RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 MYOM2P54296 1465 aa17.11■□□□□ 0.33
SPG7-216ENST00000567138 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
SPG7-216ENST00000567138 EP400Q96L91 3159 aa17.1■□□□□ 0.33
SPG7-216ENST00000567138 PXDNQ92626 1479 aa17.1■□□□□ 0.33
SPG7-216ENST00000567138 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
SPG7-216ENST00000567138 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.33
SPG7-216ENST00000567138 BRWD3Q6RI45 1802 aa17.08■□□□□ 0.33
SPG7-216ENST00000567138 NAIPQ13075 1403 aa17.08■□□□□ 0.33
SPG7-216ENST00000567138 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.32
SPG7-216ENST00000567138 FNBP4Q8N3X1 1017 aaPredicted RBP17.08■□□□□ 0.32
SPG7-216ENST00000567138 BCL9LQ86UU0 1499 aa17.06■□□□□ 0.32
SPG7-216ENST00000567138 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
SPG7-216ENST00000567138 XPCQ01831 940 aaPredicted RBP17.05■□□□□ 0.32
SPG7-216ENST00000567138 KNDC1Q76NI1 1749 aa17.05■□□□□ 0.32
SPG7-216ENST00000567138 FMN2Q9NZ56 1722 aa17.05■□□□□ 0.32
SPG7-216ENST00000567138 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
SPG7-216ENST00000567138 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
SPG7-216ENST00000567138 GLI3P10071 1580 aa17.04■□□□□ 0.32
SPG7-216ENST00000567138 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
SPG7-216ENST00000567138 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
SPG7-216ENST00000567138 KIF1AQ12756 1690 aa17.02■□□□□ 0.32
SPG7-216ENST00000567138 RPGRIP1LQ68CZ1 1315 aa17.02■□□□□ 0.32
SPG7-216ENST00000567138 USP32Q8NFA0 1604 aa17.02■□□□□ 0.31
SPG7-216ENST00000567138 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
SPG7-216ENST00000567138 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
SPG7-216ENST00000567138 FOXO3O43524 673 aa17.01■□□□□ 0.31
SPG7-216ENST00000567138 ABCA3Q99758 1704 aa17■□□□□ 0.31
SPG7-216ENST00000567138 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
SPG7-216ENST00000567138 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
SPG7-216ENST00000567138 FOXD1Q16676 465 aa16.99■□□□□ 0.31
SPG7-216ENST00000567138 GJD4Q96KN9 370 aaPredicted RBP16.99■□□□□ 0.31
SPG7-216ENST00000567138 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
SPG7-216ENST00000567138 STK26Q9P289 416 aa16.98■□□□□ 0.31
SPG7-216ENST00000567138 SLIT2O94813 1529 aa16.98■□□□□ 0.31
SPG7-216ENST00000567138 TECPR2O15040 1411 aa16.97■□□□□ 0.31
SPG7-216ENST00000567138 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
SPG7-216ENST00000567138 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
SPG7-216ENST00000567138 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
SPG7-216ENST00000567138 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.31
SPG7-216ENST00000567138 CCDC125Q86Z20 511 aa16.96■□□□□ 0.31
SPG7-216ENST00000567138 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.3
SPG7-216ENST00000567138 BLMP54132 1417 aaPredicted RBP16.94■□□□□ 0.3
SPG7-216ENST00000567138 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
SPG7-216ENST00000567138 CCDC144AA2RUR9 1427 aa16.93■□□□□ 0.3
SPG7-216ENST00000567138 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
SPG7-216ENST00000567138 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
SPG7-216ENST00000567138 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
SPG7-216ENST00000567138 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
SPG7-216ENST00000567138 DEFB132Q7Z7B7 95 aa16.91■□□□□ 0.3
SPG7-216ENST00000567138 TNS3Q68CZ2 1445 aa16.91■□□□□ 0.3
SPG7-216ENST00000567138 LRP5O75197 1615 aa16.91■□□□□ 0.3
SPG7-216ENST00000567138 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
SPG7-216ENST00000567138 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
SPG7-216ENST00000567138 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
SPG7-216ENST00000567138 YTHDC2Q9H6S0 1430 aaKnown RBP16.9■□□□□ 0.3
SPG7-216ENST00000567138 NRAPQ86VF7 1730 aa16.89■□□□□ 0.3
SPG7-216ENST00000567138 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
SPG7-216ENST00000567138 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
SPG7-216ENST00000567138 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.29
SPG7-216ENST00000567138 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
SPG7-216ENST00000567138 SEPT12Q8IYM1 358 aa16.87■□□□□ 0.29
SPG7-216ENST00000567138 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
SPG7-216ENST00000567138 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
SPG7-216ENST00000567138 TRPM3Q9HCF6 1732 aaPredicted RBP16.85■□□□□ 0.29
SPG7-216ENST00000567138 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
SPG7-216ENST00000567138 RGPD1P0DJD0 1748 aa16.84■□□□□ 0.29
SPG7-216ENST00000567138 VPS72Q15906 364 aa16.84■□□□□ 0.29
SPG7-216ENST00000567138 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
SPG7-216ENST00000567138 LMOD2Q6P5Q4 547 aa16.83■□□□□ 0.28
SPG7-216ENST00000567138 ALS2Q96Q42 1657 aa16.82■□□□□ 0.28
SPG7-216ENST00000567138 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
SPG7-216ENST00000567138 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
SPG7-216ENST00000567138 COL14A1Q05707 1796 aaKnown RBP16.81■□□□□ 0.28
SPG7-216ENST00000567138 A0A0G2JS52 829 aa16.81■□□□□ 0.28
SPG7-216ENST00000567138 MYT1Q01538 1121 aa16.81■□□□□ 0.28
SPG7-216ENST00000567138 PSME1Q06323 249 aa16.81■□□□□ 0.28
SPG7-216ENST00000567138 SAFB2Q14151 953 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPG7-216ENST00000567138 KRT27Q7Z3Y8 459 aa16.81■□□□□ 0.28
SPG7-216ENST00000567138 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
SPG7-216ENST00000567138 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
SPG7-216ENST00000567138 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
SPG7-216ENST00000567138 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
SPG7-216ENST00000567138 MPHOSPH9Q99550 1183 aa16.78■□□□□ 0.28
SPG7-216ENST00000567138 DHX57Q6P158 1386 aaKnown RBP16.78■□□□□ 0.28
SPG7-216ENST00000567138 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
SPG7-216ENST00000567138 CFAP70Q5T0N1 1121 aa16.77■□□□□ 0.28
SPG7-216ENST00000567138 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
SPG7-216ENST00000567138 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
SPG7-216ENST00000567138 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
SPG7-216ENST00000567138 DLC1Q96QB1 1528 aa16.77■□□□□ 0.27
SPG7-216ENST00000567138 FAM83GA6ND36 823 aa16.77■□□□□ 0.27
SPG7-216ENST00000567138 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.27
SPG7-216ENST00000567138 ANKARQ7Z5J8 1434 aa16.76■□□□□ 0.27
SPG7-216ENST00000567138 THSD7AQ9UPZ6 1657 aa16.76■□□□□ 0.27
SPG7-216ENST00000567138 BAG6P46379 1132 aa16.76■□□□□ 0.27
SPG7-216ENST00000567138 FAM98CQ17RN3 349 aaKnown RBP16.76■□□□□ 0.27
SPG7-216ENST00000567138 BTG4Q9NY30 223 aa16.74■□□□□ 0.27
SPG7-216ENST00000567138 HRCP23327 699 aa16.73■□□□□ 0.27
SPG7-216ENST00000567138 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
SPG7-216ENST00000567138 POGKQ9P215 609 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms