RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
LINC01541-201ENST00000566582 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
LINC01541-201ENST00000566582 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
LINC01541-201ENST00000566582 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
LINC01541-201ENST00000566582 PUS7Q96PZ0 661 aaKnown RBP11.58□□□□□ -0.56
LINC01541-201ENST00000566582 CCDC136Q96JN2 1154 aa11.58□□□□□ -0.56
LINC01541-201ENST00000566582 YTHDC2Q9H6S0 1430 aaKnown RBP11.58□□□□□ -0.56
LINC01541-201ENST00000566582 TULP4Q9NRJ4 1543 aa11.57□□□□□ -0.56
LINC01541-201ENST00000566582 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
LINC01541-201ENST00000566582 ZMYM3Q14202 1370 aa11.56□□□□□ -0.56
LINC01541-201ENST00000566582 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
LINC01541-201ENST00000566582 ANKRD36BQ8N2N9 1353 aa11.56□□□□□ -0.56
LINC01541-201ENST00000566582 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
LINC01541-201ENST00000566582 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
LINC01541-201ENST00000566582 A2ML1A8K2U0 1454 aa11.56□□□□□ -0.56
LINC01541-201ENST00000566582 APAF1O14727 1248 aa11.55□□□□□ -0.56
LINC01541-201ENST00000566582 PTPRMP28827 1452 aa11.54□□□□□ -0.56
LINC01541-201ENST00000566582 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
LINC01541-201ENST00000566582 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
LINC01541-201ENST00000566582 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC01541-201ENST00000566582 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
LINC01541-201ENST00000566582 POLR3AO14802 1390 aaPredicted RBP11.53□□□□□ -0.56
LINC01541-201ENST00000566582 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
LINC01541-201ENST00000566582 TERF2IPQ9NYB0 399 aa11.53□□□□□ -0.56
LINC01541-201ENST00000566582 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
LINC01541-201ENST00000566582 MTHFSP49914 203 aa11.52□□□□□ -0.56
LINC01541-201ENST00000566582 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.56
LINC01541-201ENST00000566582 CDK19Q9BWU1 502 aa11.52□□□□□ -0.56
LINC01541-201ENST00000566582 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.56
LINC01541-201ENST00000566582 A0A1W2PP64 1363 aa11.52□□□□□ -0.57
LINC01541-201ENST00000566582 WAPLQ7Z5K2 1190 aa11.51□□□□□ -0.57
LINC01541-201ENST00000566582 PLIN1O60240 522 aa11.51□□□□□ -0.57
LINC01541-201ENST00000566582 HDGFL2Q7Z4V5 671 aaPredicted RBP11.51□□□□□ -0.57
LINC01541-201ENST00000566582 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
LINC01541-201ENST00000566582 NSD2O96028 1365 aa11.51□□□□□ -0.57
LINC01541-201ENST00000566582 TNRQ92752 1358 aa11.51□□□□□ -0.57
LINC01541-201ENST00000566582 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
LINC01541-201ENST00000566582 GGNBP2Q9H3C7 697 aa11.5□□□□□ -0.57
LINC01541-201ENST00000566582 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
LINC01541-201ENST00000566582 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
LINC01541-201ENST00000566582 ZNF521Q96K83 1311 aa11.49□□□□□ -0.57
LINC01541-201ENST00000566582 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
LINC01541-201ENST00000566582 CABP1Q9NZU7 370 aa11.49□□□□□ -0.57
LINC01541-201ENST00000566582 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
LINC01541-201ENST00000566582 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
LINC01541-201ENST00000566582 SLFN5Q08AF3 891 aa11.48□□□□□ -0.57
LINC01541-201ENST00000566582 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
LINC01541-201ENST00000566582 TXNDC2Q86VQ3 553 aa11.47□□□□□ -0.57
LINC01541-201ENST00000566582 U2AF1L5P0DN76 240 aaPredicted RBP11.47□□□□□ -0.57
LINC01541-201ENST00000566582 U2AF1Q01081 240 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01541-201ENST00000566582 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
LINC01541-201ENST00000566582 METP08581 1390 aa11.46□□□□□ -0.57
LINC01541-201ENST00000566582 E9PSI1 815 aa11.46□□□□□ -0.57
LINC01541-201ENST00000566582 FYB1O15117 783 aa11.46□□□□□ -0.57
LINC01541-201ENST00000566582 CEBPAP49715 358 aaPredicted RBP11.46□□□□□ -0.57
LINC01541-201ENST00000566582 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.46□□□□□ -0.58
LINC01541-201ENST00000566582 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.58
LINC01541-201ENST00000566582 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.58
LINC01541-201ENST00000566582 DLC1Q96QB1 1528 aa11.46□□□□□ -0.58
LINC01541-201ENST00000566582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC01541-201ENST00000566582 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
LINC01541-201ENST00000566582 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
LINC01541-201ENST00000566582 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
LINC01541-201ENST00000566582 WWC1Q8IX03 1113 aa11.45□□□□□ -0.58
LINC01541-201ENST00000566582 TCP11L2Q8N4U5 519 aa11.45□□□□□ -0.58
LINC01541-201ENST00000566582 TMEM2Q9UHN6 1383 aa11.44□□□□□ -0.58
LINC01541-201ENST00000566582 CRBNQ96SW2 442 aa11.44□□□□□ -0.58
LINC01541-201ENST00000566582 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
LINC01541-201ENST00000566582 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
LINC01541-201ENST00000566582 CD163L1Q9NR16 1453 aa11.43□□□□□ -0.58
LINC01541-201ENST00000566582 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
LINC01541-201ENST00000566582 NKTRP30414 1462 aaKnown RBP11.43□□□□□ -0.58
LINC01541-201ENST00000566582 NRXN3Q9Y4C0 1643 aa11.43□□□□□ -0.58
LINC01541-201ENST00000566582 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
LINC01541-201ENST00000566582 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
LINC01541-201ENST00000566582 PPM1GO15355 546 aaPredicted RBP11.42□□□□□ -0.58
LINC01541-201ENST00000566582 C20orf194Q5TEA3 1177 aa11.42□□□□□ -0.58
LINC01541-201ENST00000566582 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
LINC01541-201ENST00000566582 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
LINC01541-201ENST00000566582 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
LINC01541-201ENST00000566582 LTKP29376 864 aa11.4□□□□□ -0.58
LINC01541-201ENST00000566582 NUDT16Q96DE0 195 aaKnown RBP11.4□□□□□ -0.58
LINC01541-201ENST00000566582 ATP7BP35670 1465 aa11.4□□□□□ -0.58
LINC01541-201ENST00000566582 NLRP1Q9C000 1473 aa11.4□□□□□ -0.58
LINC01541-201ENST00000566582 MED14O60244 1454 aa11.39□□□□□ -0.59
LINC01541-201ENST00000566582 MAPK8IP3Q9UPT6 1336 aa11.39□□□□□ -0.59
LINC01541-201ENST00000566582 SLC26A8Q96RN1 970 aa11.39□□□□□ -0.59
LINC01541-201ENST00000566582 FAM135BQ49AJ0 1406 aa11.39□□□□□ -0.59
LINC01541-201ENST00000566582 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
LINC01541-201ENST00000566582 BCAR3O75815 825 aa11.39□□□□□ -0.59
LINC01541-201ENST00000566582 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
LINC01541-201ENST00000566582 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
LINC01541-201ENST00000566582 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
LINC01541-201ENST00000566582 SIRT1Q96EB6 747 aa11.38□□□□□ -0.59
LINC01541-201ENST00000566582 ANKRD26Q9UPS8 1709 aa11.38□□□□□ -0.59
LINC01541-201ENST00000566582 WDR63Q8IWG1 891 aa11.38□□□□□ -0.59
LINC01541-201ENST00000566582 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
LINC01541-201ENST00000566582 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
LINC01541-201ENST00000566582 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
LINC01541-201ENST00000566582 TECPR2O15040 1411 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms