RNA–Protein interactions for RNA: ENST00000566617.1

COX4I1-212, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-212ENST00000566617 TONSLQ96HA7 1378 aa40.74■■■■■ 4.11
COX4I1-212ENST00000566617 TRAK1Q9UPV9 953 aa40.71■■■■■ 4.11
COX4I1-212ENST00000566617 PRAM1Q96QH2 718 aa40.7■■■■■ 4.11
COX4I1-212ENST00000566617 TRPM1Q7Z4N2 1603 aa40.68■■■■■ 4.1
COX4I1-212ENST00000566617 NBPF1Q3BBV0 1214 aa40.68■■■■■ 4.1
COX4I1-212ENST00000566617 POGKQ9P215 609 aa40.66■■■■■ 4.1
COX4I1-212ENST00000566617 ARHGEF28Q8N1W1 1705 aaKnown RBP40.66■■■■■ 4.1
COX4I1-212ENST00000566617 C1orf167Q5SNV9 1468 aa40.64■■■■■ 4.1
COX4I1-212ENST00000566617 BRINP3Q76B58 766 aa40.64■■■■■ 4.1
COX4I1-212ENST00000566617 AHDC1Q5TGY3 1603 aaPredicted RBP40.6■■■■■ 4.09
COX4I1-212ENST00000566617 TIMELESSQ9UNS1 1208 aa40.59■■■■■ 4.09
COX4I1-212ENST00000566617 ADGRB2O60241 1585 aa40.59■■■■■ 4.09
COX4I1-212ENST00000566617 FMN2Q9NZ56 1722 aa40.59■■■■■ 4.09
COX4I1-212ENST00000566617 NBPF8Q3BBV2 869 aa40.58■■■■■ 4.09
COX4I1-212ENST00000566617 PHLPP1O60346 1717 aa40.56■■■■■ 4.08
COX4I1-212ENST00000566617 SAFB2Q14151 953 aaKnown RBP eCLIP40.54■■■■■ 4.08
COX4I1-212ENST00000566617 NHSL1Q5SYE7 1610 aa40.52■■■■■ 4.08
COX4I1-212ENST00000566617 GPRASP1Q5JY77 1395 aa40.51■■■■■ 4.08
COX4I1-212ENST00000566617 ROCK2O75116 1388 aaKnown RBP40.5■■■■■ 4.07
COX4I1-212ENST00000566617 COL16A1Q07092 1604 aaPredicted RBP40.49■■■■■ 4.07
COX4I1-212ENST00000566617 CCER1Q8TC90 406 aaPredicted RBP40.49■■■■■ 4.07
COX4I1-212ENST00000566617 ORAI2Q96SN7 254 aa40.47■■■■■ 4.07
COX4I1-212ENST00000566617 RALGAPBQ86X10 1494 aa40.45■■■■■ 4.07
COX4I1-212ENST00000566617 MINK1Q8N4C8 1332 aaPredicted RBP40.44■■■■■ 4.06
COX4I1-212ENST00000566617 ANKARQ7Z5J8 1434 aa40.42■■■■■ 4.06
COX4I1-212ENST00000566617 ESCO1Q5FWF5 840 aa40.42■■■■■ 4.06
COX4I1-212ENST00000566617 EIF3AQ14152 1382 aaKnown RBP40.42■■■■■ 4.06
COX4I1-212ENST00000566617 WASLO00401 505 aaPredicted RBP40.41■■■■■ 4.06
COX4I1-212ENST00000566617 HIRIP3Q9BW71 556 aaPredicted RBP40.4■■■■■ 4.06
COX4I1-212ENST00000566617 RGPD8O14715 1765 aaPredicted RBP40.4■■■■■ 4.06
COX4I1-212ENST00000566617 CENPJQ9HC77 1338 aaPredicted RBP40.4■■■■■ 4.06
COX4I1-212ENST00000566617 NUTM2FA1L443 756 aa40.37■■■■■ 4.05
COX4I1-212ENST00000566617 KIF1AQ12756 1690 aa40.37■■■■■ 4.05
COX4I1-212ENST00000566617 JCADQ9P266 1359 aa40.36■■■■■ 4.05
COX4I1-212ENST00000566617 USP32Q8NFA0 1604 aa40.36■■■■■ 4.05
COX4I1-212ENST00000566617 TULP4Q9NRJ4 1543 aa40.35■■■■■ 4.05
COX4I1-212ENST00000566617 SOS2Q07890 1332 aaPredicted RBP40.34■■■■■ 4.05
COX4I1-212ENST00000566617 QRICH2Q9H0J4 1663 aa40.33■■■■■ 4.05
COX4I1-212ENST00000566617 LRRC59Q96AG4 307 aaKnown RBP40.32■■■■■ 4.05
COX4I1-212ENST00000566617 CARD11Q9BXL7 1154 aa40.32■■■■■ 4.05
COX4I1-212ENST00000566617 NPHP3Q7Z494 1330 aa40.32■■■■■ 4.04
COX4I1-212ENST00000566617 SHPRHQ149N8 1683 aa40.29■■■■■ 4.04
COX4I1-212ENST00000566617 DDX17Q92841 729 aaKnown RBP40.29■■■■■ 4.04
COX4I1-212ENST00000566617 PHF8Q9UPP1 1060 aa40.28■■■■■ 4.04
COX4I1-212ENST00000566617 CDK19Q9BWU1 502 aa40.26■■■■■ 4.04
COX4I1-212ENST00000566617 PRR36Q9H6K5 1346 aa40.25■■■■■ 4.03
COX4I1-212ENST00000566617 FOXO3O43524 673 aa40.25■■■■■ 4.03
COX4I1-212ENST00000566617 MED1Q15648 1581 aaPredicted RBP40.24■■■■■ 4.03
COX4I1-212ENST00000566617 PXDNQ92626 1479 aa40.24■■■■■ 4.03
COX4I1-212ENST00000566617 ITSN1Q15811 1721 aa40.22■■■■■ 4.03
COX4I1-212ENST00000566617 SPATA31A6Q5VVP1 1343 aa40.21■■■■■ 4.03
COX4I1-212ENST00000566617 ATP7BP35670 1465 aa40.21■■■■■ 4.03
COX4I1-212ENST00000566617 NUDT16Q96DE0 195 aaKnown RBP40.2■■■■■ 4.03
COX4I1-212ENST00000566617 SBNO2Q9Y2G9 1366 aa40.2■■■■■ 4.03
COX4I1-212ENST00000566617 PNPLA6Q8IY17 1366 aa40.14■■■■■ 4.02
COX4I1-212ENST00000566617 CCDC61Q9Y6R9 512 aa40.14■■■■■ 4.02
COX4I1-212ENST00000566617 TOPAZ1Q8N9V7 1692 aa40.14■■■■■ 4.02
COX4I1-212ENST00000566617 EVC2Q86UK5 1308 aa40.14■■■■■ 4.02
COX4I1-212ENST00000566617 PSME1Q06323 249 aa40.11■■■■■ 4.01
COX4I1-212ENST00000566617 KRT28Q7Z3Y7 464 aa40.11■■■■■ 4.01
COX4I1-212ENST00000566617 PMFBP1Q8TBY8 1022 aa40.1■■■■■ 4.01
COX4I1-212ENST00000566617 SRPK2P78362 688 aaKnown RBP40.09■■■■■ 4.01
COX4I1-212ENST00000566617 DISP3Q9P2K9 1392 aa40.09■■■■■ 4.01
COX4I1-212ENST00000566617 COL22A1Q8NFW1 1626 aaPredicted RBP40.08■■■■■ 4.01
COX4I1-212ENST00000566617 PLEKHG3A1L390 1219 aa40.07■■■■■ 4.01
COX4I1-212ENST00000566617 XPCQ01831 940 aaPredicted RBP40.07■■■■■ 4.01
COX4I1-212ENST00000566617 SBNO1A3KN83 1393 aa40.07■■■■■ 4
COX4I1-212ENST00000566617 CABP2Q9NPB3 220 aa40.05■■■■■ 4
COX4I1-212ENST00000566617 SPATA31A3Q5VYP0 1347 aa40.05■■■■■ 4
COX4I1-212ENST00000566617 SLC24A1O60721 1099 aa40.04■■■■■ 4
COX4I1-212ENST00000566617 POLR3AO14802 1390 aaPredicted RBP40.03■■■■■ 4
COX4I1-212ENST00000566617 NGDNQ8NEJ9 315 aaKnown RBP40.02■■■■■ 4
COX4I1-212ENST00000566617 LRP6O75581 1613 aa40.01■■■■■ 4
COX4I1-212ENST00000566617 TRPM3Q9HCF6 1732 aaPredicted RBP39.99■■■■□ 3.99
COX4I1-212ENST00000566617 TNS3Q68CZ2 1445 aa39.99■■■■□ 3.99
COX4I1-212ENST00000566617 ST20-MTHFSA0A0A6YYL1 179 aa39.98■■■■□ 3.99
COX4I1-212ENST00000566617 PPIP5K1Q6PFW1 1433 aa39.98■■■■□ 3.99
COX4I1-212ENST00000566617 USP47Q96K76 1375 aa39.97■■■■□ 3.99
COX4I1-212ENST00000566617 TESK2Q96S53 571 aa39.97■■■■□ 3.99
COX4I1-212ENST00000566617 PUS7Q96PZ0 661 aaKnown RBP39.96■■■■□ 3.99
COX4I1-212ENST00000566617 ACEP12821 1306 aa39.95■■■■□ 3.99
COX4I1-212ENST00000566617 ATAD2Q6PL18 1390 aa39.95■■■■□ 3.99
COX4I1-212ENST00000566617 PHF23Q9BUL5 403 aaPredicted RBP39.93■■■■□ 3.98
COX4I1-212ENST00000566617 ARHGEF10O15013 1369 aa39.93■■■■□ 3.98
COX4I1-212ENST00000566617 NUTM2BA6NNL0 878 aaPredicted RBP39.91■■■■□ 3.98
COX4I1-212ENST00000566617 NUTM2EB1AL46 878 aaPredicted RBP39.91■■■■□ 3.98
COX4I1-212ENST00000566617 NUTM2AQ8IVF1 878 aaPredicted RBP39.91■■■■□ 3.98
COX4I1-212ENST00000566617 ALS2Q96Q42 1657 aa39.91■■■■□ 3.98
COX4I1-212ENST00000566617 CABP1Q9NZU7 370 aa39.9■■■■□ 3.98
COX4I1-212ENST00000566617 BRD4O60885 1362 aaPredicted RBP39.87■■■■□ 3.97
COX4I1-212ENST00000566617 MEX3CQ5U5Q3 659 aaKnown RBP39.86■■■■□ 3.97
COX4I1-212ENST00000566617 RGS17Q9UGC6 210 aaPredicted RBP39.84■■■■□ 3.97
COX4I1-212ENST00000566617 MARF1Q9Y4F3 1742 aaKnown RBP39.8■■■■□ 3.96
COX4I1-212ENST00000566617 ZNF692Q9BU19 519 aaPredicted RBP39.8■■■■□ 3.96
COX4I1-212ENST00000566617 AKAP12Q02952 1782 aa39.78■■■■□ 3.96
COX4I1-212ENST00000566617 LMOD2Q6P5Q4 547 aa39.78■■■■□ 3.96
COX4I1-212ENST00000566617 PAK3O75914 559 aaPredicted RBP39.77■■■■□ 3.96
COX4I1-212ENST00000566617 TMF1P82094 1093 aa39.77■■■■□ 3.96
COX4I1-212ENST00000566617 USP6P35125 1406 aa39.76■■■■□ 3.96
COX4I1-212ENST00000566617 CPSF1Q10570 1443 aaKnown RBP39.75■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms