RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 POGKQ9P215 609 aa37.35■■■■□ 3.57
NME3-209ENST00000566600 SLAIN2Q9P270 581 aa37.35■■■■□ 3.57
NME3-209ENST00000566600 PLEKHH1Q9ULM0 1364 aa37.34■■■■□ 3.57
NME3-209ENST00000566600 PRAM1Q96QH2 718 aa37.34■■■■□ 3.57
NME3-209ENST00000566600 NBPF8Q3BBV2 869 aa37.33■■■■□ 3.57
NME3-209ENST00000566600 ROCK2O75116 1388 aaKnown RBP37.3■■■■□ 3.56
NME3-209ENST00000566600 CDC42BPGQ6DT37 1551 aa37.26■■■■□ 3.56
NME3-209ENST00000566600 ARHGEF28Q8N1W1 1705 aaKnown RBP37.26■■■■□ 3.56
NME3-209ENST00000566600 SAFB2Q14151 953 aaKnown RBP eCLIP37.24■■■■□ 3.55
NME3-209ENST00000566600 RALGAPBQ86X10 1494 aa37.24■■■■□ 3.55
NME3-209ENST00000566600 MST1RQ04912 1400 aa37.23■■■■□ 3.55
NME3-209ENST00000566600 GPRASP1Q5JY77 1395 aa37.22■■■■□ 3.55
NME3-209ENST00000566600 ROBO1Q9Y6N7 1651 aa37.2■■■■□ 3.55
NME3-209ENST00000566600 ADGRB2O60241 1585 aa37.16■■■■□ 3.54
NME3-209ENST00000566600 CARD11Q9BXL7 1154 aa37.15■■■■□ 3.54
NME3-209ENST00000566600 C1orf167Q5SNV9 1468 aa37.14■■■■□ 3.54
NME3-209ENST00000566600 EIF3AQ14152 1382 aaKnown RBP37.14■■■■□ 3.54
NME3-209ENST00000566600 MINK1Q8N4C8 1332 aaPredicted RBP37.13■■■■□ 3.54
NME3-209ENST00000566600 CENPJQ9HC77 1338 aaPredicted RBP37.12■■■■□ 3.53
NME3-209ENST00000566600 HSPA1LP34931 641 aa37.11■■■■□ 3.53
NME3-209ENST00000566600 FMN2Q9NZ56 1722 aa37.1■■■■□ 3.53
NME3-209ENST00000566600 BRINP3Q76B58 766 aa37.1■■■■□ 3.53
NME3-209ENST00000566600 HIRIP3Q9BW71 556 aaPredicted RBP37.08■■■■□ 3.53
NME3-209ENST00000566600 WASLO00401 505 aaPredicted RBP37.05■■■■□ 3.52
NME3-209ENST00000566600 QRICH2Q9H0J4 1663 aa37.02■■■■□ 3.52
NME3-209ENST00000566600 NUTM2FA1L443 756 aa37.02■■■■□ 3.52
NME3-209ENST00000566600 ESCO1Q5FWF5 840 aa37.01■■■■□ 3.52
NME3-209ENST00000566600 ANKARQ7Z5J8 1434 aa37.01■■■■□ 3.51
NME3-209ENST00000566600 ORAI2Q96SN7 254 aa37■■■■□ 3.51
NME3-209ENST00000566600 AHDC1Q5TGY3 1603 aaPredicted RBP36.99■■■■□ 3.51
NME3-209ENST00000566600 PHLPP1O60346 1717 aa36.97■■■■□ 3.51
NME3-209ENST00000566600 TULP4Q9NRJ4 1543 aa36.96■■■■□ 3.51
NME3-209ENST00000566600 CDK19Q9BWU1 502 aa36.95■■■■□ 3.51
NME3-209ENST00000566600 NHSL1Q5SYE7 1610 aa36.94■■■■□ 3.5
NME3-209ENST00000566600 SBNO2Q9Y2G9 1366 aa36.91■■■■□ 3.5
NME3-209ENST00000566600 KIF1AQ12756 1690 aa36.9■■■■□ 3.5
NME3-209ENST00000566600 USP32Q8NFA0 1604 aa36.9■■■■□ 3.5
NME3-209ENST00000566600 RGPD8O14715 1765 aaPredicted RBP36.9■■■■□ 3.5
NME3-209ENST00000566600 EVC2Q86UK5 1308 aa36.89■■■■□ 3.5
NME3-209ENST00000566600 COL16A1Q07092 1604 aaPredicted RBP36.88■■■■□ 3.5
NME3-209ENST00000566600 PHF8Q9UPP1 1060 aa36.88■■■■□ 3.49
NME3-209ENST00000566600 NPHP3Q7Z494 1330 aa36.87■■■■□ 3.49
NME3-209ENST00000566600 PRR36Q9H6K5 1346 aa36.86■■■■□ 3.49
NME3-209ENST00000566600 SRPK2P78362 688 aaKnown RBP36.86■■■■□ 3.49
NME3-209ENST00000566600 NUDT16Q96DE0 195 aaKnown RBP36.86■■■■□ 3.49
NME3-209ENST00000566600 USP47Q96K76 1375 aa36.86■■■■□ 3.49
NME3-209ENST00000566600 ATP7BP35670 1465 aa36.84■■■■□ 3.49
NME3-209ENST00000566600 SLC24A1O60721 1099 aa36.84■■■■□ 3.49
NME3-209ENST00000566600 ITSN1Q15811 1721 aa36.83■■■■□ 3.49
NME3-209ENST00000566600 FOXO3O43524 673 aa36.83■■■■□ 3.49
NME3-209ENST00000566600 DDX17Q92841 729 aaKnown RBP36.83■■■■□ 3.49
NME3-209ENST00000566600 ST20-MTHFSA0A0A6YYL1 179 aa36.81■■■■□ 3.48
NME3-209ENST00000566600 LRRC59Q96AG4 307 aaKnown RBP36.81■■■■□ 3.48
NME3-209ENST00000566600 SOS2Q07890 1332 aaPredicted RBP36.81■■■■□ 3.48
NME3-209ENST00000566600 CCDC61Q9Y6R9 512 aa36.8■■■■□ 3.48
NME3-209ENST00000566600 JCADQ9P266 1359 aa36.79■■■■□ 3.48
NME3-209ENST00000566600 CABP2Q9NPB3 220 aa36.79■■■■□ 3.48
NME3-209ENST00000566600 PMFBP1Q8TBY8 1022 aa36.77■■■■□ 3.48
NME3-209ENST00000566600 TOPAZ1Q8N9V7 1692 aa36.74■■■■□ 3.47
NME3-209ENST00000566600 PXDNQ92626 1479 aa36.74■■■■□ 3.47
NME3-209ENST00000566600 TESK2Q96S53 571 aa36.73■■■■□ 3.47
NME3-209ENST00000566600 PSME1Q06323 249 aa36.72■■■■□ 3.47
NME3-209ENST00000566600 NGDNQ8NEJ9 315 aaKnown RBP36.72■■■■□ 3.47
NME3-209ENST00000566600 KRT28Q7Z3Y7 464 aa36.71■■■■□ 3.47
NME3-209ENST00000566600 PLEKHG3A1L390 1219 aa36.7■■■■□ 3.47
NME3-209ENST00000566600 ATAD2Q6PL18 1390 aa36.69■■■■□ 3.46
NME3-209ENST00000566600 XPCQ01831 940 aaPredicted RBP36.69■■■■□ 3.46
NME3-209ENST00000566600 SHPRHQ149N8 1683 aa36.69■■■■□ 3.46
NME3-209ENST00000566600 PPIP5K1Q6PFW1 1433 aa36.68■■■■□ 3.46
NME3-209ENST00000566600 EIF4G2P78344 907 aaKnown RBP eCLIP36.67■■■■□ 3.46
NME3-209ENST00000566600 PUS7Q96PZ0 661 aaKnown RBP36.67■■■■□ 3.46
NME3-209ENST00000566600 POLR3AO14802 1390 aaPredicted RBP36.65■■■■□ 3.46
NME3-209ENST00000566600 SPATA31A6Q5VVP1 1343 aa36.64■■■■□ 3.46
NME3-209ENST00000566600 TMF1P82094 1093 aa36.64■■■■□ 3.46
NME3-209ENST00000566600 SBNO1A3KN83 1393 aa36.63■■■■□ 3.45
NME3-209ENST00000566600 ACEP12821 1306 aa36.62■■■■□ 3.45
NME3-209ENST00000566600 CABP1Q9NZU7 370 aa36.62■■■■□ 3.45
NME3-209ENST00000566600 PNPLA6Q8IY17 1366 aa36.62■■■■□ 3.45
NME3-209ENST00000566600 SPATA31A3Q5VYP0 1347 aa36.6■■■■□ 3.45
NME3-209ENST00000566600 CDCA8Q53HL2 280 aa36.58■■■■□ 3.45
NME3-209ENST00000566600 TNS3Q68CZ2 1445 aa36.58■■■■□ 3.45
NME3-209ENST00000566600 HSPA5P11021 654 aaKnown RBP36.56■■■■□ 3.44
NME3-209ENST00000566600 MED1Q15648 1581 aaPredicted RBP36.54■■■■□ 3.44
NME3-209ENST00000566600 TRPM3Q9HCF6 1732 aaPredicted RBP36.54■■■■□ 3.44
NME3-209ENST00000566600 ARHGEF10O15013 1369 aa36.53■■■■□ 3.44
NME3-209ENST00000566600 DISP3Q9P2K9 1392 aa36.53■■■■□ 3.44
NME3-209ENST00000566600 COL22A1Q8NFW1 1626 aaPredicted RBP36.53■■■■□ 3.44
NME3-209ENST00000566600 BRD4O60885 1362 aaPredicted RBP36.52■■■■□ 3.44
NME3-209ENST00000566600 ZNF692Q9BU19 519 aaPredicted RBP36.51■■■■□ 3.44
NME3-209ENST00000566600 NINLQ9Y2I6 1382 aa36.5■■■■□ 3.43
NME3-209ENST00000566600 PAK3O75914 559 aaPredicted RBP36.49■■■■□ 3.43
NME3-209ENST00000566600 LMOD2Q6P5Q4 547 aa36.49■■■■□ 3.43
NME3-209ENST00000566600 TMC1Q8TDI8 760 aa36.49■■■■□ 3.43
NME3-209ENST00000566600 NUTM2BA6NNL0 878 aaPredicted RBP36.47■■■■□ 3.43
NME3-209ENST00000566600 NUTM2EB1AL46 878 aaPredicted RBP36.47■■■■□ 3.43
NME3-209ENST00000566600 NUTM2AQ8IVF1 878 aaPredicted RBP36.47■■■■□ 3.43
NME3-209ENST00000566600 ALS2Q96Q42 1657 aa36.45■■■■□ 3.42
NME3-209ENST00000566600 USP6P35125 1406 aa36.44■■■■□ 3.42
NME3-209ENST00000566600 CPSF1Q10570 1443 aaKnown RBP36.43■■■■□ 3.42
NME3-209ENST00000566600 TERF2IPQ9NYB0 399 aa36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms