RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 ALKQ9UM73 1620 aa13.55□□□□□ -0.24
CCNDBP1-210ENST00000566882 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
CCNDBP1-210ENST00000566882 PTPRMP28827 1452 aa13.54□□□□□ -0.24
CCNDBP1-210ENST00000566882 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
CCNDBP1-210ENST00000566882 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
CCNDBP1-210ENST00000566882 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
CCNDBP1-210ENST00000566882 YTHDC2Q9H6S0 1430 aaKnown RBP13.53□□□□□ -0.24
CCNDBP1-210ENST00000566882 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
CCNDBP1-210ENST00000566882 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
CCNDBP1-210ENST00000566882 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.24
CCNDBP1-210ENST00000566882 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.25
CCNDBP1-210ENST00000566882 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
CCNDBP1-210ENST00000566882 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
CCNDBP1-210ENST00000566882 POGKQ9P215 609 aa13.52□□□□□ -0.25
CCNDBP1-210ENST00000566882 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
CCNDBP1-210ENST00000566882 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
CCNDBP1-210ENST00000566882 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
CCNDBP1-210ENST00000566882 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
CCNDBP1-210ENST00000566882 ESF1Q9H501 851 aaKnown RBP13.5□□□□□ -0.25
CCNDBP1-210ENST00000566882 PLIN1O60240 522 aa13.5□□□□□ -0.25
CCNDBP1-210ENST00000566882 APAF1O14727 1248 aa13.49□□□□□ -0.25
CCNDBP1-210ENST00000566882 ERICH6BQ5W0A0 696 aa13.49□□□□□ -0.25
CCNDBP1-210ENST00000566882 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 INSRP06213 1382 aa13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 ANKRD36BQ8N2N9 1353 aa13.48□□□□□ -0.25
CCNDBP1-210ENST00000566882 SETD1AO15047 1707 aaKnown RBP13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 METP08581 1390 aa13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 MTHFSP49914 203 aa13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 EXOC6Q8TAG9 804 aa13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 NRXN3Q9Y4C0 1643 aa13.47□□□□□ -0.25
CCNDBP1-210ENST00000566882 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
CCNDBP1-210ENST00000566882 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
CCNDBP1-210ENST00000566882 SHPRHQ149N8 1683 aa13.46□□□□□ -0.25
CCNDBP1-210ENST00000566882 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.26
CCNDBP1-210ENST00000566882 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
CCNDBP1-210ENST00000566882 CABP1Q9NZU7 370 aa13.45□□□□□ -0.26
CCNDBP1-210ENST00000566882 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
CCNDBP1-210ENST00000566882 TNRQ92752 1358 aa13.44□□□□□ -0.26
CCNDBP1-210ENST00000566882 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
CCNDBP1-210ENST00000566882 POLR3AO14802 1390 aaPredicted RBP13.44□□□□□ -0.26
CCNDBP1-210ENST00000566882 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
CCNDBP1-210ENST00000566882 FBLN1P23142 703 aa13.43□□□□□ -0.26
CCNDBP1-210ENST00000566882 PUS7Q96PZ0 661 aaKnown RBP13.43□□□□□ -0.26
CCNDBP1-210ENST00000566882 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
CCNDBP1-210ENST00000566882 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
CCNDBP1-210ENST00000566882 C20orf194Q5TEA3 1177 aa13.42□□□□□ -0.26
CCNDBP1-210ENST00000566882 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
CCNDBP1-210ENST00000566882 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
CCNDBP1-210ENST00000566882 FYB1O15117 783 aa13.41□□□□□ -0.26
CCNDBP1-210ENST00000566882 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
CCNDBP1-210ENST00000566882 LTKP29376 864 aa13.41□□□□□ -0.26
CCNDBP1-210ENST00000566882 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
CCNDBP1-210ENST00000566882 UBR1Q8IWV7 1749 aa13.4□□□□□ -0.26
CCNDBP1-210ENST00000566882 SLFN5Q08AF3 891 aa13.4□□□□□ -0.26
CCNDBP1-210ENST00000566882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCNDBP1-210ENST00000566882 MSH5O43196 834 aa13.4□□□□□ -0.27
CCNDBP1-210ENST00000566882 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
CCNDBP1-210ENST00000566882 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
CCNDBP1-210ENST00000566882 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
CCNDBP1-210ENST00000566882 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
CCNDBP1-210ENST00000566882 CRBNQ96SW2 442 aa13.38□□□□□ -0.27
CCNDBP1-210ENST00000566882 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
CCNDBP1-210ENST00000566882 TRMT2AQ8IZ69 625 aaKnown RBP13.37□□□□□ -0.27
CCNDBP1-210ENST00000566882 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
CCNDBP1-210ENST00000566882 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCNDBP1-210ENST00000566882 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
CCNDBP1-210ENST00000566882 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
CCNDBP1-210ENST00000566882 DLC1Q96QB1 1528 aa13.37□□□□□ -0.27
CCNDBP1-210ENST00000566882 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
CCNDBP1-210ENST00000566882 NUTM2FA1L443 756 aa13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 NSD2O96028 1365 aa13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 ROBO2Q9HCK4 1378 aa13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 NINLQ9Y2I6 1382 aa13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 C3P01024 1663 aa13.35□□□□□ -0.27
CCNDBP1-210ENST00000566882 BCAR3O75815 825 aa13.34□□□□□ -0.27
CCNDBP1-210ENST00000566882 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
CCNDBP1-210ENST00000566882 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
CCNDBP1-210ENST00000566882 CFAP53Q96M91 514 aa13.34□□□□□ -0.27
CCNDBP1-210ENST00000566882 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.27
CCNDBP1-210ENST00000566882 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.28
CCNDBP1-210ENST00000566882 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
CCNDBP1-210ENST00000566882 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
CCNDBP1-210ENST00000566882 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.28
CCNDBP1-210ENST00000566882 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
CCNDBP1-210ENST00000566882 ANKRD26Q9UPS8 1709 aa13.32□□□□□ -0.28
CCNDBP1-210ENST00000566882 NME9Q86XW9 330 aa13.32□□□□□ -0.28
CCNDBP1-210ENST00000566882 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
CCNDBP1-210ENST00000566882 KIF20BQ96Q89 1820 aa13.32□□□□□ -0.28
CCNDBP1-210ENST00000566882 FER1L4A9Z1Z3 1794 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms