP21.81■■□□□ 1.08
SCAMP2-209ENST00000567638 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
SCAMP2-209ENST00000567638 NUDT16Q96DE0 195 aaKnown RBP21.8■■□□□ 1.08
SCAMP2-209ENST00000567638 PHRF1Q9P1Y6 1649 aaKnown RBP21.8■■□□□ 1.08
SCAMP2-209ENST00000567638 TRPM1Q7Z4N2 1603 aa21.79■■□□□ 1.08
SCAMP2-209ENST00000567638 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms