RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 RRBP1Q9P2E9 1410 aaKnown RBP24.54■■□□□ 1.52
EDC3-212ENST00000566828 PXDNQ92626 1479 aa24.53■■□□□ 1.52
EDC3-212ENST00000566828 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
EDC3-212ENST00000566828 TRPC5Q9UL62 973 aaPredicted RBP24.52■■□□□ 1.52
EDC3-212ENST00000566828 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.52■■□□□ 1.52
EDC3-212ENST00000566828 IFT172Q9UG01 1749 aa24.52■■□□□ 1.52
EDC3-212ENST00000566828 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
EDC3-212ENST00000566828 EP400Q96L91 3159 aa24.49■■□□□ 1.51
EDC3-212ENST00000566828 FNBP4Q8N3X1 1017 aaPredicted RBP24.48■■□□□ 1.51
EDC3-212ENST00000566828 FMN2Q9NZ56 1722 aa24.47■■□□□ 1.51
EDC3-212ENST00000566828 BCL9LQ86UU0 1499 aa24.46■■□□□ 1.51
EDC3-212ENST00000566828 RPGRIP1LQ68CZ1 1315 aa24.46■■□□□ 1.51
EDC3-212ENST00000566828 NPHP3Q7Z494 1330 aa24.46■■□□□ 1.51
EDC3-212ENST00000566828 KIF1AQ12756 1690 aa24.45■■□□□ 1.5
EDC3-212ENST00000566828 XPCQ01831 940 aaPredicted RBP24.44■■□□□ 1.5
EDC3-212ENST00000566828 ESCO1Q5FWF5 840 aa24.44■■□□□ 1.5
EDC3-212ENST00000566828 GLI3P10071 1580 aa24.42■■□□□ 1.5
EDC3-212ENST00000566828 SRCAPQ6ZRS2 3230 aa24.42■■□□□ 1.5
EDC3-212ENST00000566828 USP32Q8NFA0 1604 aa24.42■■□□□ 1.5
EDC3-212ENST00000566828 BRWD3Q6RI45 1802 aa24.42■■□□□ 1.5
EDC3-212ENST00000566828 SLC4A1APQ9BWU0 796 aaKnown RBP24.41■■□□□ 1.5
EDC3-212ENST00000566828 TECPR2O15040 1411 aa24.41■■□□□ 1.5
EDC3-212ENST00000566828 RGPD8O14715 1765 aaPredicted RBP24.4■■□□□ 1.5
EDC3-212ENST00000566828 ABCA3Q99758 1704 aa24.39■■□□□ 1.5
EDC3-212ENST00000566828 FOXO3O43524 673 aa24.39■■□□□ 1.49
EDC3-212ENST00000566828 PLCH1Q4KWH8 1693 aa24.38■■□□□ 1.49
EDC3-212ENST00000566828 NUTM2FA1L443 756 aa24.38■■□□□ 1.49
EDC3-212ENST00000566828 ADGRF5Q8IZF2 1346 aa24.37■■□□□ 1.49
EDC3-212ENST00000566828 FOXD1Q16676 465 aa24.36■■□□□ 1.49
EDC3-212ENST00000566828 ZRANB1Q9UGI0 708 aa24.36■■□□□ 1.49
EDC3-212ENST00000566828 LRPPRCP42704 1394 aaKnown RBP24.36■■□□□ 1.49
EDC3-212ENST00000566828 PLEKHH1Q9ULM0 1364 aa24.36■■□□□ 1.49
EDC3-212ENST00000566828 CCDC144AA2RUR9 1427 aa24.35■■□□□ 1.49
EDC3-212ENST00000566828 RALGAPBQ86X10 1494 aa24.35■■□□□ 1.49
EDC3-212ENST00000566828 STK26Q9P289 416 aa24.35■■□□□ 1.49
EDC3-212ENST00000566828 SLIT2O94813 1529 aa24.35■■□□□ 1.49
EDC3-212ENST00000566828 WAPLQ7Z5K2 1190 aa24.34■■□□□ 1.49
EDC3-212ENST00000566828 GJD4Q96KN9 370 aaPredicted RBP24.34■■□□□ 1.49
EDC3-212ENST00000566828 SPATA31E1Q6ZUB1 1445 aa24.34■■□□□ 1.49
EDC3-212ENST00000566828 PIK3C2GO75747 1445 aa24.32■■□□□ 1.48
EDC3-212ENST00000566828 NWD2Q9ULI1 1742 aa24.31■■□□□ 1.48
EDC3-212ENST00000566828 RGL3Q3MIN7 710 aa24.29■■□□□ 1.48
EDC3-212ENST00000566828 CCDC125Q86Z20 511 aa24.29■■□□□ 1.48
EDC3-212ENST00000566828 SPATA31A3Q5VYP0 1347 aa24.29■■□□□ 1.48
EDC3-212ENST00000566828 ABCC11Q96J66 1382 aa24.29■■□□□ 1.48
EDC3-212ENST00000566828 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
EDC3-212ENST00000566828 YTHDC2Q9H6S0 1430 aaKnown RBP24.28■■□□□ 1.48
EDC3-212ENST00000566828 TMEM132EQ6IEE7 984 aa24.28■■□□□ 1.48
EDC3-212ENST00000566828 BLMP54132 1417 aaPredicted RBP24.27■■□□□ 1.48
EDC3-212ENST00000566828 UNC5CLQ8IV45 518 aa24.27■■□□□ 1.48
EDC3-212ENST00000566828 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
EDC3-212ENST00000566828 NRAPQ86VF7 1730 aa24.23■■□□□ 1.47
EDC3-212ENST00000566828 PLEKHG5O94827 1062 aa24.21■■□□□ 1.47
EDC3-212ENST00000566828 KRT28Q7Z3Y7 464 aa24.21■■□□□ 1.47
EDC3-212ENST00000566828 LRP5O75197 1615 aa24.21■■□□□ 1.47
EDC3-212ENST00000566828 NRXN1Q9ULB1 1477 aa24.2■■□□□ 1.47
EDC3-212ENST00000566828 HAP1P54257 671 aaPredicted RBP24.2■■□□□ 1.46
EDC3-212ENST00000566828 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
EDC3-212ENST00000566828 TRPM3Q9HCF6 1732 aaPredicted RBP24.18■■□□□ 1.46
EDC3-212ENST00000566828 CABLES1Q8TDN4 633 aa24.18■■□□□ 1.46
EDC3-212ENST00000566828 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
EDC3-212ENST00000566828 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
EDC3-212ENST00000566828 SEPT12Q8IYM1 358 aa24.16■■□□□ 1.46
EDC3-212ENST00000566828 MPHOSPH9Q99550 1183 aa24.15■■□□□ 1.46
EDC3-212ENST00000566828 ALS2Q96Q42 1657 aa24.15■■□□□ 1.46
EDC3-212ENST00000566828 VPS72Q15906 364 aa24.14■■□□□ 1.45
EDC3-212ENST00000566828 CCDC9Q9Y3X0 531 aaKnown RBP24.14■■□□□ 1.45
EDC3-212ENST00000566828 SBNO1A3KN83 1393 aa24.14■■□□□ 1.45
EDC3-212ENST00000566828 ARHGEF10O15013 1369 aa24.13■■□□□ 1.45
EDC3-212ENST00000566828 CRYBG1Q9Y4K1 1723 aa24.13■■□□□ 1.45
EDC3-212ENST00000566828 DLC1Q96QB1 1528 aa24.12■■□□□ 1.45
EDC3-212ENST00000566828 SF3B2Q13435 895 aaKnown RBP24.12■■□□□ 1.45
EDC3-212ENST00000566828 SAFB2Q14151 953 aaKnown RBP eCLIP24.12■■□□□ 1.45
EDC3-212ENST00000566828 LMOD2Q6P5Q4 547 aa24.12■■□□□ 1.45
EDC3-212ENST00000566828 RGPD1P0DJD0 1748 aa24.12■■□□□ 1.45
EDC3-212ENST00000566828 COL14A1Q05707 1796 aaKnown RBP24.11■■□□□ 1.45
EDC3-212ENST00000566828 PSME1Q06323 249 aa24.11■■□□□ 1.45
EDC3-212ENST00000566828 DHX57Q6P158 1386 aaKnown RBP24.1■■□□□ 1.45
EDC3-212ENST00000566828 ANKARQ7Z5J8 1434 aa24.1■■□□□ 1.45
EDC3-212ENST00000566828 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
EDC3-212ENST00000566828 SIRT1Q96EB6 747 aa24.09■■□□□ 1.45
EDC3-212ENST00000566828 C14orf93Q9H972 538 aaKnown RBP24.09■■□□□ 1.45
EDC3-212ENST00000566828 KRT27Q7Z3Y8 459 aa24.08■■□□□ 1.45
EDC3-212ENST00000566828 PRAM1Q96QH2 718 aa24.08■■□□□ 1.45
EDC3-212ENST00000566828 A0A0G2JS52 829 aa24.07■■□□□ 1.44
EDC3-212ENST00000566828 MYT1Q01538 1121 aa24.07■■□□□ 1.44
EDC3-212ENST00000566828 ADGRB1O14514 1584 aa24.07■■□□□ 1.44
EDC3-212ENST00000566828 TNS1Q9HBL0 1735 aaKnown RBP24.07■■□□□ 1.44
EDC3-212ENST00000566828 PMFBP1Q8TBY8 1022 aa24.05■■□□□ 1.44
EDC3-212ENST00000566828 ONECUT3O60422 494 aaPredicted RBP24.04■■□□□ 1.44
EDC3-212ENST00000566828 THSD7AQ9UPZ6 1657 aa24.04■■□□□ 1.44
EDC3-212ENST00000566828 FAM83GA6ND36 823 aa24.03■■□□□ 1.44
EDC3-212ENST00000566828 TULP4Q9NRJ4 1543 aa24.03■■□□□ 1.44
EDC3-212ENST00000566828 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
EDC3-212ENST00000566828 PSDA5PKW4 1024 aaPredicted RBP24.01■■□□□ 1.43
EDC3-212ENST00000566828 FAM98CQ17RN3 349 aaKnown RBP24.01■■□□□ 1.43
EDC3-212ENST00000566828 PHRF1Q9P1Y6 1649 aaKnown RBP24■■□□□ 1.43
EDC3-212ENST00000566828 POGKQ9P215 609 aa24■■□□□ 1.43
EDC3-212ENST00000566828 BAG6P46379 1132 aa23.99■■□□□ 1.43
EDC3-212ENST00000566828 BTG4Q9NY30 223 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms