RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 CFAP70Q5T0N1 1121 aa11.1□□□□□ -0.63
GINS3-207ENST00000567400 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
GINS3-207ENST00000567400 ORAI2Q96SN7 254 aa11.1□□□□□ -0.63
GINS3-207ENST00000567400 STK26Q9P289 416 aa11.1□□□□□ -0.63
GINS3-207ENST00000567400 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
GINS3-207ENST00000567400 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
GINS3-207ENST00000567400 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
GINS3-207ENST00000567400 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
GINS3-207ENST00000567400 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
GINS3-207ENST00000567400 DLC1Q96QB1 1528 aa11.07□□□□□ -0.64
GINS3-207ENST00000567400 SOS2Q07890 1332 aaPredicted RBP11.07□□□□□ -0.64
GINS3-207ENST00000567400 PXDNQ92626 1479 aa11.06□□□□□ -0.64
GINS3-207ENST00000567400 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
GINS3-207ENST00000567400 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
GINS3-207ENST00000567400 ADGRB2O60241 1585 aa11.04□□□□□ -0.64
GINS3-207ENST00000567400 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
GINS3-207ENST00000567400 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
GINS3-207ENST00000567400 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
GINS3-207ENST00000567400 USP32Q8NFA0 1604 aa11.04□□□□□ -0.64
GINS3-207ENST00000567400 COL22A1Q8NFW1 1626 aaPredicted RBP11.04□□□□□ -0.64
GINS3-207ENST00000567400 RGPD8O14715 1765 aaPredicted RBP11.03□□□□□ -0.64
GINS3-207ENST00000567400 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
GINS3-207ENST00000567400 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
GINS3-207ENST00000567400 ESCO1Q5FWF5 840 aa11.03□□□□□ -0.64
GINS3-207ENST00000567400 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
GINS3-207ENST00000567400 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
GINS3-207ENST00000567400 KIF1AQ12756 1690 aa11.02□□□□□ -0.64
GINS3-207ENST00000567400 ARHGEF28Q8N1W1 1705 aaKnown RBP11.02□□□□□ -0.65
GINS3-207ENST00000567400 FOXO3O43524 673 aa11.01□□□□□ -0.65
GINS3-207ENST00000567400 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
GINS3-207ENST00000567400 SAFB2Q14151 953 aaKnown RBP eCLIP11.01□□□□□ -0.65
GINS3-207ENST00000567400 NPHP3Q7Z494 1330 aa11.01□□□□□ -0.65
GINS3-207ENST00000567400 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
GINS3-207ENST00000567400 STAC3Q96MF2 364 aa11□□□□□ -0.65
GINS3-207ENST00000567400 TRAK1Q9UPV9 953 aa11□□□□□ -0.65
GINS3-207ENST00000567400 KIAA1210Q9ULL0 1709 aa11□□□□□ -0.65
GINS3-207ENST00000567400 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
GINS3-207ENST00000567400 AFF2P51816 1311 aa10.98□□□□□ -0.65
GINS3-207ENST00000567400 ANKARQ7Z5J8 1434 aa10.98□□□□□ -0.65
GINS3-207ENST00000567400 ZNF772Q68DY9 489 aaPredicted RBP10.97□□□□□ -0.65
GINS3-207ENST00000567400 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
GINS3-207ENST00000567400 POGKQ9P215 609 aa10.97□□□□□ -0.65
GINS3-207ENST00000567400 PRR36Q9H6K5 1346 aa10.97□□□□□ -0.65
GINS3-207ENST00000567400 TULP4Q9NRJ4 1543 aa10.97□□□□□ -0.65
GINS3-207ENST00000567400 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
GINS3-207ENST00000567400 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
GINS3-207ENST00000567400 ADAMTS2O95450 1211 aa10.96□□□□□ -0.65
GINS3-207ENST00000567400 ABCA3Q99758 1704 aa10.95□□□□□ -0.66
GINS3-207ENST00000567400 TRPM3Q9HCF6 1732 aaPredicted RBP10.95□□□□□ -0.66
GINS3-207ENST00000567400 SPATA31A3Q5VYP0 1347 aa10.95□□□□□ -0.66
GINS3-207ENST00000567400 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
GINS3-207ENST00000567400 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
GINS3-207ENST00000567400 ATP7BP35670 1465 aa10.94□□□□□ -0.66
GINS3-207ENST00000567400 TNS3Q68CZ2 1445 aa10.94□□□□□ -0.66
GINS3-207ENST00000567400 L3MBTL2Q969R5 705 aa10.94□□□□□ -0.66
GINS3-207ENST00000567400 SIN3AQ96ST3 1273 aa10.94□□□□□ -0.66
GINS3-207ENST00000567400 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
GINS3-207ENST00000567400 RGS12O14924 1447 aa10.93□□□□□ -0.66
GINS3-207ENST00000567400 TOPAZ1Q8N9V7 1692 aa10.93□□□□□ -0.66
GINS3-207ENST00000567400 WASLO00401 505 aaPredicted RBP10.93□□□□□ -0.66
GINS3-207ENST00000567400 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
GINS3-207ENST00000567400 TRPM1Q7Z4N2 1603 aa10.93□□□□□ -0.66
GINS3-207ENST00000567400 BCL9LQ86UU0 1499 aa10.93□□□□□ -0.66
GINS3-207ENST00000567400 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
GINS3-207ENST00000567400 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
GINS3-207ENST00000567400 RXRBP28702 533 aa10.92□□□□□ -0.66
GINS3-207ENST00000567400 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
GINS3-207ENST00000567400 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
GINS3-207ENST00000567400 NGLY1Q96IV0 654 aa10.92□□□□□ -0.66
GINS3-207ENST00000567400 ATRNO75882 1429 aa10.92□□□□□ -0.66
GINS3-207ENST00000567400 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
GINS3-207ENST00000567400 CRYBG1Q9Y4K1 1723 aa10.91□□□□□ -0.66
GINS3-207ENST00000567400 EP400Q96L91 3159 aa10.91□□□□□ -0.66
GINS3-207ENST00000567400 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.66
GINS3-207ENST00000567400 SLIT2O94813 1529 aa10.9□□□□□ -0.66
GINS3-207ENST00000567400 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.9□□□□□ -0.66
GINS3-207ENST00000567400 QRICH2Q9H0J4 1663 aa10.9□□□□□ -0.66
GINS3-207ENST00000567400 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.66
GINS3-207ENST00000567400 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
GINS3-207ENST00000567400 USP21Q9UK80 565 aa10.89□□□□□ -0.67
GINS3-207ENST00000567400 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
GINS3-207ENST00000567400 PLCH1Q4KWH8 1693 aa10.89□□□□□ -0.67
GINS3-207ENST00000567400 RBM6P78332 1123 aaKnown RBP10.88□□□□□ -0.67
GINS3-207ENST00000567400 PSME1Q06323 249 aa10.88□□□□□ -0.67
GINS3-207ENST00000567400 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
GINS3-207ENST00000567400 GLI3P10071 1580 aa10.87□□□□□ -0.67
GINS3-207ENST00000567400 NUDT16Q96DE0 195 aaKnown RBP10.87□□□□□ -0.67
GINS3-207ENST00000567400 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
GINS3-207ENST00000567400 POLR3AO14802 1390 aaPredicted RBP10.87□□□□□ -0.67
GINS3-207ENST00000567400 CENPJQ9HC77 1338 aaPredicted RBP10.86□□□□□ -0.67
GINS3-207ENST00000567400 NBPF8Q3BBV2 869 aa10.86□□□□□ -0.67
GINS3-207ENST00000567400 TRPC5Q9UL62 973 aaPredicted RBP10.86□□□□□ -0.67
GINS3-207ENST00000567400 GPRASP1Q5JY77 1395 aa10.86□□□□□ -0.67
GINS3-207ENST00000567400 NWD2Q9ULI1 1742 aa10.86□□□□□ -0.67
GINS3-207ENST00000567400 NRAPQ86VF7 1730 aa10.85□□□□□ -0.67
GINS3-207ENST00000567400 TRIM26Q12899 539 aaPredicted RBP10.85□□□□□ -0.67
GINS3-207ENST00000567400 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
GINS3-207ENST00000567400 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
GINS3-207ENST00000567400 RALGAPBQ86X10 1494 aa10.85□□□□□ -0.67
GINS3-207ENST00000567400 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms